mRNA_P-wetherbeei_contig1236.3.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1236.3.2 vs. uniprot
Match: D7G7G8_ECTSI (Similar to vacuolar protein sorting 24 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7G8_ECTSI) HSP 1 Score: 150 bits (379), Expect = 1.970e-41 Identity = 93/206 (45.15%), Postives = 125/206 (60.68%), Query Frame = 1
Query: 1 WKRTIQREVRALDXXXXXXXXXXXXXXXXXXILAKQATM------LLCRPSSFSRRIWRQVRATKARLYEGRAQMNSVNMQLQQQLALIKVSGCMKKSAEVMAAVGKLVKIPELQQTMTDLAREMERAGLVEEIVTEGLEALDGDSVESDAALEVDRVVAELTAGLLVGAVDAPTGVPQQEVQQQEVGTEEDTGEMEEMKARLQSL 600
W+R+I EVRAL+ +AK+ T LL + SR K R++EG+AQ++SV MQLQ Q+ALIKV+G +KKS E+MA++G LVKIPELQ+ M LA EMERAGLVEE+V +GL D + +++ A EVD+V+AE+T G+L GAVDAPT VP+ E+ + MKARL+SL
Sbjct: 18 WRRSINHEVRALERQIVSLERAEKKVQKDIKTMAKEGTRNEKAIRLLAKELVMSRN-------AKNRMHEGKAQLHSVQMQLQNQIALIKVTGVIKKSTEIMASIGDLVKIPELQENMFQLATEMERAGLVEEVVADGLSLTDAEGLDAQADAEVDKVIAEITEGVLEGAVDAPTAVPEPAAVAAXXXXAEEEEKANAMKARLESL 216
BLAST of mRNA_P-wetherbeei_contig1236.3.2 vs. uniprot
Match: A0A8J2S9J1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S9J1_9STRA) HSP 1 Score: 139 bits (349), Expect = 5.710e-37 Identity = 85/200 (42.50%), Postives = 121/200 (60.50%), Query Frame = 1
Query: 1 WKRTIQREVRALDXXXXXXXXXXXXXXXXXXILAKQATMLLCRPSSFSRRIWRQVRATKARLYEGRAQMNSVNMQLQQQLALIKVSGCMKKSAEVMAAVGKLVKIPELQQTMTDLAREMERAGLVEEIVTEGLEALDGDSVESDAALEVDRVVAELTAGLLVGAVDAPTGVPQQEVQQQEVGTEEDTGEMEEMKARLQSL 600
W+R +++E RA+D K+ C+ +R I R RA + R+ +AQ+NSVNMQLQ Q A+++ +GCMKKS EVM + KLVK+PELQ+TM ++ REMER+GL+EE+V + L+ LDGD VE + L+V++VV EL L G DAP +P+Q Q V E +++ MKARLQ+L
Sbjct: 22 WRRELRKEQRAMDREISKLEQMERKSRDECRKYGKEGRQDACK--IVAREIVR-TRAARNRMLMAKAQINSVNMQLQTQAAMVRAAGCMKKSTEVMRCMNKLVKLPELQKTMMEMQREMERSGLIEEVVGDALDELDGDDVEEETELQVNKVVEELAGDLFKGQTDAPETLPEQ----QAVEPAEADDDLDTMKARLQAL 214
BLAST of mRNA_P-wetherbeei_contig1236.3.2 vs. uniprot
Match: A0A835ZDQ5_9STRA (Vacuolar protein-like protein sorting 24 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDQ5_9STRA) HSP 1 Score: 136 bits (342), Expect = 5.070e-36 Identity = 85/183 (46.45%), Postives = 115/183 (62.84%), Query Frame = 1
Query: 1 WKRTIQREVRALDXXXXXXXXXXXXXXXXXXILAKQATMLLCRPSSFSRRIWRQV---RATKARLYEGRAQMNSVNMQLQQQLALIKVSGCMKKSAEVMAAVGKLVKIPELQQTMTDLAREMERAGLVEEIVTEGLEALDGDSVESDAALEVDRVVAELTAGLLVGAVDAPTGVPQQEVQQQE 540
