mRNA_P-wetherbeei_contig5276.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5276.2.1
Unique NamemRNA_P-wetherbeei_contig5276.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5276.2.1 vs. uniprot
Match: A0A3B9BFX6_9PROT (Excinuclease ABC subunit C (Fragment) n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3B9BFX6_9PROT)

HSP 1 Score: 847 bits (2187), Expect = 1.420e-303
Identity = 423/616 (68.67%), Postives = 509/616 (82.63%), Query Frame = 1
Query:   25 GHSDATRTGPDVIRAYLRQLPNRPGVYRMLGARGDVLYVGKARSLKKRVSSYAKLTGHGVRIGRMIQATATMEFISTQTETEALLLEANLIKRLKPYYNVLLRDDKSFPYILLTA-HDFPRLDKHRGARSREGEYFGPFANAGAVTRTLNTMQKAFLLRSCADGVFENRTRPCLLHQIKRCSAPCTGQIDAPAYKMLVEQARDFLTGGGAEARIRLTTEMEEAAEALDFERAASFRDRIRAMSAVQAHQGINPQGLLEADVFSVHQDSGQTCIQVFFFRAGQNWGNRAYFPRADKSLNEAEILGPFLAQFYDNKPPPRLLLLSHPAEDMALIAEALGTRTGHKIEIAVPRRGEKFDLVQHALRNAQEALERKLTETASQTKLLQGVADQFGLDAPPQRIEVYDNSHVQGTNAVGAMIVAGPNGFEKAQYRKFNIRNADLTPGDDYGMLREVLQRRFQRLLREDPGQDLGHWPDLLLIDGGAGQLSSAVQVLADLEITNVPLVAISKGPDRNAGQEQFHIPGKPVRSLEPRDPVLFFLQRLRDEAHRFAIGAHRDKRARAATASPLDEMAGIGPRRKRALLNHFGSARAVAQAGLNDLEAVPGISAAMAKQIYTYFH 1869
            G      TGP +IR Y+R+LPN PGVYRM+ AR +VLYVGKAR+LKKRV++Y KL G   RIGRMI ATA MEFI+T+TETEALLLEANLIKRLKP YNVLLRDDKSFPYIL+   HDFP+++K+RGA+S+ G+Y+GPFA+AGAV  TLN++QKAFLLRSC+D VF+NRTRPCLLHQIKRCSAPC G ID   Y  LV QA++FLTGG  E R +LT  M+ A+ ALDFE+AA +RDRIRA+SAVQAHQGINP  + EADVF+V Q  GQTCIQ+FFFR+GQNWGNRAYFPRAD+SL  +EIL  F+ QFYDNKPPP LLLLSHP ++  L+ EAL  R G K++++VP RGEK  LV HAL NA+EALERKL E+ASQ KLL+G+AD   L APPQRIEVYDNSH+QGT+ VGAMIVAGP+GF+KAQYRKFNIR+ D+TPGDDY M+REVL RRF+RLLR+  G +    PDL++IDGGAGQL+ A  +LA+L +  + L+A+SKGPDR+AG+E+FH+PGKP  SLEPR PVL+FLQRLRDEAHRFAIG+HR +R  A   SPLD + GIGP+RKRALLNHFGSA+ V++AGL DL+AVPGISAA A++IY +F+
Sbjct:    5 GSDKPPHTGPALIRDYVRRLPNAPGVYRMMSARDEVLYVGKARNLKKRVANYGKLAGQPARIGRMILATAAMEFITTETETEALLLEANLIKRLKPRYNVLLRDDKSFPYILVRRDHDFPQIEKYRGAQSQPGDYYGPFASAGAVNSTLNSLQKAFLLRSCSDSVFQNRTRPCLLHQIKRCSAPCVGLIDKDGYAALVTQAQEFLTGGAQELRDKLTAAMQAASAALDFEQAALYRDRIRALSAVQAHQGINPGIVREADVFAVCQQGGQTCIQLFFFRSGQNWGNRAYFPRADRSLPISEILSAFIGQFYDNKPPPGLLLLSHPVDEAELLTEALSIRAGRKVKLSVPERGEKKALVAHALNNAREALERKLAESASQEKLLRGLADSLDLPAPPQRIEVYDNSHIQGTHPVGAMIVAGPDGFQKAQYRKFNIRDTDMTPGDDYAMMREVLTRRFRRLLRDSKGDNPPQRPDLVIIDGGAGQLNVARDILAELGLAEIALLAVSKGPDRDAGRERFHLPGKPAFSLEPRHPVLYFLQRLRDEAHRFAIGSHRTRRKGAVATSPLDAIDGIGPKRKRALLNHFGSAKDVSRAGLTDLKAVPGISAAAAQRIYDHFN 620          
BLAST of mRNA_P-wetherbeei_contig5276.2.1 vs. uniprot
Match: UPI0012E12A23 (excinuclease ABC subunit UvrC n=1 Tax=Oceanobacillus sp. HTM 045 TaxID=2676312 RepID=UPI0012E12A23)

HSP 1 Score: 812 bits (2097), Expect = 9.400e-290
Identity = 403/611 (65.96%), Postives = 490/611 (80.20%), Query Frame = 1
Query:   34 DATRTGPDVIRAYLRQLPNRPGVYRMLGARGDVLYVGKARSLKKRVSSYAKLTGHGVRIGRMIQATATMEFISTQTETEALLLEANLIKRLKPYYNVLLRDDKSFPYILLTAHDFPRLDKHRGARSREGEYFGPFANAGAVTRTLNTMQKAFLLRSCADGVFENRTRPCLLHQIKRCSAPCTGQIDAPAYKMLVEQARDFLTGGGAEARIRLTTEMEEAAEALDFERAASFRDRIRAMSAVQAHQGINPQGLLEADVFSVHQDSGQTCIQVFFFRAGQNWGNRAYFPRADKSLNEAEILGPFLAQFYDNKPPPRLLLLSHPAEDMALIAEALGTRTGHKIEIAVPRRGEKFDLVQHALRNAQEALERKLTETASQTKLLQGVADQFGLDAPPQRIEVYDNSHVQGTNAVGAMIVAGPNGFEKAQYRKFNIRNADLTPGDDYGMLREVLQRRFQRLLREDPGQDLGHWPDLLLIDGGAGQLSSAVQVLADLEITNVPLVAISKGPDRNAGQEQFHIPGKPVRSLEPRDPVLFFLQRLRDEAHRFAIGAHRDKRARAATASPLDEMAGIGPRRKRALLNHFGSARAVAQAGLNDLEAVPGISAAMAKQIYTYF 1866
            D   TGP+ IR YLR+LP+ PGVYRMLG  GDVLYVGKARSLKKRV+SYAKL GH  RI RMI  TA MEF++T TETEALLLEANLIKRLKP YNVLLRDDKSFP+IL+TAHD+P + KHRGAR  +G+Y+GPFA+AGAV RTLN +QKAFLLRSC D VFENRTRPCLL QIKRCSAPCTG+I    Y  LV  A++FL+G  ++ +  L  EM+ A+ AL+FERAA+ RDRIRA++ VQAHQGINPQ   EADV ++H++ GQ C+QVFFFR+ QNWGNRAYFPR     ++ EIL  FL QFY  + PPR++LLSH      L++EAL T  G ++ +AVPRRGEK +LV HA  NA+EAL R+L E+ASQ KLL  +A+   L+APPQRIEVYDNSH+QG+NAVGAMIVAGP GFEK QYRKFNI++  LTPGDD+GM+REVL+RRF RLL+EDP ++   WPDL+LIDGGAGQ+S+  + L ++ +T VP + ++KG DR+AG+E+FH PGKP  +L  R P L+F+QRLRDEAHRFAIGAHR KRA+A  A+PLDE+ GIGP RKRALL HFGSA+AV++AGL+DL+AV GISAAMA+ I+ YF
