mRNA_P-wetherbeei_contig5276.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5276.4.1 vs. uniprot
Match: A0A3C0TUE0_9PROT (Short chain dehydrogenase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TUE0_9PROT) HSP 1 Score: 224 bits (571), Expect = 7.140e-72 Identity = 110/129 (85.27%), Postives = 118/129 (91.47%), Query Frame = 1
Query: 1 ASQHPHAQTGNVINIMDQRVWRLTPRYISYTLSKSALWTLTQTMAMALAPAIRVNGVGPGPTLPNEYQDEAQFARQAGSTILGRGAGLEEISAAVRFILASPSMTGQMIALDGGQHLAWETPDILGMED 387
A Q P GNVINI+DQRVWRLTPRY+SYTLSKSALWTLT+TMAMALAP IRVNG+GPGPTLPN+ QD AQFARQAGSTIL RGAGL+EI+AA RFILASPSMTGQMIALDGGQHLAWETPDI+GMED
Sbjct: 131 ARQLPKGAQGNVINILDQRVWRLTPRYLSYTLSKSALWTLTRTMAMALAPVIRVNGIGPGPTLPNDQQDAAQFARQAGSTILRRGAGLDEIAAAARFILASPSMTGQMIALDGGQHLAWETPDIVGMED 259
BLAST of mRNA_P-wetherbeei_contig5276.4.1 vs. uniprot
Match: A0A2A5EU54_9HYPH (Short chain dehydrogenase n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2A5EU54_9HYPH) HSP 1 Score: 190 bits (482), Expect = 2.310e-58 Identity = 90/124 (72.58%), Postives = 105/124 (84.68%), Query Frame = 1
Query: 13 PHAQTGNVINIMDQRVWRLTPRYISYTLSKSALWTLTQTMAMALAPAIRVNGVGPGPTLPNEYQDEAQFARQAGSTILGRGAGLEEISAAVRFILASPSMTGQMIALDGGQHLAWETPDILGME 384
P +GN+IN++DQRVWRLTPR++SYT++KS LWTLTQT+A ALAP IRVNG+GPGPTL N+ Q E F QA +T+LGRG LEEI AAVRFILASP+MTGQMIALDGGQHLAWETPD +G E
Sbjct: 137 PEGTSGNIINMIDQRVWRLTPRFLSYTVAKSGLWTLTQTLAQALAPKIRVNGIGPGPTLCNDRQSETDFQAQAAATLLGRGPELEEICAAVRFILASPAMTGQMIALDGGQHLAWETPDAVGPE 260
BLAST of mRNA_P-wetherbeei_contig5276.4.1 vs. uniprot
Match: A0A2Z4UKA5_9HYPH (3-oxoacyl-[acyl-carrier-protein] reductase FabG n=2 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2Z4UKA5_9HYPH) HSP 1 Score: 186 bits (471), Expect = 8.940e-57 Identity = 90/128 (70.31%), Postives = 103/128 (80.47%), Query Frame = 1
Query: 1 ASQHPHAQTGNVINIMDQRVWRLTPRYISYTLSKSALWTLTQTMAMALAPAIRVNGVGPGPTLPNEYQDEAQFARQAGSTILGRGAGLEEISAAVRFILASPSMTGQMIALDGGQHLAWETPDILGME 384
A Q P + GN+INI+DQRVWRLTPR++SYT SK+ LWTLTQT+A ALAP IRVNG+GPGPTL N+ Q A F QA ST+L R +EEI AAVRFILASP+MTGQMIALD GQHLAWETPD +G E
Sbjct: 127 AKQLPESNAGNIINIIDQRVWRLTPRFLSYTASKAGLWTLTQTLAQALAPKIRVNGIGPGPTLSNDRQSSADFEAQATSTLLQRQISMEEICAAVRFILASPAMTGQMIALDSGQHLAWETPDAIGPE 254
BLAST of mRNA_P-wetherbeei_contig5276.4.1 vs. uniprot
Match: A0A081BD53_9HYPH (Short-chain dehydrogenase/reductase SDR n=1 Tax=Tepidicaulis marinus TaxID=1333998 RepID=A0A081BD53_9HYPH) HSP 1 Score: 185 bits (470), Expect = 1.310e-56 Identity = 87/129 (67.44%), Postives = 106/129 (82.17%), Query Frame = 1
Query: 1 ASQHPHAQTGNVINIMDQRVWRLTPRYISYTLSKSALWTLTQTMAMALAPAIRVNGVGPGPTLPNEYQDEAQFARQAGSTILGRGAGLEEISAAVRFILASPSMTGQMIALDGGQHLAWETPDILGMED 387
A+Q P GN+INI+DQRVWRLTPR+ SYTLSK+ LWT+TQT+A ALAP IRVNG+GPGPTL N Q++A F RQ + +L RG L EI+AA+RFIL SPS+TGQMIALDGGQHLAWETPD++G+ +
