prot_P-wetherbeei_contig52737.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig52737.1.1
Unique Nameprot_P-wetherbeei_contig52737.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length134
Homology
BLAST of mRNA_P-wetherbeei_contig52737.1.1 vs. uniprot
Match: UPI001986CDD9 (MerR family DNA-binding transcriptional regulator n=1 Tax=Prolixibacteraceae bacterium TaxID=2053594 RepID=UPI001986CDD9)

HSP 1 Score: 211 bits (536), Expect = 3.620e-68
Identity = 112/128 (87.50%), Postives = 120/128 (93.75%), Query Frame = 0
Query:    1 MADTTFTITELAREFGLTTRAIRFYEDHGLIAPSRAGRNRVYGNRDKVRLKLTLRGKRLGLSLLEIRELIDMYDAARDERAQVERLQEVLRKRRSILEQQREDIEVVLGEIAAFEAQCGKFLDAGKKA 128
            MADTT+TITELAREFGLTTRAIRFYEDHGLIAP+RAGRNRVYG+RDKVRLKLTLRGKRLGLSL EIRELID+YDAA+DERAQVERLQ+VL KRR+ILEQQREDIE VLGEIAAFE QC +FLD   KA
Sbjct:    1 MADTTYTITELAREFGLTTRAIRFYEDHGLIAPTRAGRNRVYGSRDKVRLKLTLRGKRLGLSLSEIRELIDIYDAAKDERAQVERLQQVLHKRRTILEQQREDIEAVLGEIAAFEEQCRQFLDGKAKA 128          
BLAST of mRNA_P-wetherbeei_contig52737.1.1 vs. uniprot
Match: UPI00145995B1 (MerR family DNA-binding transcriptional regulator n=1 Tax=Azoarcus taiwanensis TaxID=666964 RepID=UPI00145995B1)

HSP 1 Score: 156 bits (395), Expect = 1.280e-46
Identity = 83/118 (70.34%), Postives = 94/118 (79.66%), Query Frame = 0
Query:    5 TFTITELAREFGLTTRAIRFYEDHGLIAPSRAGRNRVYGNRDKVRLKLTLRGKRLGLSLLEIRELIDMYDAARDERAQVERLQEVLRKRRSILEQQREDIEVVLGEIAAFEAQCGKFL 122
            T+TITELAREF +T RAIRFYEDHGL+ P+RAGR RVY   D+ RLKLTLRGKRLGLSL EIRELIDMYD  R+   Q+ERL +VL +RR+ LEQQRED+E VLGEIA  E QC   L
Sbjct:    6 TYTITELAREFNVTPRAIRFYEDHGLLTPARAGRARVYSKADRTRLKLTLRGKRLGLSLAEIRELIDMYDGVRNSAPQLERLLKVLAERRATLEQQREDLEAVLGEIAMLEVQCTNLL 123          
BLAST of mRNA_P-wetherbeei_contig52737.1.1 vs. uniprot
Match: A0A838LY92_9RHOO (MerR family DNA-binding transcriptional regulator n=1 Tax=Rhodocyclaceae bacterium TaxID=1898103 RepID=A0A838LY92_9RHOO)

HSP 1 Score: 154 bits (388), Expect = 1.090e-45
Identity = 86/133 (64.66%), Postives = 100/133 (75.19%), Query Frame = 0
Query:    1 MADTTFTITELAREFGLTTRAIRFYEDHGLIAPSRAGRNRVYGNRDKVRLKLTLRGKRLGLSLLEIRELIDMYDAARDERAQVERLQEVLRKRRSILEQQREDIEVVLGEIAAFEAQCGKFLDAGKKAPKARK 133
            M + T+TITELAREF LT RAIR+YED GLI P RAG  RVY  RD+ RL+LTLRGKRLGLSL  IRELIDMYD A D+ +Q+ +L EVL +RR+ LEQQREDI  VL EI AFE QC   LDA +K  + R+
Sbjct:    1 MIEPTYTITELAREFELTPRAIRYYEDQGLITPQRAGVQRVYTKRDRTRLRLTLRGKRLGLSLAAIRELIDMYDTAPDQSSQLVKLLEVLARRRAKLEQQREDIAAVLEEIDAFEQQCRGLLDAAEKPARRRR 133          
BLAST of mRNA_P-wetherbeei_contig52737.1.1 vs. uniprot
Match: A0A5C7EM26_9PROT (MerR family DNA-binding transcriptional regulator n=1 Tax=Pelomicrobium methylotrophicum TaxID=2602750 RepID=A0A5C7EM26_9PROT)