Sbjct:   17 DRAPTGPERIRGYLRRLPDAPGVYRMLGPEGDVLYVGKARSLKKRVASYAKLVGHTNRIARMIAMTAEMEFVTTATETEALLLEANLIKRLKPRYNVLLRDDKSFPHILVTAHDYPEIKKHRGARKEKGQYYGPFASAGAVNRTLNQLQKAFLLRSCTDSVFENRTRPCLLFQIKRCSAPCTGEIGREDYAGLVADAQEFLSGRTSKVQADLAAEMQAASAALEFERAAALRDRIRALTQVQAHQGINPQRTAEADVVALHREGGQACVQVFFFRSHQNWGNRAYFPRVSTEDSDGEILEAFLGQFYSERVPPRMVLLSHEIAGGDLLSEALATIAGRRVVVAVPRRGEKRELVAHAATNAREALGRRLAESASQAKLLDALAESLKLEAPPQRIEVYDNSHIQGSNAVGAMIVAGPEGFEKGQYRKFNIKDTALTPGDDFGMMREVLRRRFSRLLKEDPDRETTAWPDLVLIDGGAGQISAVAETLEEIGVTGVPFIGVAKGEDRDAGKEEFHRPGKPPFALPHRSPALYFIQRLRDEAHRFAIGAHRAKRAKAVGATPLDEIPGIGPARKRALLAHFGSAKAVSRAGLSDLKAVDGISAAMAESIHAYF 627          
BLAST of mRNA_P-wetherbeei_contig5276.2.1 vs. uniprot
Match: F2J0H5_POLGS (UvrABC system protein C n=2 Tax=Polymorphum TaxID=991903 RepID=F2J0H5_POLGS)

HSP 1 Score: 804 bits (2077), Expect = 3.510e-286
Identity = 413/637 (64.84%), Postives = 496/637 (77.86%), Query Frame = 1
Query:   13 TTPPGHSDATRTGPDVIRAYLRQLPNRPGVYRMLGARGDVLYVGKARSLKKRVSSYAKLTGHGVRIGRMIQATATMEFISTQTETEALLLEANLIKRLKPYYNVLLRDDKSFPYILLTA-HDFPRLDKHRGARSREGEYFGPFANAGAVTRTLNTMQKAFLLRSCADGVFENRTRPCLLHQIKRCSAPCTGQIDAPAYKMLVEQARDFLTGGGAEARIRLTTEMEEAAEALDFERAASFRDRIRAMSAVQAHQGINPQGLLEADVFSVHQDSGQTCIQVFFFRAGQNWGNRAYFPRADKSLNEAEILGPFLAQFYDNKPPPRLLLLSHPAEDMALIAEALGTRTGHKIEIAVPRRGEKFDLVQHALRNAQEALERKLTETASQTKLLQGVADQFGLDAPPQRIEVYDNSHVQGTNAVGAMIVAGPNGFEKAQYRKFNIRNADLTPGDDYGMLREVLQRRFQRLLRED--PG--------------QDLGHWPDLLLIDGGAGQLSSAVQVLADLEITNVPLVAISKGPDRNAGQEQFHIPGKPVRSLEPRDPVLFFLQRLRDEAHRFAIGAHRDKRARAATASPLDEMAGIGPRRKRALLNHFGSARAVAQAGLNDLEAVPGISAAMAKQIYTYFHD 1872
            T P     A R G +VI   +++LP  PGVYRML   GDVLYVGKARSLKKRV+SY +L G   RI RMI ATA MEF+ T+TETEALLLEANLIKRL+P +NVLLRDDKSFPYILLTA H  P + KHRGAR R+G+YFGPFA+AGAV RT+N +QKAFL+R+C+D  FENR+RPCLL+QIKRC+ PCTG+     Y  LV +AR FL+G     +  L  +ME AAE LDFE+AA +RDR+ A+S VQAHQGINPQG+ EADVF+VHQD GQTC+QVFFFR GQNWGNRAYFP+ADKSL+EA +L  FLAQFYD+KP PRL+LLSH  E+  L+A AL  R+  K+E++VPRRGEK  LV HAL NA+EAL R+L ET+SQ +LL+GVA  FGL APP+RIEVYDNSH+ GTNAVGAMIVAGP GF K QYRKFNIR+ +LTPGDDYGM+REVL RRF RLL+E   PG               D+  WPDL+LIDGG GQL++   +LADL +T+VPL  I+KGPDR+AG+E+F + G+P   L  RDPVL+F+QRLRDEAHRFAIG+HR +R +    +PLDE+AGIGP RKRALL HFG+A+AV++AG+ DL AV GIS A+AKQIY +FHD
Sbjct:   28 TVPETAGPAGRAGVEVIADLVKRLPMGPGVYRMLDENGDVLYVGKARSLKKRVTSYTRLQGQSNRILRMIMATAAMEFVLTRTETEALLLEANLIKRLRPRFNVLLRDDKSFPYILLTADHAAPAIVKHRGARKRKGDYFGPFASAGAVNRTINALQKAFLIRNCSDSYFENRSRPCLLYQIKRCAGPCTGETGPEDYAGLVAEARAFLSGRSQLVKKDLAAQMEAAAEQLDFEQAAVYRDRLAALSHVQAHQGINPQGVEEADVFAVHQDGGQTCVQVFFFRTGQNWGNRAYFPKADKSLDEAAVLESFLAQFYDDKPAPRLILLSHAIEEQDLLARALSERSNRKVEVSVPRRGEKKALVDHALTNAREALGRRLAETSSQARLLEGVAKVFGLAAPPRRIEVYDNSHIMGTNAVGAMIVAGPEGFAKGQYRKFNIRSQELTPGDDYGMMREVLTRRFSRLLKEHQRPGAEVADEALAGAAGASDVPAWPDLVLIDGGQGQLNAVRDILADLGVTDVPLAGIAKGPDRDAGREKFFMEGRPSFMLPERDPVLYFVQRLRDEAHRFAIGSHRARRKKDIARNPLDEIAGIGPTRKRALLRHFGTAKAVSKAGIEDLVAVAGISEAVAKQIYDHFHD 664          
BLAST of mRNA_P-wetherbeei_contig5276.2.1 vs. uniprot
Match: UVRC_CHESB (UvrABC system protein C n=2 Tax=unclassified Chelativorans TaxID=2643807 RepID=UVRC_CHESB)

HSP 1 Score: 800 bits (2067), Expect = 7.800e-285
Identity = 396/628 (63.06%), Postives = 503/628 (80.10%), Query Frame = 1
Query:   31 SDATRTGPDVIRAYLRQLPNRPGVYRMLGARGDVLYVGKARSLKKRVSSYAKLTGHGVRIGRMIQATATMEFISTQTETEALLLEANLIKRLKPYYNVLLRDDKSFPYILLTA-HDFPRLDKHRGARSREGEYFGPFANAGAVTRTLNTMQKAFLLRSCADGVFENRTRPCLLHQIKRCSAPCTGQIDAPAYKMLVEQARDFLTGGGAEARIRLTTEMEEAAEALDFERAASFRDRIRAMSAVQAHQGINPQGLLEADVFSVHQDSGQTCIQVFFFRAGQNWGNRAYFPRADKSLNEAEILGPFLAQFYDNKPPPRLLLLSHPAEDMALIAEALGTRTGHKIEIAVPRRGEKFDLVQHALRNAQEALERKLTETASQTKLLQGVADQFGLDAPPQRIEVYDNSHVQGTNAVGAMIVAGPNGFEKAQYRKFNIRNADLTPGDDYGMLREVLQRRFQRLLRE-----------DPGQDLGHWPDLLLIDGGAGQLSSAVQVLADLEITN-VPLVAISKGPDRNAGQEQFHIPGKPVRSLEPRDPVLFFLQRLRDEAHRFAIGAHRDKRARAATASPLDEMAGIGPRRKRALLNHFGSARAVAQAGLNDLEAVPGISAAMAKQIYTYFHDA 1875