W RT+ RE+R ++ LAK+ + R R + RQ+ R TK R+YEG+ Q++SV MQL+ QLAL+KV+GC+ KS EVM +GKLV IPELQ TMTDLAREMERAGL EEI+ + +E G + E + EV++V+AE+TA + GA +AP G PQ +V +QE
Sbjct: 12 WNRTMNREIRTIERQIKSMDNEEAKLVRDIKKLAKEGS----RNERAVRVLARQMVTLRQTKTRMYEGKVQIHSVQMQLKNQLALVKVTGCLSKSTEVMQMMGKLVSIPELQATMTDLAREMERAGLTEEILGDAMEDTMGTN-EDEVDQEVEKVLAEITATTMAGAEEAPVGEPQVQVAEQE 189
BLAST of mRNA_P-wetherbeei_contig1236.3.2 vs. uniprot
Match: F0Y4L7_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4L7_AURAN) HSP 1 Score: 121 bits (304), Expect = 6.850e-31 Identity = 70/160 (43.75%), Postives = 102/160 (63.75%), Query Frame = 1
Query: 1 WKRTIQREVRALDXXXXXXXXXXXXXXXXXXILAKQATMLLCRPSSFSRRIWRQVRATKARLYEGRAQMNSVNMQLQQQLALIKVSGCMKKSAEVMAAVGKLVKIPELQQTMTDLAREMERAGLVEEIVTEGLEALDGDSVESDAALEVDRVVAELTAGL 480
WKR + +E R ++ LAK + C+ ++ I R RA + RL R Q++SV+MQLQ Q A+++ +GCMKKS EVMA + +LVK+PELQ+TM ++ REMERAGLV+E++ + ++ +DGD +E D A+EVD+VVAELT L
Sbjct: 5 WKRELAKEGRQMEREIRKMEEAENKSKAECQKLAKAGRVDACK--IIAKEIVR-TRAARERLLVARTQISSVSMQLQTQAAMVRAAGCMKKSGEVMAVMNQLVKLPELQKTMMNMQREMERAGLVDEMIQDSMDMMDGDDIEDDTAVEVDKVVAELTGDL 161
BLAST of mRNA_P-wetherbeei_contig1236.3.2 vs. uniprot
Match: A0A7S2FG68_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FG68_9STRA) HSP 1 Score: 113 bits (282), Expect = 4.380e-27 Identity = 60/120 (50.00%), Postives = 85/120 (70.83%), Query Frame = 1
Query: 163 VRATKAR--LYEGRAQMNSVNMQLQQQLALIKVSGCMKKSAEVMAAVGKLVKIPELQQTMTDLAREMERAGLVEEIVTEGLEALDGDSVESDAALEVDRVVAELTAGLLVGAVDAPTGVP 516
VRA KA+ +Y RA MN+++ Q++ QLA+ K +GCM++SAEVM + L++ + M LAREME+AG++EEI+ EGLE +DGD +E +AA EVD+VV+ELT GL GA P +P
Sbjct: 54 VRARKAKENMYNSRAMMNNMSNQMKMQLAITKTAGCMQRSAEVMGVMNNLMQTGTMTADMHSLAREMEKAGMIEEIMNEGLEQIDGDDIEDEAAQEVDKVVSELTVGLFSGAEVVPEAIP 173
BLAST of mRNA_P-wetherbeei_contig1236.3.2 vs. uniprot
Match: UPI000A2A920C (charged multivesicular body protein 3 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A920C) HSP 1 Score: 111 bits (277), Expect = 2.780e-26 Identity = 73/200 (36.50%), Postives = 120/200 (60.00%), Query Frame = 1
Query: 1 WKRTIQREVRALDXXXXXXXXXXXXXXXXXXILAKQATMLLCRPSSFSRRIWRQVRATKARLYEGRAQMNSVNMQLQQQLALIKVSGCMKKSAEVMAAVGKLVKIPELQQTMTDLAREMERAGLVEEIVTEGLEALDGDSVESDAALEVDRVVAELTAGLLVGAVDAPTGVPQQEVQQQEVGTEEDTGEMEEMKARLQSL 600
W ++++E R LD AK+ +CR ++ + +A +++Y +AQ+NSV M ++ QLA I+++G M+KSAEVMA + KLVK+PE+Q TMT+L++EM +AG++EE++ + E L+ D +E A EV++++ E+TAG+L A A T +P E EED M+EM++RL++L
