mRNA_P-wetherbeei_contig527.6.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig527.6.1 vs. uniprot
Match: D8LQH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQH1_ECTSI) HSP 1 Score: 154 bits (388), Expect = 9.850e-40 Identity = 99/214 (46.26%), Postives = 128/214 (59.81%), Query Frame = 1
Query: 10 RFRSLEAAVFPFLLLPAVPLALQPPVLGLLLRLLEADPLNAALMCHVRMPLLLLKLAVRLPTHEQVRLPPVLLL---LLAYSLRPQDARLLFGLAALEPAAWTELAAVRLAA-APLGPAEEA--GEGAAGRGDGS------------------GGELQMQMLYVIGTVVETAVPACFFHLDGSLSGGLFSDPLDRFPSVKTGYSLSLWVRPTAF 579
+FR LEAAVFPFLLLP VP QP L RLL+A+P NAA +CH+R+PL L+KL RLP ++ L L+++ + P DA LF LA+L+P+AW L +R+ + A A A G G A DG+ GELQMQ+LYVIGTVV++ PA FFH+DG GL S+PL RFP + GYSLS+W+RP+ F
Sbjct: 1263 KFRGLEAAVFPFLLLPLVPSEHQPQAAAQLSRLLDANPANAAALCHLRVPLALIKLGCRLPERKKQARDLYFHLSAQLMSHHISPADALELFHLASLQPSAWARLGRLRVTSGADFISARHAVGGGGLAAAEDGAPEIVDEVRVEHGVVMPPHAGELQMQLLYVIGTVVDSPAPAWFFHMDGGGGSGLVSEPLVRFPPKRVGYSLSMWLRPSGF 1476
BLAST of mRNA_P-wetherbeei_contig527.6.1 vs. uniprot
Match: A0A6H5K3Z3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Z3_9PHAE) HSP 1 Score: 148 bits (374), Expect = 7.340e-38 Identity = 98/214 (45.79%), Postives = 125/214 (58.41%), Query Frame = 1
Query: 10 RFRSLEAAVFPFLLLPAVPLALQPPVLGLLLRLLEADPLNAALMCHVRMPLLLLKLAVRLPTHEQVRLPPVLLL---LLAYSLRPQDARLLFGLAALEPAAWTELAAVR------------------LAAAPLGPAEEAGEGAAGRG---DGSGGELQMQMLYVIGTVVETAVPACFFHLDGSLSGGLFSDPLDRFPSVKTGYSLSLWVRPTAF 579
+FR LEAAVFPFLLLP VP QP + L RLL+A+P NAA +CH+R+PL LLKL RLP ++ L L+++ + P DA LF LA+L+P+AW L +R LAAA G E E G ELQMQ+L VIGTVV++ PA FFH+DG+ GL S+PL RFP + GYSLS+W+RP+ F
Sbjct: 1463 KFRGLEAAVFPFLLLPLVPSEHQPQAVAQLSRLLDANPANAAALCHLRVPLALLKLGCRLPERKKQARDLYFHLSAQLMSHHISPADALELFHLASLQPSAWARLGRLRVTSGADLISARHAVGVGGLAAAEDGAPEIVDEVRVEHGVVMPPHADELQMQLLCVIGTVVDSPAPAWFFHMDGAGGSGLVSEPLVRFPPKRVGYSLSMWLRPSGF 1676
BLAST of mRNA_P-wetherbeei_contig527.6.1 vs. uniprot
Match: Q54JH9_DICDI (Uncharacterized protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54JH9_DICDI) HSP 1 Score: 84.0 bits (206), Expect = 2.330e-15 Identity = 65/196 (33.16%), Postives = 98/196 (50.00%), Query Frame = 1