            ++   TG +VI+A +++LPN PGVYRM+   GDVLYVGKARSLKKRV++YA+  GH  RI RMI+ TATMEF+ T+TETEALLLEANLIKRL+P +NVL+RDDKSFPYILLT  H  P + KHRGARSR G+YFGPFA+AGAV RT+N++Q+AFLLR+C D VFE+RTRPCLL+QIKRCS PCT +I    Y  LV++A+DFL+G  +  +  + T M+EA++ALDFERAA +RDR+ A+S VQ+HQGINPQGL EADVF++HQ+ GQTCIQVFFFR GQNWGNRAYFP+AD +L   E+LG FLAQFYD+KP PRL+LLSHP ED  L+AEAL  R G K++++VP RGEK DL  HAL+NA+EAL R+L ET+SQ +LL+G+A+ FGL+A P+RIEVYDNSH+ GTNAVGAMIVAGP GF K QYRKFNIR+A++TPGDD+GM+REV+QRRF RL++E           D       WPDL+LIDGG GQ+S+  Q+L DL I + V  + ++KG DR+AG+E+F + G+P  +L PRDPVL+F+QRLRDEAHRFAIG+HR +R +    +PLDE+AGIGP RKRALL+HFG+A+AV++A + DL  V GIS ++A+ IY +FH++
Sbjct:   25 TETAATGVEVIQAVVKRLPNAPGVYRMVNTEGDVLYVGKARSLKKRVTNYAQGRGHSNRIERMIRETATMEFVVTRTETEALLLEANLIKRLRPRFNVLMRDDKSFPYILLTGNHPAPGIFKHRGARSRRGDYFGPFASAGAVGRTINSLQRAFLLRTCTDSVFESRTRPCLLYQIKRCSGPCTREISVEDYATLVKEAKDFLSGRSSTVKAEIATAMQEASQALDFERAAIYRDRLAALSHVQSHQGINPQGLEEADVFAIHQEGGQTCIQVFFFRTGQNWGNRAYFPKADPALGHGEVLGSFLAQFYDDKPCPRLILLSHPVEDQDLLAEALSARAGRKVQVSVPARGEKKDLTDHALQNAREALGRRLAETSSQARLLEGLAETFGLEAAPRRIEVYDNSHIMGTNAVGAMIVAGPEGFVKNQYRKFNIRSAEITPGDDFGMMREVMQRRFARLIKEQGLPGNGSEAEDSDASFPAWPDLILIDGGQGQMSAVRQILDDLGIADLVTAIGVAKGVDRDAGRERFFMEGRPPFTLPPRDPVLYFVQRLRDEAHRFAIGSHRARRKKEMVKNPLDEIAGIGPGRKRALLHHFGTAKAVSRAAVEDLMEVGGISESIARLIYNHFHES 652          
BLAST of mRNA_P-wetherbeei_contig5276.2.1 vs. uniprot
Match: UPI000362B2A4 (excinuclease ABC subunit UvrC n=1 Tax=Amorphus coralli TaxID=340680 RepID=UPI000362B2A4)

HSP 1 Score: 801 bits (2068), Expect = 8.460e-285
Identity = 402/629 (63.91%), Postives = 501/629 (79.65%), Query Frame = 1
Query:   16 TPPGHSDATRTGPDVIRAYLRQLPNRPGVYRMLGARGDVLYVGKARSLKKRVSSYAKLTGHGVRIGRMIQATATMEFISTQTETEALLLEANLIKRLKPYYNVLLRDDKSFPYILLTA-HDFPRLDKHRGARSREGEYFGPFANAGAVTRTLNTMQKAFLLRSCADGVFENRTRPCLLHQIKRCSAPCTGQIDAPAYKMLVEQARDFLTGGGAEARIRLTTEMEEAAEALDFERAASFRDRIRAMSAVQAHQGINPQGLLEADVFSVHQDSGQTCIQVFFFRAGQNWGNRAYFPRADKSLNEAEILGPFLAQFYDNKPPPRLLLLSHPAEDMALIAEALGTRTGHKIEIAVPRRGEKFDLVQHALRNAQEALERKLTETASQTKLLQGVADQFGLDAPPQRIEVYDNSHVQGTNAVGAMIVAGPNGFEKAQYRKFNIRNADLTPGDDYGMLREVLQRRFQRLLRED--------PGQDLGHWPDLLLIDGGAGQLSSAVQVLADLEITNVPLVAISKGPDRNAGQEQFHIPGKPVRSLEPRDPVLFFLQRLRDEAHRFAIGAHRDKRARAATASPLDEMAGIGPRRKRALLNHFGSARAVAQAGLNDLEAVPGISAAMAKQIYTYFHDA 1875
            TP G  +  RTG D+I   +++LPN PGVYRML  +GDVLYVGKARSLKKRV++YA+ TG   R   MI AT  MEF++T+TETEALLLEANLIKRL+P +NVLLRDDKSFPYIL+T  H+ P++ KHRGARS++G YFGPFA+AGAV RT+N +QKAFLLRSC D V+E+RTRPCLL QIKRC+ PCTG+ID   Y+ LV++A  FL G     +  L TEME A+E LDFE+AA +RDR+ A+S +Q+HQGINPQG+ EADVF+VHQ+ GQTCIQVFFFR GQNWGNRAYFP+AD   + AE+L  FLAQFYD+KP PRL+LLS    +  L+A+AL  R   K+ +A P+RG K +LV HAL+NA+EAL RKL E+ASQT LL+GVAD FGL+APP+RIEVYDNSH+ GTNAVG MIVAGP+GF KA YRKFNI++ D+TPGDD GM+REVL+RRF+RLLRE         P + +G WPDL+LIDGGA QL++A +V+ADL I  +P+V ++KG DR+AG+E+FHIPG+    L PRDPVL+F+QRLRDEAHRFAIG HR KR++   A+PLDE+ GIG  RKRALL HFG+A+AV++AG+ DL +V GIS AMA+ IY++FH++
Sbjct:   37 TPDG--ETARTGADLIGDLVKRLPNAPGVYRMLDKKGDVLYVGKARSLKKRVANYARPTGLHYRTLTMISATVAMEFVTTRTETEALLLEANLIKRLRPRFNVLLRDDKSFPYILITGDHEAPQIVKHRGARSKKGAYFGPFASAGAVNRTINALQKAFLLRSCTDSVYESRTRPCLLFQIKRCAGPCTGEIDIDGYRHLVDEAHTFLAGKSKAVKAELATEMERASERLDFEQAARYRDRLAALSHIQSHQGINPQGIEEADVFAVHQEGGQTCIQVFFFRTGQNWGNRAYFPKADAHWSLAEVLESFLAQFYDDKPCPRLILLSEQLPEQELLAQALAERAERKVTVAAPQRGTKRELVDHALQNAREALGRKLAESASQTTLLKGVADAFGLEAPPRRIEVYDNSHIMGTNAVGGMIVAGPDGFAKAHYRKFNIKSEDVTPGDDLGMMREVLERRFKRLLREAGPRGEREAPQEGVGPWPDLVLIDGGATQLAAAREVVADLGIEGLPMVGVAKGVDRDAGREEFHIPGRKPFRLPPRDPVLYFVQRLRDEAHRFAIGTHRAKRSKEIAANPLDEIQGIGAARKRALLRHFGTAKAVSKAGIEDLLSVDGISEAMARSIYSHFHES 663          
BLAST of mRNA_P-wetherbeei_contig5276.2.1 vs. uniprot