Sbjct: 19 WSASLRKEGRVLDRQIRAIKNEEMKVQRSIKDAAKKGDKDVCR--ILAKELINSRKAV-SKMYASKAQLNSVEMSMKTQLATIRMAGAMEKSAEVMAYMQKLVKVPEIQATMTELSKEMMKAGIIEEMLEDTFEGLEDDDLEEAADEEVEKILFEVTAGVLGNAEHATTPLPTGAEGVSEPEPEED---MDEMRSRLEAL 212
BLAST of mRNA_P-wetherbeei_contig1236.3.2 vs. uniprot
Match: A0A1Y1Z736_9FUNG (Charged multivesicular body protein 3 n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Z736_9FUNG) HSP 1 Score: 110 bits (276), Expect = 3.530e-26 Identity = 75/200 (37.50%), Postives = 120/200 (60.00%), Query Frame = 1
Query: 1 WKRTIQREVRALDXXXXXXXXXXXXXXXXXXILAKQATMLLCRPSSFSRRIWRQVRATKARLYEGRAQMNSVNMQLQQQLALIKVSGCMKKSAEVMAAVGKLVKIPELQQTMTDLAREMERAGLVEEIVTEGLEALDGDSVESDAALEVDRVVAELTAGLLVGAVDAPTGVPQQEVQQQEVGTEEDTGEMEEMKARLQSL 600
W+++I+ + R LD LAK+ + C+ ++ + R R K R++ +AQ+NS+ MQLQQQLA +KV+G ++KS EVM V +LVK+PE+ QTM +A EM +AG++EE++ + L+A + + +E +A EV++V+ ++T GLL A P G P Q E EE+ E++EM+ARL +L
Sbjct: 19 WRQSIRAQERTLDRQIRGIESEEVKIKRSMKQLAKKKDITNCK--MLAKELVRS-RKQKDRIHTSKAQLNSILMQLQQQLATLKVAGSLQKSTEVMTLVNRLVKLPEISQTMETMAMEMTKAGIMEEMIGDTLDAFEDEDIEEEADEEVNKVLFQVTEGLLGEAT--PVGAPLQS----EAEPEEEP-ELDEMQARLSAL 208
BLAST of mRNA_P-wetherbeei_contig1236.3.2 vs. uniprot
Match: A0A2G8JCC5_STIJA (Putative charged multivesicular body protein 3 isoform X3 n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8JCC5_STIJA) HSP 1 Score: 107 bits (266), Expect = 1.150e-24 Identity = 71/201 (35.32%), Postives = 116/201 (57.71%), Query Frame = 1
Query: 1 WKRTIQREVRALDXXXXXXXXXXXXXXXXXXILAKQATMLLCRPSSFSRRIWRQVRATKARLYEGRAQMNSVNMQLQQQLALIKVSGCMKKSAEVMAAVGKLVKIPELQQTMTDLAREMERAGLVEEIVTEGLEALDG-DSVESDAALEVDRVVAELTAGLLVGAVDAPTGVPQQEVQQQEVGTEEDTGEMEEMKARLQSL 600
W + ++ R LD AKQ +C ++ ++ I R R K R+Y +AQ+NSV+MQ++ Q A+++V+G ++KS +VM A+ L KIP++Q+TM +L++EM +AG++EE+V + E+LD D +E A EVD+V++ELTAG L A T + + + E D E E+M+ RL++L
Sbjct: 15 WTTALNKQSRELDRQIRSIEREEAKVKKSLKDAAKQGHKEVC--TTLAKEIVRS-RKAKNRIYTSKAQINSVSMQMKNQQAMLRVNGAIQKSTDVMKAMQSLCKIPQIQETMRELSKEMMKAGIIEEMVEDTFESLDDQDELEDAAQEEVDKVLSELTAGALANVPSAVTDDLPEAMGATAMSDESDEEESEDMQRRLEAL 212
BLAST of mRNA_P-wetherbeei_contig1236.3.2 vs. uniprot
Match: A0A433PQA2_9FUNG (Vacuolar sorting protein VPS24 n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PQA2_9FUNG) HSP 1 Score: 107 bits (266), Expect = 1.330e-24 Identity = 68/202 (33.66%), Postives = 123/202 (60.89%), Query Frame = 1