Query: 1 GGGRFRSLEAAVFPFLLLPAVPLALQPPVLGLLLRLLEADPLNAALMCHVRMPLLLLKLAVRLPTHEQVRLPPVLLLLLAYSLRPQDARLLFGLAALEPAAWTELAAVRLAAAPLGPAEEAGEGAAGRGDGSGG---ELQMQMLYVIGTVVETAVPACFFHLDGSLSGGLFSDPLDRFPSVKTGYSLSLWVRPTAF 579
G R RS +AA+ LLP PL Q L LL+++LE++P N ++C + LL L+ + P Q V+++L Y + P + RLLF LA P+ T +L ++ G ELQMQ+LY+IGT+ E P +F+ DG + + P+D+FPS + GY+ S W+R F
Sbjct: 1374 GRSRIRSPDAALMLVDLLPQCPLISQQLNLVLLMKILESNPQNKKMLCSSQGLKYLLNLSHQCPEELQSYYSRVIVILGLYDISPAEVRLLFDLACF-PSFDTHPHLNQLQQQQPTTLHQSSNSTGSNGKREKNRKYELQMQVLYIIGTLTERKAPPLYFNFDG-FDSCIKTGPIDKFPSARNGYTFSCWIRTNYF 1567
BLAST of mRNA_P-wetherbeei_contig527.6.1 vs. uniprot
Match: F4Q6W8_CAVFA (Uncharacterized protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4Q6W8_CAVFA) HSP 1 Score: 77.8 bits (190), Expect = 3.130e-13 Identity = 64/195 (32.82%), Postives = 96/195 (49.23%), Query Frame = 1
Query: 1 GGGRFRSLEAAVFPFLLLPAVPLALQPPVLGLLLRLLEADPLNAALMCHVRMPLLLLKLAVRLPTHEQVRLPPVLLLLLAYSLRPQDARLLFGLAALEP-AAWTELAAV-RLAAAPLGPAEEAGEGAAGRGDGSGGELQMQMLYVIGTVVETAVPACFFHLDGSLSGGLFSDPLDRFPSVKTGYSLSLWVRPTAF 579
G R RS EAA+ LLP P +Q L LL+++LE++P N +MC + LL L+ + P Q ++++L Y + P + RLLF LA + +L + R R ELQMQ+LYVIGT+ E P +F+ DG + +D+FPS++TGY+ S W++ F
Sbjct: 1290 GRTRIRSPEAALMLIDLLPQSPAMIQQHNLVLLMKILESNPQNKKMMCAAQGLKFLLYLSHQSPEETQSYYSRLIVILGLYDISPSEVRLLFDLACFPSFESHPQLESFDREQQXXXXXXXXXXXXXXSRKQ----ELQMQVLYVIGTLTERKTPPLYFNFDG-FDSSIKIGQIDKFPSIRTGYTFSCWIKTNYF 1479
BLAST of mRNA_P-wetherbeei_contig527.6.1 vs. uniprot
Match: F0ZUA4_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZUA4_DICPU) HSP 1 Score: 76.6 bits (187), Expect = 7.840e-13 Identity = 60/199 (30.15%), Postives = 98/199 (49.25%), Query Frame = 1
Query: 1 GGGRFRSLEAAVFPFLLLPAVPLALQPPVLGLLLRLLEADPLNAALMCHVRMPLLLLKLAVRLPTHEQVRLPPVLLLLLAYSLRPQDARLLFGLAALEPAAWTELAAVRLAAAPLGPAEEAGEGAAGRGDGSGG------ELQMQMLYVIGTVVETAVPACFFHLDGSLSGGLFSDPLDRFPSVKTGYSLSLWVRPTAF 579
G R RS +A++ LLP PL Q L LL+++LE++P N ++C + LL L+ + P Q ++++L Y + P + +LLF LA A ++ + G+ SG ELQMQ+LY+IGT+ E P +F+ DG + + +D+FPS ++GY+ S W++ F
Sbjct: 1239 GKSRIRSPDASLMLVDLLPQCPLISQQLNLVLLMKILESNPQNKKMLCSAQGLKYLLNLSHQCPEELQSYYSRIIVILGLYDISPVEVKLLFDLACSPTLAIDSHPTLQYQ-------NYSNSGSTPSLTNSGSKKNRKYELQMQVLYIIGTLTERKAPPLYFNFDG-FDSCIKTGTIDKFPSARSGYTFSCWIKTNYF 1429