HSP 1 Score: 153 bits (387), Expect = 1.920e-45
Identity = 84/131 (64.12%), Postives = 101/131 (77.10%), Query Frame = 0
Query:    1 MADTTFTITELAREFGLTTRAIRFYEDHGLIAPSRAGRNRVYGNRDKVRLKLTLRGKRLGLSLLEIRELIDMYDAARDERAQVERLQEVLRKRRSILEQQREDIEVVLGEIAAFEAQCGKFLD--AGKKAP 129
            M   T+TITELAREF +TTR IRFYED GL+ PSR GR RVY +RD+VRLKLTLRGKRLG SL EI+EL D+YD+AR E AQ+E+   +L KRR+ LEQQR+DI+ +L EIAAFE QC + L+  AG   P
Sbjct:    7 MKKATYTITELAREFDVTTRTIRFYEDQGLLNPSRNGRRRVYSHRDRVRLKLTLRGKRLGFSLSEIKELFDLYDSARGEIAQLEQFLIILGKRRAALEQQRQDIDAMLAEIAAFEKQCRRMLEEKAGANRP 137          
BLAST of mRNA_P-wetherbeei_contig52737.1.1 vs. uniprot
Match: A0A5C1E5U4_9RHOO (Transcriptional regulator, MerR family n=1 Tax=Oryzomicrobium terrae TaxID=1735038 RepID=A0A5C1E5U4_9RHOO)

HSP 1 Score: 150 bits (379), Expect = 3.150e-44
Identity = 82/119 (68.91%), Postives = 95/119 (79.83%), Query Frame = 0
Query:    5 TFTITELAREFGLTTRAIRFYEDHGLIAPSRAGRNRVYGNRDKVRLKLTLRGKRLGLSLLEIRELIDMYDAAR-DERAQVERLQEVLRKRRSILEQQREDIEVVLGEIAAFEAQCGKFL 122
            T+TI+ELAREF +T R IR+YED GLIAPSR GRNRVY  RD++RLKL LRGKRLG+SL EIRE+IDMYD  R DE  Q+ R  +VL+KRR+ L QQREDIE VLGEI  FEAQC + L
Sbjct:    6 TYTISELAREFDITPRTIRYYEDQGLIAPSREGRNRVYSRRDRIRLKLALRGKRLGISLAEIREMIDMYDIGRGDEVHQLARFLDVLQKRRAALLQQREDIEAVLGEIDTFEAQCRQML 124          
BLAST of mRNA_P-wetherbeei_contig52737.1.1 vs. uniprot
Match: A0A7Y8M4K1_9RHOO (MerR family DNA-binding transcriptional regulator n=1 Tax=Rhodocyclaceae bacterium TaxID=1898103 RepID=A0A7Y8M4K1_9RHOO)

HSP 1 Score: 149 bits (377), Expect = 4.810e-44
Identity = 82/123 (66.67%), Postives = 98/123 (79.67%), Query Frame = 0
Query:    4 TTFTITELAREFGLTTRAIRFYEDHGLIAPSRAGRNRVYGNRDKVRLKLTLRGKRLGLSLLEIRELIDMYDAARDERAQVERLQEVLRKRRSILEQQREDIEVVLGEIAAFEAQCGKFLDAGK 126
            T+++I +LAREFG+T R IR+YED GL+ P+RAG  R+Y  RD+ RLKLTLRGKRLGLSL EIRELIDMYD A  E +Q+ RL EVL ++R+ L QQREDIE VLGE+ AFEAQC   LDAGK
Sbjct:    6 TSYSIADLAREFGVTPRTIRYYEDQGLLNPARAGGQRIYSKRDRTRLKLTLRGKRLGLSLAEIRELIDMYDTA-PETSQLARLIEVLGRQRAKLIQQREDIEAVLGELDAFEAQCRALLDAGK 127          
BLAST of mRNA_P-wetherbeei_contig52737.1.1 vs. uniprot
Match: A0A2N2TKS3_9PROT (MerR family transcriptional regulator n=1 Tax=Betaproteobacteria bacterium HGW-Betaproteobacteria-14 TaxID=2013705 RepID=A0A2N2TKS3_9PROT)