Sbjct: 127 AAQLPDGAQGNIINIIDQRVWRLTPRFFSYTLSKAGLWTMTQTLAQALAPRIRVNGIGPGPTLKNARQEDADFTRQQEALLLRRGPALGEITAAIRFILESPSLTGQMIALDGGQHLAWETPDVVGIPE 255
BLAST of mRNA_P-wetherbeei_contig5276.4.1 vs. uniprot
Match: A0A2D8XG93_9HYPH (Short chain dehydrogenase n=1 Tax=Parvibaculum sp. TaxID=2024848 RepID=A0A2D8XG93_9HYPH) HSP 1 Score: 181 bits (458), Expect = 8.310e-55 Identity = 88/128 (68.75%), Postives = 101/128 (78.91%), Query Frame = 1
Query: 1 ASQHPHAQTGNVINIMDQRVWRLTPRYISYTLSKSALWTLTQTMAMALAPAIRVNGVGPGPTLPNEYQDEAQFARQAGSTILGRGAGLEEISAAVRFILASPSMTGQMIALDGGQHLAWETPDILGME 384
A Q P + +GN+INI+DQRVWRLTPR++SYT SK+ LWTLTQT+A +LAP IRVNG+GPGPTL N+ Q A F Q ST L R EEI AAVRFILASP+MTGQMIALD GQHLAWETPD +G E
Sbjct: 127 AKQLPESNSGNIINIIDQRVWRLTPRFLSYTTSKAGLWTLTQTLAQSLAPKIRVNGIGPGPTLSNDRQSNADFQAQVASTPLQRQISTEEIRAAVRFILASPAMTGQMIALDSGQHLAWETPDAVGPE 254
BLAST of mRNA_P-wetherbeei_contig5276.4.1 vs. uniprot
Match: A0A2N3E0Y1_9PROT (Short-chain dehydrogenase (Fragment) n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-12 TaxID=2013658 RepID=A0A2N3E0Y1_9PROT) HSP 1 Score: 177 bits (450), Expect = 9.760e-55 Identity = 85/129 (65.89%), Postives = 101/129 (78.29%), Query Frame = 1
Query: 1 ASQHPHAQTGNVINIMDQRVWRLTPRYISYTLSKSALWTLTQTMAMALAPAIRVNGVGPGPTLPNEYQDEAQFARQAGSTILGRGAGLEEISAAVRFILASPSMTGQMIALDGGQHLAWETPDILGMED 387
A+Q P GN++NI+DQRVW TPR+ SYT+SK ALW +TQ MA +LAP IRVNG+GPGPTL N Q A F RQ +TILGRG EEI A+RFILASP+MTGQMIALDGGQHLAWETPD++G+ +
Sbjct: 40 AAQLPAGIEGNIVNIVDQRVWAPTPRFFSYTISKMALWDMTQVMARSLAPRIRVNGIGPGPTLANARQSAADFERQTRATILGRGTTPEEICTALRFILASPAMTGQMIALDGGQHLAWETPDVIGISE 168
BLAST of mRNA_P-wetherbeei_contig5276.4.1 vs. uniprot
Match: A0A836TQ82_9PROT (SDR family oxidoreductase n=1 Tax=Sneathiellales bacterium TaxID=2528251 RepID=A0A836TQ82_9PROT) HSP 1 Score: 180 bits (457), Expect = 1.180e-54 Identity = 86/117 (73.50%), Postives = 104/117 (88.89%), Query Frame = 1
Query: 19 AQTGNVINIMDQRVWRLTPRYISYTLSKSALWTLTQTMAMALAPAIRVNGVGPGPTLPNEYQDEAQFARQAGSTILGRGAGLEEISAAVRFILASPSMTGQMIALDGGQHLAWETPD 369
A GNVINI+DQRVW+LTP ++SYT+SK+ALWTLTQT+AMALAP IRVNGVGPGPTLP+ Q +AQFA+Q ST+L RGA EEI AA++FIL++PSMTGQMIALDGGQHLAW++P+
Sbjct: 132 ADGGNVINILDQRVWKLTPFFLSYTVSKAALWTLTQTLAMALAPGIRVNGVGPGPTLPSPRQTDAQFAQQCASTLLQRGASPEEICAAIQFILSTPSMTGQMIALDGGQHLAWQSPE 248
BLAST of mRNA_P-wetherbeei_contig5276.4.1 vs. uniprot
Match: A7HVF9_PARL1 (Short-chain dehydrogenase/reductase SDR n=2 Tax=Parvibaculum lavamentivorans TaxID=256618 RepID=A7HVF9_PARL1) HSP 1 Score: 179 bits (455), Expect = 2.510e-54 Identity = 85/129 (65.89%), Postives = 103/129 (79.84%), Query Frame = 1
Query: 1 ASQHPHAQTGNVINIMDQRVWRLTPRYISYTLSKSALWTLTQTMAMALAPAIRVNGVGPGPTLPNEYQDEAQFARQAGSTILGRGAGLEEISAAVRFILASPSMTGQMIALDGGQHLAWETPDILGMED 387