Query: 1 WKRTIQREVRALDXXXXXXXXXXXXXXXXXXILAKQATMLLCRPSSFSRRIWRQVRATKARLYEGRAQMNSVNMQLQQQLALIKVSGCMKKSAEVMAAVGKLVKIPELQQTMTDLAREMERAGLVEEIVTEGLEALDGDSVESDAALEVDRVVAELTAGLL--VGAVDAPTGVPQQEVQQQEVGTEEDTGEMEEMKARLQSL 600
W++ I+ + RAL+ LAK+ C + ++ + R R K RLY +AQ+NS+ MQL QL+ +K++G ++KS+E+M V ++V++PE+ Q M +++ EM +AG+++E++ + +E+LD + +E++A EV++V+ ++T GLL VG V AP VP+ ++E E+ E++ M+ RLQ+L
Sbjct: 24 WRQDIRAQERALERQLRGIEGEELKVKKSLKALAKRGDKKAC--MTLAKELVRSKRH-KERLYTSKAQLNSIVMQLNNQLSTLKIAGVLQKSSEIMKLVNQVVRLPEISQAMQEMSMEMMKAGIMDEMIQDTMESLDDEDLEAEADEEVNKVLFQVTDGLLGEVGQVGAPLEVPELPASEEE----EEEPELDIMQKRLQAL 218
BLAST of mRNA_P-wetherbeei_contig1236.3.2 vs. uniprot
Match: UPI001BB206FD (charged multivesicular body protein 3-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB206FD) HSP 1 Score: 105 bits (263), Expect = 3.420e-24 Identity = 59/147 (40.14%), Postives = 95/147 (64.63%), Query Frame = 1
Query: 160 QVRATKARLYEGRAQMNSVNMQLQQQLALIKVSGCMKKSAEVMAAVGKLVKIPELQQTMTDLAREMERAGLVEEIVTEGLEALDGDSVESDAALEVDRVVAELTAGLLVGAVDAPTGVPQQEVQQQEVGTEEDTGEMEEMKARLQSL 600
Q R K R+Y +A +NSV+MQ++ QLA +++SG M+KS EVM + LVK+PE+Q TM DL++EM +AG++EE++ + E+LD D E E+++V+ ELT+G L A + T +P+ E +++ M+ARL++L
Sbjct: 69 QSRKAKNRIYTSKAHLNSVDMQMKNQLATLRISGAMQKSTEVMKVMQSLVKVPEIQATMMDLSKEMMKAGIIEEMMEDTFESLDDDIEEEATQAEIEKVLFELTSGALSTAPEVDTKLPEGATAGPESEEXXXXXDLQAMQARLEAL 215 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1236.3.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1236.3.2 >prot_P-wetherbeei_contig1236.3.2 ID=prot_P-wetherbeei_contig1236.3.2|Name=mRNA_P-wetherbeei_contig1236.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=183bp MEREEKKVEREIKILAKQATMLLCRPSSFSRRIWRQVRATKARLYEGRAQback to top mRNA from alignment at P-wetherbeei_contig1236:4513..6603- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1236.3.2 ID=mRNA_P-wetherbeei_contig1236.3.2|Name=mRNA_P-wetherbeei_contig1236.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2091bp|location=Sequence derived from alignment at P-wetherbeei_contig1236:4513..6603- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1236:4513..6603- >mRNA_P-wetherbeei_contig1236.3.2 ID=mRNA_P-wetherbeei_contig1236.3.2|Name=mRNA_P-wetherbeei_contig1236.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=549bp|location=Sequence derived from alignment at P-wetherbeei_contig1236:4513..6603- (Phaeothamnion wetherbeei SAG_119_79)back to top |