Match: UPI0018CFF715 (excinuclease ABC subunit UvrC n=1 Tax=Methylobrevis albus TaxID=2793297 RepID=UPI0018CFF715)

HSP 1 Score: 798 bits (2060), Expect = 2.460e-283
Identity = 406/642 (63.24%), Postives = 494/642 (76.95%), Query Frame = 1
Query:   13 TTPPGHSDATRTGPDVIRAYLRQLPNRPGVYRMLGARGDVLYVGKARSLKKRVSSYAKLTGHGVRIGRMIQATATMEFISTQTETEALLLEANLIKRLKPYYNVLLRDDKSFPYILLTA-HDFPRLDKHRGARSREGEYFGPFANAGAVTRTLNTMQKAFLLRSCADGVFENRTRPCLLHQIKRCSAPCTGQIDAPAYKMLVEQARDFLTGGGAEARIRLTTEMEEAAEALDFERAASFRDRIRAMSAVQAHQGINPQGLLEADVFSVHQDSGQTCIQVFFFRAGQNWGNRAYFPRADKSLNEAEILGPFLAQFYDNKPPPRLLLLSHPAEDMALIAEALGTRTGHKIEIAVPRRGEKFDLVQHALRNAQEALERKLTETASQTKLLQGVADQFGLDAPPQRIEVYDNSHVQGTNAVGAMIVAGPNGFEKAQYRKFNIRNADLTPGDDYGMLREVLQRRFQRLLRED---------------------PGQDLGHWPDLLLIDGGAGQLSSAVQVLADLEITNVPLVAISKGPDRNAGQEQFHIPGKPVRSLEPRDPVLFFLQRLRDEAHRFAIGAHRDKRARAATASPLDEMAGIGPRRKRALLNHFGSARAVAQAGLNDLEAVPGISAAMAKQIYTYFHD 1872
            T  P   +A R G  VI   ++ LPN PGVYRML   GDVLYVGKARSLKKRVSSYA++ G   RI RMIQATA MEF++T TETEALLLEANLIK+L+P +NVLLRDDKSFPYIL+T  H+ P+L KHRGARSR+G YFGPFA+AGAVTRT+N MQKAFL+R+C D V+E RTRPCLLHQIKRCSAPCT +I  P Y  LV +A  FL+G     R  L  EM+ A+EA++FERAA +RDR+ A+S VQ+HQGINPQ + EADVF+ HQD GQT IQVFFFR GQNWGNRAYFPRADKS+   E+L  F+ QFYD+KP PRL+L+SH  ++M L+A AL  R GH+IEIAVPRRGEK DLV HAL+NA+EAL RKL ET+SQ+ LL GVA  FGL+APP+RIEVYDNSH+ G+NAVG MIVAGP GF K QYRKFNIR AD+TPGDD+GM+REVL RRF RL++E                      P   +G WPDL+LIDGGAGQLS+A  +  +L I +V LV ++KGPDR+AG+E+F + GKP   L  RDPVL+++QRLRDEAHRFAIG+HR +R++    + L+E+AG+GP RKRALLNHFG+ +A+ +AG+ DL +VPGIS A A+ +Y +FH+
Sbjct:   37 TETPAAREALRFGTAVIADMVKLLPNGPGVYRMLSGSGDVLYVGKARSLKKRVSSYARIAGQSNRIIRMIQATAAMEFVTTATETEALLLEANLIKQLRPRFNVLLRDDKSFPYILITGDHEAPQLVKHRGARSRKGRYFGPFASAGAVTRTINAMQKAFLIRTCTDSVYETRTRPCLLHQIKRCSAPCTREIAIPDYAELVSEATAFLSGKSRAIRSELAAEMQTASEAMEFERAAVYRDRLAALSHVQSHQGINPQNVEEADVFACHQDGGQTSIQVFFFRTGQNWGNRAYFPRADKSMEVGEVLSSFIGQFYDDKPAPRLVLVSHEPDEMDLLAAALSERAGHRIEIAVPRRGEKKDLVDHALQNAREALGRKLAETSSQSTLLGGVARAFGLEAPPRRIEVYDNSHISGSNAVGGMIVAGPEGFVKNQYRKFNIRGADITPGDDFGMMREVLTRRFSRLIKEHGPRGEAVAPEAGTVAGEEGPLPTDPVGPWPDLVLIDGGAGQLSAAQAIFDELGIDDVALVGVAKGPDRDAGREKFFVTGKPDFMLPLRDPVLYYVQRLRDEAHRFAIGSHRARRSKDIGRAGLEEIAGVGPTRKRALLNHFGTLKAIQRAGIEDLLSVPGISEATARTVYEFFHE 678          
BLAST of mRNA_P-wetherbeei_contig5276.2.1 vs. uniprot
Match: UPI0012ED0B0A (excinuclease ABC subunit UvrC n=1 Tax=Mesorhizobium xinjiangense TaxID=2678685 RepID=UPI0012ED0B0A)

HSP 1 Score: 796 bits (2057), Expect = 4.740e-283
Identity = 397/622 (63.83%), Postives = 495/622 (79.58%), Query Frame = 1
Query:   43 RTGPDVIRAYLRQLPNRPGVYRMLGARGDVLYVGKARSLKKRVSSYAKLTGHGVRIGRMIQATATMEFISTQTETEALLLEANLIKRLKPYYNVLLRDDKSFPYILLTA-HDFPRLDKHRGARSREGEYFGPFANAGAVTRTLNTMQKAFLLRSCADGVFENRTRPCLLHQIKRCSAPCTGQIDAPAYKMLVEQARDFLTGGGAEARIRLTTEMEEAAEALDFERAASFRDRIRAMSAVQAHQGINPQGLLEADVFSVHQDSGQTCIQVFFFRAGQNWGNRAYFPRADKSLNEAEILGPFLAQFYDNKPPPRLLLLSHPAEDMALIAEALGTRTGHKIEIAVPRRGEKFDLVQHALRNAQEALERKLTETASQTKLLQGVADQFGLDAPPQRIEVYDNSHVQGTNAVGAMIVAGPNGFEKAQYRKFNIRNADLTPGDDYGMLREVLQRRFQRLLREDPGQD----------LGHWPDLLLIDGGAGQLSSAVQVLADLEITN-VPLVAISKGPDRNAGQEQFHIPGKPVRSLEPRDPVLFFLQRLRDEAHRFAIGAHRDKRARAATASPLDEMAGIGPRRKRALLNHFGSARAVAQAGLNDLEAVPGISAAMAKQIYTYFHD 1872
            +TGPDVI  +++ LPN PGVYRM+ A GDVLYVGKARSLKKRV++YA+  GH  RI RMI+ TATMEF+ T TE EALLLEANLIKRL+P +NVLLRDDKSFPYILLT  H  P + KHRGARSR+G+YFGPFA+AGAV RT+N +Q+AFLLR+C D VF++RTRPCLL+QIKRCS PCTG+I   AY  LV +ARDFL+G   + +  +++ M++AAE LDFERAA  RDR+ A+S VQ+HQG+NP+ + EADVF++HQD GQ CI+VFFFR GQNWGNRAYFP+AD +L  A++LG FLAQFYD+KP PRL+LLSH  E+  L+ EAL TR G ++ I+VPRRGEK DLV HA++NA+EAL R+L ET+SQ +LL+G+A+ FGL+ PP+RIEVYDNSH+ GTNAVGAMIVAGP GF K QYRKFNIR+AD+TPGDD+ M+REV++RRF RLL+E    D             WPDL+LIDGG GQ+S+   VL  L  +  V  V ++KG DR AG+E+F + G+P  +L PRDPVL+F+QRLRDEAHRFAIG+HR +R +  T +PLDE+ GIGP RKRALL+HFG+A+AV++AG+ DL AV GIS AMA+ IY +FHD