HSP 1 Score: 149 bits (375), Expect = 1.060e-43
Identity = 80/118 (67.80%), Postives = 92/118 (77.97%), Query Frame = 0
Query:    5 TFTITELAREFGLTTRAIRFYEDHGLIAPSRAGRNRVYGNRDKVRLKLTLRGKRLGLSLLEIRELIDMYDAARDERAQVERLQEVLRKRRSILEQQREDIEVVLGEIAAFEAQCGKFL 122
            TFTITELAREF LT RAIR+YED GLIAP RAG+NRVY  RD+ RLKLTLRG+RLGLSL EIRELID+YD  RD+R Q+ +   VL  RR+ LEQQREDIE VL EI + E +  + L
Sbjct:    6 TFTITELAREFDLTPRAIRYYEDQGLIAPQRAGQNRVYSKRDRTRLKLTLRGRRLGLSLAEIRELIDLYDVGRDQRTQLSKFLAVLAARRAALEQQREDIEAVLTEIVSLEQRAHELL 123          
BLAST of mRNA_P-wetherbeei_contig52737.1.1 vs. uniprot
Match: A0A5H2YF60_9RHOO (HTH merR-type domain-containing protein n=3 Tax=Betaproteobacteria TaxID=28216 RepID=A0A5H2YF60_9RHOO)

HSP 1 Score: 150 bits (378), Expect = 1.420e-43
Identity = 83/130 (63.85%), Postives = 97/130 (74.62%), Query Frame = 0
Query:    2 ADTTFTITELAREFGLTTRAIRFYEDHGLIAPSRAGRNRVYGNRDKVRLKLTLRGKRLGLSLLEIRELIDMYDAARDERAQVERLQEVLRKRRSILEQQREDIEVVLGEIAAFEAQCGKFLDAGKKAPKA 131
            A  TFTI++LAREF +T R IRF+ED GL+AP+R GRNRVY  RD+ RLKL LRGKRLGLSL EIR+LIDMYD ARDE  Q+ RL +VL +RR+ LEQQREDIE VL EI   EA C + L   +   KA
Sbjct:   37 ATPTFTISDLAREFNITPRTIRFWEDQGLLAPNREGRNRVYTKRDRTRLKLALRGKRLGLSLAEIRDLIDMYDVARDETDQLTRLLDVLSERRAALEQQREDIEAVLAEIETIEAVCREHLVEAEALEKA 166          
BLAST of mRNA_P-wetherbeei_contig52737.1.1 vs. uniprot
Match: A0A2T4ICX1_9RHOO (MerR family transcriptional regulator n=1 Tax=Thauera lacus TaxID=2136175 RepID=A0A2T4ICX1_9RHOO)

HSP 1 Score: 148 bits (373), Expect = 2.820e-43
Identity = 83/132 (62.88%), Postives = 97/132 (73.48%), Query Frame = 0
Query:    2 ADTTFTITELAREFGLTTRAIRFYEDHGLIAPSRAGRNRVYGNRDKVRLKLTLRGKRLGLSLLEIRELIDMYDAARDERAQVERLQEVLRKRRSILEQQREDIEVVLGEIAAFEAQCGKFL-DAGKKAPKAR 132
            ++ TFTITELAREF +T RAIRFYED GL+ P+R GR+RVYG  D+ RL+LTLRGKRLGLSL EI+ELIDMYD  R+   Q++R Q VL +RR  LEQQREDIE VL EI   E QC   L D    A +AR
Sbjct:    3 SEQTFTITELAREFDVTPRAIRFYEDQGLLTPARCGRSRVYGKADRTRLRLTLRGKRLGLSLAEIKELIDMYDGVRNSVPQLQRFQRVLSERRGALEQQREDIEAVLAEIDMLERQCVALLGDNAAGAEQAR 134          
BLAST of mRNA_P-wetherbeei_contig52737.1.1 vs. uniprot
Match: W0SC78_9PROT (Putative transcriptional regulator n=2 Tax=Betaproteobacteria TaxID=28216 RepID=W0SC78_9PROT)