A+Q P GN++NI+DQRVW TP+++SYTLSK ALW +TQ +A +LAP IRVNG+GPGPTL N+ Q A F RQ STILGRG EEI AA+RFILA+P+MTGQMIALDGGQHLAWETPD+ G+ +
Sbjct: 128 AAQLPAGAKGNIVNIIDQRVWAPTPKFLSYTLSKMALWDMTQVLARSLAPHIRVNGIGPGPTLANQRQSAADFERQTASTILGRGTTPEEICAALRFILAAPAMTGQMIALDGGQHLAWETPDVTGISE 256
BLAST of mRNA_P-wetherbeei_contig5276.4.1 vs. uniprot
Match: A0A353LSQ4_9PROT (Short chain dehydrogenase (Fragment) n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A353LSQ4_9PROT) HSP 1 Score: 176 bits (446), Expect = 8.150e-54 Identity = 86/129 (66.67%), Postives = 100/129 (77.52%), Query Frame = 1
Query: 1 ASQHPHAQTGNVINIMDQRVWRLTPRYISYTLSKSALWTLTQTMAMALAPAIRVNGVGPGPTLPNEYQDEAQFARQAGSTILGRGAGLEEISAAVRFILASPSMTGQMIALDGGQHLAWETPDILGMED 387
A+Q P GNVINI+DQRVWRLTPR+ SYTLSK+ LWT+TQT A ALAP IRVN + PGPTL N Q FA Q + +L +GA LEE AAVRFILA+ SMTGQMIALDGGQHLAWETPD+ G+++
Sbjct: 63 AAQLPEPMRGNVINIIDQRVWRLTPRFFSYTLSKAGLWTMTQTAAQALAPRIRVNAIAPGPTLRNARQSAEDFAAQEKNVLLQQGAALEEFGAAVRFILAAQSMTGQMIALDGGQHLAWETPDVHGLDE 191
BLAST of mRNA_P-wetherbeei_contig5276.4.1 vs. uniprot
Match: A0A2E5BTJ2_9HYPH (Short chain dehydrogenase n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2E5BTJ2_9HYPH) HSP 1 Score: 177 bits (449), Expect = 1.860e-53 Identity = 84/127 (66.14%), Postives = 100/127 (78.74%), Query Frame = 1
Query: 4 SQHPHAQTGNVINIMDQRVWRLTPRYISYTLSKSALWTLTQTMAMALAPAIRVNGVGPGPTLPNEYQDEAQFARQAGSTILGRGAGLEEISAAVRFILASPSMTGQMIALDGGQHLAWETPDILGME 384
+Q P Q GN+IN++DQRVWRLTPR++SYT SK+ LWTLTQT+A LAP +RVN +GPGP L NE Q EA F Q +T+L RG L+EI A+RFILA+PSMTGQMIALDGGQHLAW TPD +G E
Sbjct: 127 NQLPRHQKGNIINLIDQRVWRLTPRFLSYTASKAGLWTLTQTLAQGLAPHVRVNAIGPGPVLTNERQKEADFEAQVKATLLQRGPELDEICQAIRFILAAPSMTGQMIALDGGQHLAWATPDAIGPE 253 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5276.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5276.4.1 >prot_P-wetherbeei_contig5276.4.1 ID=prot_P-wetherbeei_contig5276.4.1|Name=mRNA_P-wetherbeei_contig5276.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=130bp ASQHPHAQTGNVINIMDQRVWRLTPRYISYTLSKSALWTLTQTMAMALAPback to top mRNA from alignment at P-wetherbeei_contig5276:3540..3929- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5276.4.1 ID=mRNA_P-wetherbeei_contig5276.4.1|Name=mRNA_P-wetherbeei_contig5276.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=390bp|location=Sequence derived from alignment at P-wetherbeei_contig5276:3540..3929- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5276:3540..3929- >mRNA_P-wetherbeei_contig5276.4.1 ID=mRNA_P-wetherbeei_contig5276.4.1|Name=mRNA_P-wetherbeei_contig5276.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=390bp|location=Sequence derived from alignment at P-wetherbeei_contig5276:3540..3929- (Phaeothamnion wetherbeei SAG_119_79)back to top |