Sbjct:   47 KTGPDVIATFVKHLPNAPGVYRMMNAAGDVLYVGKARSLKKRVANYAQGRGHTNRIARMIRETATMEFVVTHTEIEALLLEANLIKRLRPRFNVLLRDDKSFPYILLTGDHKAPGIFKHRGARSRKGDYFGPFASAGAVGRTINALQRAFLLRTCTDSVFDSRTRPCLLYQIKRCSGPCTGEIGEAAYGELVSEARDFLSGKSRKVKSEISSAMQDAAETLDFERAAMLRDRLAALSHVQSHQGVNPRSVEEADVFAIHQDGGQVCIEVFFFRTGQNWGNRAYFPKADPALEPAQVLGAFLAQFYDDKPCPRLILLSHAVEEQDLLTEALATRAGRRVTISVPRRGEKKDLVDHAVQNAREALGRRLAETSSQARLLEGLAETFGLERPPRRIEVYDNSHIMGTNAVGAMIVAGPEGFVKGQYRKFNIRSADITPGDDFAMMREVMERRFGRLLKEHGPPDGNGDEAEEERFPAWPDLILIDGGQGQMSAVRPVLDTLGASQWVTAVGVAKGMDREAGRERFFMEGRPPFTLPPRDPVLYFVQRLRDEAHRFAIGSHRARRKKEMTTNPLDEIDGIGPARKRALLHHFGTAKAVSRAGVEDLVAVEGISEAMARHIYEHFHD 668          
BLAST of mRNA_P-wetherbeei_contig5276.2.1 vs. uniprot
Match: A0A5D4GVU2_9HYPH (UvrABC system protein C n=1 Tax=Mesorhizobium microcysteis TaxID=2682781 RepID=A0A5D4GVU2_9HYPH)

HSP 1 Score: 796 bits (2057), Expect = 9.350e-283
Identity = 398/626 (63.58%), Postives = 501/626 (80.03%), Query Frame = 1
Query:   43 RTGPDVIRAYLRQLPNRPGVYRMLGARGDVLYVGKARSLKKRVSSYAKLTGHGVRIGRMIQATATMEFISTQTETEALLLEANLIKRLKPYYNVLLRDDKSFPYILLTAHDFPRLDKHRGARSREGEYFGPFANAGAVTRTLNTMQKAFLLRSCADGVFENRTRPCLLHQIKRCSAPCTGQIDAPAYKMLVEQARDFLTGGGAEARIRLTTEMEEAAEALDFERAASFRDRIRAMSAVQAHQGINPQGLLEADVFSVHQDSGQTCIQVFFFRAGQNWGNRAYFPRADKSLNEAEILGPFLAQFYDNKPPPRLLLLSHPAEDMALIAEALGTRTGHKIEIAVPRRGEKFDLVQHALRNAQEALERKLTETASQTKLLQGVADQFGLDAPPQRIEVYDNSHVQGTNAVGAMIVAGPNGFEKAQYRKFNIRNADLTPGDDYGMLREVLQRRFQRLLRE--------------DPGQD-LGHWPDLLLIDGGAGQLSSAVQVLADLEITN-VPLVAISKGPDRNAGQEQFHIPGKPVRSLEPRDPVLFFLQRLRDEAHRFAIGAHRDKRARAATASPLDEMAGIGPRRKRALLNHFGSARAVAQAGLNDLEAVPGISAAMAKQIYTYFHD 1872
            + G +VI+  +++LPN PGVYRM+ A GDVLYVGKARSLKKRV++YA+  GH  RIGRM++ TA+MEF+ T+TE EALLLEANLIKRL+P +NVLLRDDKSFPYIL+T H  P + KHRGARSR G+YFGPFA+AGAV RT+N +Q+AFLLRSC D VFENRTRPCLL QIKRCSAPCT +ID   Y  LV +A+ FL+G  ++ +  +++ M+EA+EALDFERAA +RDR+ A+S VQ+HQGINPQ + EADVF++HQ+ GQ+CI+VFFFR GQNWGNRAYFP+AD SL  AE+LG FLAQFYD+KP PR +LLSH  E+ AL+AEAL TR GHK+ ++VP+RGEK DL  HAL+NA+EAL R+L ET+SQ +LL G+AD FGL+  P+RIEVYDNSH+ GTNAVGAMIVAGP GF K QYRKFNIR+ D+TPGDD+GM+REV++RRF RLL+E              D G D L  WPDL+LIDGG GQ+S+  ++L DL IT+ V  + ++KG DR+AG+E+F + G+   SL  RDPVL+F+QRLRDEAHRFAIG+HR +R +    +PLDE+AGIGP RKRALL+HFG+A+AV++AG+ DL AV GIS  +A+ IY +FH+
Sbjct:   62 KAGIEVIQGLVKRLPNAPGVYRMMNAAGDVLYVGKARSLKKRVTNYAQGRGHTNRIGRMVRETASMEFVVTRTEIEALLLEANLIKRLRPRFNVLLRDDKSFPYILITDHPSPGIFKHRGARSRGGDYFGPFASAGAVDRTINALQRAFLLRSCTDSVFENRTRPCLLFQIKRCSAPCTREIDEEGYAELVREAKAFLSGRSSKVKAEISSAMQEASEALDFERAAIYRDRLTALSHVQSHQGINPQSVDEADVFAIHQEGGQSCIEVFFFRTGQNWGNRAYFPKADPSLEPAEVLGAFLAQFYDDKPCPRTVLLSHQVEEQALLAEALATRAGHKVTVSVPQRGEKKDLTDHALQNAREALGRRLAETSSQARLLAGLADTFGLEKTPRRIEVYDNSHIMGTNAVGAMIVAGPEGFAKNQYRKFNIRSTDITPGDDFGMMREVMERRFSRLLKEHGEVEPEVDTQTDDDIGNDALPAWPDLILIDGGQGQMSAVRKILGDLGITDRVAAIGVAKGVDRDAGRERFFVSGREPFSLPVRDPVLYFVQRLRDEAHRFAIGSHRARRKKEMVRNPLDEIAGIGPGRKRALLHHFGTAKAVSRAGVEDLMAVDGISERVARLIYGHFHE 687          
BLAST of mRNA_P-wetherbeei_contig5276.2.1 vs. uniprot
Match: UPI001AD8E68B (excinuclease ABC subunit UvrC n=1 Tax=Roseibium sediminis TaxID=1775174 RepID=UPI001AD8E68B)

HSP 1 Score: 794 bits (2050), Expect = 3.690e-282
Identity = 399/633 (63.03%), Postives = 493/633 (77.88%), Query Frame = 1
Query:   34 DATRTGPDVIRAYLRQLPNRPGVYRMLGARGDVLYVGKARSLKKRVSSYAKLTGHGVRIGRMIQATATMEFISTQTETEALLLEANLIKRLKPYYNVLLRDDKSFPYILLTA-HDFPRLDKHRGARSREGEYFGPFANAGAVTRTLNTMQKAFLLRSCADGVFENRTRPCLLHQIKRCSAPCTGQIDAPAYKMLVEQARDFLTGGGAEARIRLTTEMEEAAEALDFERAASFRDRIRAMSAVQAHQGINPQGLLEADVFSVHQDSGQTCIQVFFFRAGQNWGNRAYFPRADKSLNEAEILGPFLAQFYDNKPPPRLLLLSHPAEDMALIAEALGTRTGHKIEIAVPRRGEKFDLVQHALRNAQEALERKLTETASQTKLLQGVADQFGLDAPPQRIEVYDNSHVQGTNAVGAMIVAGPNGFEKAQYRKFNIRNADLTPGDDYGMLREVLQRRFQRLLREDPGQD------------------LGHWPDLLLIDGGAGQLSSAVQVLADLEITNVPLVAISKGPDRNAGQEQFHIPGKPVRSLEPRDPVLFFLQRLRDEAHRFAIGAHRDKRARAATASPLDEMAGIGPRRKRALLNHFGSARAVAQAGLNDLEAVPGISAAMAKQIYTYFHDA 1875