HSP 1 Score: 147 bits (371), Expect = 4.730e-43
Identity = 80/130 (61.54%), Postives = 99/130 (76.15%), Query Frame = 0
Query:    5 TFTITELAREFGLTTRAIRFYEDHGLIAPSRAGRNRVYGNRDKVRLKLTLRGKRLGLSLLEIRELIDMYDAARDERAQVERLQEVLRKRRSILEQQREDIEVVLGEIAAFEAQCGKFL--DAGKKAPKAR 132
            T TITELAREFG+TTRAIR++E HGL++P+R G NR+Y  RD+ RLKL LRGKRLGLSL EI++LIDMYD A DE +Q+      L +RR+ LEQQR+DI+ VL EIA FE QC + L  D GK A ++R
Sbjct:    4 TQTITELAREFGVTTRAIRYWESHGLVSPAREGGNRIYSKRDQTRLKLALRGKRLGLSLAEIKDLIDMYDTAEDESSQLLSFLGALAQRRAALEQQRDDIQAVLKEIARFERQCREMLKSDEGKSASRSR 133          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52737.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001986CDD93.620e-6887.50MerR family DNA-binding transcriptional regulator ... [more]
UPI00145995B11.280e-4670.34MerR family DNA-binding transcriptional regulator ... [more]
A0A838LY92_9RHOO1.090e-4564.66MerR family DNA-binding transcriptional regulator ... [more]
A0A5C7EM26_9PROT1.920e-4564.12MerR family DNA-binding transcriptional regulator ... [more]
A0A5C1E5U4_9RHOO3.150e-4468.91Transcriptional regulator, MerR family n=1 Tax=Ory... [more]
A0A7Y8M4K1_9RHOO4.810e-4466.67MerR family DNA-binding transcriptional regulator ... [more]
A0A2N2TKS3_9PROT1.060e-4367.80MerR family transcriptional regulator n=1 Tax=Beta... [more]
A0A5H2YF60_9RHOO1.420e-4363.85HTH merR-type domain-containing protein n=3 Tax=Be... [more]
A0A2T4ICX1_9RHOO2.820e-4362.88MerR family transcriptional regulator n=1 Tax=Thau... [more]
W0SC78_9PROT4.730e-4361.54Putative transcriptional regulator n=2 Tax=Betapro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 66..117
NoneNo IPR availableGENE3D1.10.1660.10coord: 2..124
e-value: 1.4E-24
score: 88.5
NoneNo IPR availablePANTHERPTHR30204:SF58HTH-TYPE TRANSCRIPTIONAL REGULATOR YFMPcoord: 4..106
NoneNo IPR availablePANTHERPTHR30204REDOX-CYCLING DRUG-SENSING TRANSCRIPTIONAL ACTIVATOR SOXRcoord: 4..106
NoneNo IPR availableCDDcd04776HTH_GnyRcoord: 6..123
e-value: 3.98664E-52
score: 158.848
IPR000551MerR-type HTH domainSMARTSM00422merrmega3coord: 6..73
e-value: 8.7E-15
score: 65.1
IPR000551MerR-type HTH domainPFAMPF13411MerR_1coord: 6..71
e-value: 4.9E-15
score: 55.4
IPR000551MerR-type HTH domainPROSITEPS50937HTH_MERR_2coord: 5..72
score: 20.320412
IPR009061Putative DNA-binding domain superfamilySUPERFAMILY46955Putative DNA-binding domaincoord: 6..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig52737contigP-wetherbeei_contig52737:126..527 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig52737.1.1mRNA_P-wetherbeei_contig52737.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig52737 123..527 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig52737.1.1 ID=prot_P-wetherbeei_contig52737.1.1|Name=mRNA_P-wetherbeei_contig52737.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=134bp
MADTTFTITELAREFGLTTRAIRFYEDHGLIAPSRAGRNRVYGNRDKVRL
KLTLRGKRLGLSLLEIRELIDMYDAARDERAQVERLQEVLRKRRSILEQQ
REDIEVVLGEIAAFEAQCGKFLDAGKKAPKARK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000551MerR-type_HTH_dom
IPR009061DNA-bd_dom_put_sf