            +  R G DVI   +++LPN PGVYRM   +GDVLYVGKAR+LKKRV+SY +L G   RI RMI +TA MEF+ TQTE EALLLEANLIKRL+P +NVLLRDDKSFPYIL+T  H+   + KHRGAR R+G+YFGPFA+AGAV RT+N +QKAFL+R+C+D  +ENR+RPCL +QIKRC+ PCTGQI    Y  LV++A+ FL+G     +  L ++ME A+E LDFERAA  RDR+ A+S VQAHQGINPQ + EADVF++HQ+ GQ+C+QVFFFR GQNWGNRAYFP+ADKS  E +IL  FLAQFYD+KP PRL+LLSHPAE+  L+A+AL  R G K+EI+VP+RGEK DLV HA+RNA+EAL R+L ET+SQ +LL GVA+ F L APP+RIEVYDNSH+ GTNAVG MIVAGP G  KA YRKFNI++ DLTPGDDYGM+REVL RRF RL++E    D                  +  WPDL+LIDGG GQL++A + L  L +T+VPLV I+KGPDR+AG+E+F I G+P   L  RDPVL+F+QRLRDEAHRFAIG+HR +R +  T +PLDE+AGIGP RKRALL HFG+A+AV++AGL DL AVPGIS A+AK +Y +FH++
Sbjct:   27 EPVRKGVDVIIDQVKRLPNSPGVYRMFDEKGDVLYVGKARNLKKRVTSYTRLQGQSNRIMRMIMSTAAMEFVVTQTEPEALLLEANLIKRLRPRFNVLLRDDKSFPYILITGDHESAAIVKHRGARKRKGDYFGPFASAGAVDRTINALQKAFLIRNCSDSYYENRSRPCLQYQIKRCAGPCTGQISTEGYAELVDEAKAFLSGRSPAVKKELASQMEAASEVLDFERAAICRDRLAALSHVQAHQGINPQTVEEADVFAIHQEGGQSCVQVFFFRTGQNWGNRAYFPKADKSFEEPDILESFLAQFYDDKPAPRLILLSHPAEEQDLLAQALSERMGRKVEISVPKRGEKKDLVDHAIRNAKEALGRRLAETSSQARLLAGVAEAFDLPAPPRRIEVYDNSHIMGTNAVGGMIVAGPEGLAKAHYRKFNIKSEDLTPGDDYGMMREVLTRRFARLMKEHARTDEDASVTDDADTTETTQTDVPAWPDLVLIDGGQGQLTAARETLEGLGLTDVPLVGIAKGPDRDAGREKFFIAGRPSFMLPERDPVLYFVQRLRDEAHRFAIGSHRARRKKDITKNPLDEIAGIGPTRKRALLRHFGTAKAVSKAGLEDLTAVPGISEAVAKIVYNHFHES 659          
BLAST of mRNA_P-wetherbeei_contig5276.2.1 vs. uniprot
Match: A0A7W9FJD3_9HYPH (UvrABC system protein C n=2 Tax=Prosthecomicrobium pneumaticum TaxID=81895 RepID=A0A7W9FJD3_9HYPH)

HSP 1 Score: 791 bits (2043), Expect = 3.090e-281
Identity = 406/619 (65.59%), Postives = 491/619 (79.32%), Query Frame = 1
Query:   49 GPDVIRAYLRQLPNRPGVYRMLGARGDVLYVGKARSLKKRVSSYAKLTGHGVRIGRMIQATATMEFISTQTETEALLLEANLIKRLKPYYNVLLRDDKSFPYILLTA-HDFPRLDKHRGARSREGEYFGPFANAGAVTRTLNTMQKAFLLRSCADGVFENRTRPCLLHQIKRCSAPCTGQIDAPAYKMLVEQARDFLTGGGAEARIRLTTEMEEAAEALDFERAASFRDRIRAMSAVQAHQGINPQGLLEADVFSVHQDSGQTCIQVFFFRAGQNWGNRAYFPRADKSLNEAEILGPFLAQFYDNKPPPRLLLLSHPAEDMALIAEALGTRTGHKIEIAVPRRGEKFDLVQHALRNAQEALERKLTETASQTKLLQGVADQFGLDAPPQRIEVYDNSHVQGTNAVGAMIVAGPNGFEKAQYRKFNIRNADLTPGDDYGMLREVLQRRFQRLLRE-----DPGQD---LGHWPDLLLIDGGAGQLSSAVQVLADLEITN-VPLVAISKGPDRNAGQEQFHIPGKPVRSLEPRDPVLFFLQRLRDEAHRFAIGAHRDKRARAATASPLDEMAGIGPRRKRALLNHFGSARAVAQAGLNDLEAVPGISAAMAKQIYTYFHDA 1875
            GP VI  ++++LPN PGVYRM  A  +VLYVGKAR+LKKRV++Y K+ G   RI RM+QATATMEF++T+TETEALLLEANLIKRL+P +NVLLRDDKSFPYIL+T  H+ P+L KHRGARSR+G+YFGPFA+AGAV RT+  MQ+AFL+R+C D V+E RTRPCLLHQIKRCSAPCTG+I    Y  LV +A+ FL+G     R +L  EME AA  LDFERAA +RDRI AMS VQ HQGINPQG+ EADVF+VHQ  GQTCIQVFFFR GQNWGN AYFPRADKSL+ AE+LG FL QFY++KP PRL+LLS   E+  LI EAL  R G+++EIAVP+RGEK DLV HAL NA++AL R L ET+SQ +LL G+A+ FGL+APP+RIEVYDNSH+ GTNAVGAMIVAGP GF K  YRKFNIR+ DL PGDD+GM+REVL RRF RL+RE     +  +D    G WPDL+LIDGG GQL++A +V+A L + + VPLV ++KGPDR+AG+E FH  G     L+PRDPVL+F+QRLRDEAHRFAIG+HR KR      +PLDE+AGIGP RKRALL HFG+A+AV++A L DL  VPG+S  MA+ IY +FH++
Sbjct:   31 GPAVIADFVKRLPNAPGVYRMFDAEENVLYVGKARNLKKRVANYVKV-GQSNRIARMVQATATMEFVTTRTETEALLLEANLIKRLRPRFNVLLRDDKSFPYILITGDHEAPQLVKHRGARSRKGDYFGPFASAGAVNRTVTAMQRAFLIRTCTDSVYETRTRPCLLHQIKRCSAPCTGEIALDDYAELVREAKGFLSGKSTAIRGQLAAEMEAAAAELDFERAAIYRDRIAAMSHVQGHQGINPQGVEEADVFAVHQAGGQTCIQVFFFRTGQNWGNHAYFPRADKSLSAAEVLGAFLVQFYEDKPCPRLVLLSETVEEEELIGEALSERAGYRVEIAVPKRGEKKDLVDHALTNARDALGRHLAETSSQIRLLDGLAEVFGLEAPPRRIEVYDNSHIMGTNAVGAMIVAGPQGFAKNHYRKFNIRSEDLVPGDDFGMMREVLTRRFSRLVREAGPRSEAPRDENGFGPWPDLVLIDGGKGQLAAAREVIAALGLEDDVPLVGVAKGPDRDAGREVFHRIGADPFMLQPRDPVLYFVQRLRDEAHRFAIGSHRAKRKADMARNPLDEIAGIGPTRKRALLAHFGTAKAVSRASLGDLAGVPGVSEQMARAIYDHFHES 648          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5276.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3B9BFX6_9PROT1.420e-30368.67Excinuclease ABC subunit C (Fragment) n=2 Tax=Alph... [more]
UPI0012E12A239.400e-29065.96excinuclease ABC subunit UvrC n=1 Tax=Oceanobacill... [more]
F2J0H5_POLGS3.510e-28664.84UvrABC system protein C n=2 Tax=Polymorphum TaxID=... [more]
UVRC_CHESB7.800e-28563.06UvrABC system protein C n=2 Tax=unclassified Chela... [more]
UPI000362B2A48.460e-28563.91excinuclease ABC subunit UvrC n=1 Tax=Amorphus cor... [more]
UPI0018CFF7152.460e-28363.24excinuclease ABC subunit UvrC n=1 Tax=Methylobrevi... [more]
UPI0012ED0B0A4.740e-28363.83excinuclease ABC subunit UvrC n=1 Tax=Mesorhizobiu... [more]
A0A5D4GVU2_9HYPH9.350e-28363.58UvrABC system protein C n=1 Tax=Mesorhizobium micr... [more]
UPI001AD8E68B3.690e-28263.03excinuclease ABC subunit UvrC n=1 Tax=Roseibium se... [more]
A0A7W9FJD3_9HYPH3.090e-28165.59UvrABC system protein C n=2 Tax=Prosthecomicrobium... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5276contigP-wetherbeei_contig5276:891..2768 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog935840.JAEQ01000002_gene3542
Preferred nameuvrC
PFAMsGIY-YIG,HHH_2,HHH_5,UVR,UvrC_HhH_N
Model size1878
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K03703
KEGG Pathwayko03420,map03420
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009380,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:0071496,GO:1902494,GO:1905347,GO:1905348,GO:1990391
Exons1
Evalue1.87e-287
EggNOG OGsCOG0322@1|root,COG0322@2|Bacteria,1MV38@1224|Proteobacteria,2TT32@28211|Alphaproteobacteria,43HQ1@69277|Phyllobacteriaceae
DescriptionThe UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
Cds size1878
COG categoryL
BRITEko00000,ko00001,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186790.6992118-CDS-P-wetherbeei_contig5276:890..27681683186790.6992118-CDS-P-wetherbeei_contig5276:890..2768Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5276 891..2768 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5276.2.1prot_P-wetherbeei_contig5276.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5276 891..2768 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5276.2.1

>prot_P-wetherbeei_contig5276.2.1 ID=prot_P-wetherbeei_contig5276.2.1|Name=mRNA_P-wetherbeei_contig5276.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=626bp
MLENTTPPGHSDATRTGPDVIRAYLRQLPNRPGVYRMLGARGDVLYVGKA
RSLKKRVSSYAKLTGHGVRIGRMIQATATMEFISTQTETEALLLEANLIK
RLKPYYNVLLRDDKSFPYILLTAHDFPRLDKHRGARSREGEYFGPFANAG
AVTRTLNTMQKAFLLRSCADGVFENRTRPCLLHQIKRCSAPCTGQIDAPA
YKMLVEQARDFLTGGGAEARIRLTTEMEEAAEALDFERAASFRDRIRAMS
AVQAHQGINPQGLLEADVFSVHQDSGQTCIQVFFFRAGQNWGNRAYFPRA
DKSLNEAEILGPFLAQFYDNKPPPRLLLLSHPAEDMALIAEALGTRTGHK
IEIAVPRRGEKFDLVQHALRNAQEALERKLTETASQTKLLQGVADQFGLD
APPQRIEVYDNSHVQGTNAVGAMIVAGPNGFEKAQYRKFNIRNADLTPGD
DYGMLREVLQRRFQRLLREDPGQDLGHWPDLLLIDGGAGQLSSAVQVLAD
LEITNVPLVAISKGPDRNAGQEQFHIPGKPVRSLEPRDPVLFFLQRLRDE
AHRFAIGAHRDKRARAATASPLDEMAGIGPRRKRALLNHFGSARAVAQAG
LNDLEAVPGISAAMAKQIYTYFHDA*
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mRNA from alignment at P-wetherbeei_contig5276:891..2768-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5276.2.1 ID=mRNA_P-wetherbeei_contig5276.2.1|Name=mRNA_P-wetherbeei_contig5276.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1878bp|location=Sequence derived from alignment at P-wetherbeei_contig5276:891..2768- (Phaeothamnion wetherbeei SAG_119_79)
ATGCTCGAAAACACCACGCCTCCCGGCCATTCTGACGCCACCAGAACGGG GCCGGATGTCATTCGCGCTTATCTCAGGCAATTGCCCAACAGGCCCGGCG TTTATCGCATGCTGGGCGCCAGGGGTGATGTGCTCTATGTCGGCAAGGCC CGCAGCCTGAAAAAGCGGGTTTCCAGCTATGCCAAGCTGACCGGCCATGG CGTCCGCATCGGCCGGATGATCCAGGCCACCGCAACTATGGAGTTTATCT CTACCCAGACCGAAACCGAGGCGCTGCTGCTGGAAGCCAATCTGATCAAG CGGCTGAAGCCTTATTACAATGTCCTGCTGCGCGATGATAAAAGCTTCCC CTATATCCTGCTGACGGCGCATGATTTTCCCCGGCTGGACAAGCACCGGG GGGCGCGTTCGCGCGAGGGCGAATATTTCGGCCCCTTCGCCAATGCCGGC GCGGTCACCCGCACCCTGAACACCATGCAAAAGGCGTTTTTGTTGCGGTC CTGCGCCGATGGCGTGTTTGAAAACCGCACCCGCCCCTGCCTGCTGCATC AGATAAAGCGATGCAGCGCGCCCTGCACCGGCCAGATTGATGCCCCCGCC TATAAAATGCTGGTGGAACAAGCCCGCGACTTTCTGACCGGCGGCGGGGC AGAGGCGCGCATCCGGCTGACCACGGAGATGGAAGAGGCCGCAGAGGCGC TGGATTTTGAACGCGCCGCCAGTTTCCGCGACCGTATCCGCGCCATGAGC GCGGTGCAGGCGCATCAGGGGATTAATCCGCAGGGCCTGCTGGAAGCCGA TGTTTTTTCGGTGCATCAGGACAGCGGCCAGACCTGCATTCAGGTTTTCT TTTTCCGTGCGGGACAGAATTGGGGCAACCGCGCCTATTTCCCGCGCGCC GATAAATCGCTGAACGAGGCGGAAATACTGGGCCCGTTTCTGGCGCAGTT TTACGACAATAAACCACCGCCGCGGCTGTTGCTGCTGTCGCATCCGGCAG AAGATATGGCATTGATTGCCGAGGCGCTGGGAACCCGCACCGGCCATAAA ATTGAAATTGCCGTCCCCCGGCGCGGTGAAAAATTTGATCTGGTGCAACA TGCGTTGCGTAACGCGCAGGAAGCGCTGGAACGCAAGCTGACGGAAACCG CATCGCAGACAAAATTGCTGCAAGGCGTGGCGGATCAATTTGGCCTGGAC GCGCCACCGCAACGCATAGAGGTGTATGATAACAGCCACGTGCAGGGAAC CAATGCCGTCGGCGCGATGATTGTCGCCGGGCCCAACGGGTTTGAAAAAG CCCAGTACCGGAAATTCAATATCCGCAACGCCGATCTGACCCCCGGCGAT GATTACGGCATGTTGCGCGAGGTGCTGCAACGGCGCTTTCAGCGTCTGCT GCGCGAAGACCCAGGCCAGGATCTGGGGCATTGGCCGGATCTGCTATTGA TCGATGGCGGCGCCGGACAGCTTTCCAGCGCCGTGCAGGTGCTTGCTGAT CTTGAAATCACAAATGTGCCCCTGGTCGCCATTTCCAAAGGCCCGGACCG TAATGCCGGACAGGAACAGTTTCACATACCGGGAAAACCCGTGCGCAGTC TGGAGCCGCGCGACCCGGTACTGTTTTTTCTGCAGCGCCTGCGCGACGAG GCGCACCGTTTTGCCATTGGTGCGCACCGCGATAAACGCGCCCGCGCCGC CACTGCGTCACCGCTGGATGAGATGGCGGGCATTGGCCCGCGCCGCAAAC GCGCGCTGCTCAATCATTTTGGTTCCGCCCGTGCTGTGGCCCAGGCCGGA CTGAACGATCTGGAGGCGGTTCCGGGCATCAGCGCCGCCATGGCAAAACA GATCTACACATATTTTCATGACGCCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5276:891..2768-

>mRNA_P-wetherbeei_contig5276.2.1 ID=mRNA_P-wetherbeei_contig5276.2.1|Name=mRNA_P-wetherbeei_contig5276.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1878bp|location=Sequence derived from alignment at P-wetherbeei_contig5276:891..2768- (Phaeothamnion wetherbeei SAG_119_79)
ATGCTCGAAAACACCACGCCTCCCGGCCATTCTGACGCCACCAGAACGGG
GCCGGATGTCATTCGCGCTTATCTCAGGCAATTGCCCAACAGGCCCGGCG
TTTATCGCATGCTGGGCGCCAGGGGTGATGTGCTCTATGTCGGCAAGGCC
CGCAGCCTGAAAAAGCGGGTTTCCAGCTATGCCAAGCTGACCGGCCATGG
CGTCCGCATCGGCCGGATGATCCAGGCCACCGCAACTATGGAGTTTATCT
CTACCCAGACCGAAACCGAGGCGCTGCTGCTGGAAGCCAATCTGATCAAG
CGGCTGAAGCCTTATTACAATGTCCTGCTGCGCGATGATAAAAGCTTCCC
CTATATCCTGCTGACGGCGCATGATTTTCCCCGGCTGGACAAGCACCGGG
GGGCGCGTTCGCGCGAGGGCGAATATTTCGGCCCCTTCGCCAATGCCGGC
GCGGTCACCCGCACCCTGAACACCATGCAAAAGGCGTTTTTGTTGCGGTC
CTGCGCCGATGGCGTGTTTGAAAACCGCACCCGCCCCTGCCTGCTGCATC
AGATAAAGCGATGCAGCGCGCCCTGCACCGGCCAGATTGATGCCCCCGCC
TATAAAATGCTGGTGGAACAAGCCCGCGACTTTCTGACCGGCGGCGGGGC
AGAGGCGCGCATCCGGCTGACCACGGAGATGGAAGAGGCCGCAGAGGCGC
TGGATTTTGAACGCGCCGCCAGTTTCCGCGACCGTATCCGCGCCATGAGC
GCGGTGCAGGCGCATCAGGGGATTAATCCGCAGGGCCTGCTGGAAGCCGA
TGTTTTTTCGGTGCATCAGGACAGCGGCCAGACCTGCATTCAGGTTTTCT
TTTTCCGTGCGGGACAGAATTGGGGCAACCGCGCCTATTTCCCGCGCGCC
GATAAATCGCTGAACGAGGCGGAAATACTGGGCCCGTTTCTGGCGCAGTT
TTACGACAATAAACCACCGCCGCGGCTGTTGCTGCTGTCGCATCCGGCAG
AAGATATGGCATTGATTGCCGAGGCGCTGGGAACCCGCACCGGCCATAAA
ATTGAAATTGCCGTCCCCCGGCGCGGTGAAAAATTTGATCTGGTGCAACA
TGCGTTGCGTAACGCGCAGGAAGCGCTGGAACGCAAGCTGACGGAAACCG
CATCGCAGACAAAATTGCTGCAAGGCGTGGCGGATCAATTTGGCCTGGAC
GCGCCACCGCAACGCATAGAGGTGTATGATAACAGCCACGTGCAGGGAAC
CAATGCCGTCGGCGCGATGATTGTCGCCGGGCCCAACGGGTTTGAAAAAG
CCCAGTACCGGAAATTCAATATCCGCAACGCCGATCTGACCCCCGGCGAT
GATTACGGCATGTTGCGCGAGGTGCTGCAACGGCGCTTTCAGCGTCTGCT
GCGCGAAGACCCAGGCCAGGATCTGGGGCATTGGCCGGATCTGCTATTGA
TCGATGGCGGCGCCGGACAGCTTTCCAGCGCCGTGCAGGTGCTTGCTGAT
CTTGAAATCACAAATGTGCCCCTGGTCGCCATTTCCAAAGGCCCGGACCG
TAATGCCGGACAGGAACAGTTTCACATACCGGGAAAACCCGTGCGCAGTC
TGGAGCCGCGCGACCCGGTACTGTTTTTTCTGCAGCGCCTGCGCGACGAG
GCGCACCGTTTTGCCATTGGTGCGCACCGCGATAAACGCGCCCGCGCCGC
CACTGCGTCACCGCTGGATGAGATGGCGGGCATTGGCCCGCGCCGCAAAC
GCGCGCTGCTCAATCATTTTGGTTCCGCCCGTGCTGTGGCCCAGGCCGGA
CTGAACGATCTGGAGGCGGTTCCGGGCATCAGCGCCGCCATGGCAAAACA
GATCTACACATATTTTCATGACGCCTGA
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