BLAST of mRNA_P-wetherbeei_contig527.6.1 vs. uniprot
Match: UPI0006449083 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006449083) HSP 1 Score: 70.1 bits (170), Expect = 1.410e-10 Identity = 64/219 (29.22%), Postives = 103/219 (47.03%), Query Frame = 1
Query: 1 GGGRFRSLEAAVFPFLLLPAVPLALQPPVLGLLLRLLEADPLNAALMCHVRMPLLLLKLAVRLPTHEQVRLPPVLLLLLAYSLRPQDARLLFGLAALEPA--AWTELAAVR--------LAAAPLGPAEEAGEGAAGRGDGSGG----------------ELQMQMLYVIGTVVETAVPACFFHLDGSLSGGLFSDPLDRFPSVKTGYSLSLWVRPTAF 579
G + RS +AA+ LLP P +Q L LL+++LE++P N ++C + LL L+ + P Q ++++L Y + P + RLLF LA PA + +LA + L+ P+ + + G ELQMQ+LYVIGT+ E P +F+ DG + +D+FPS ++GY+ S W++ F
Sbjct: 1082 GRSKLRSPDAALMLIDLLPQSPTHIQQHNLILLMKILESNPQNKKMLCAAQGLKFLLYLSHQAPEETQSYFSRLIVILGLYDISPSEVRLLFDLACF-PAFESHPQLAQHQQHYTSTPPLSHNPINSSSGSXXXXXXNNFGESNSSTPYSTQKRERNKKHELQMQVLYVIGTLTERKAPPLYFNFDG-FDSYISVGTIDKFPSQRSGYTFSCWIKTNYF 1298
BLAST of mRNA_P-wetherbeei_contig527.6.1 vs. uniprot
Match: A0A8J4PSQ6_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PSQ6_9MYCE) HSP 1 Score: 69.3 bits (168), Expect = 2.600e-10 Identity = 61/196 (31.12%), Postives = 95/196 (48.47%), Query Frame = 1
Query: 1 GGGRFRSLEAAVFPFLLLPAVPLALQPPVLGLLLRLLEADPLNAALMCHVRMPLLLLKLAVRLPTHEQVRLPPVLLLLLAYSLRPQDARLLFGLAALEP-AAWTELAAVR--LAAAPLGPAEEAGEGAAGRGDGSGGELQMQMLYVIGTVVETAVPACFFHLDGSLSGGLFSDPLDRFPSVKTGYSLSLWVRPTAF 579
G + RS +AA+ LLP PL Q L L+++LE++P N + C + LL L+ P Q ++++L Y + P + RLLF LA + L A + ++A R ELQMQ+LYVIGT+ E P +F+ DG G+ +++FPS ++GY+ S W++ F
Sbjct: 1245 GRSKIRSPDAALMLVDLLPLCPLESQQLNLIFLMKILESNPQNKKMFCSAQGLKFLLYLSHLCPEEIQSYYSRLIVILGLYDISPSEVRLLFDLACFPSFESHPHLMAYKSNTSSAVNSMHNSNSNVDIKRERNRKYELQMQVLYVIGTLTERKAPPLYFNFDG-FESGIKLGIIEKFPSARSGYTFSCWMKTGYF 1439
BLAST of mRNA_P-wetherbeei_contig527.6.1 vs. uniprot
Match: A0A152A2C6_9MYCE (Uncharacterized protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A2C6_9MYCE) HSP 1 Score: 67.4 bits (163), Expect = 1.200e-9 Identity = 61/211 (28.91%), Postives = 93/211 (44.08%), Query Frame = 1
Query: 1 GGGRFRSLEAAVFPFLLLPAVPLALQPPVLGLLLRLLEADPLNAALMCHVRMPLLLLKLAVRLPTHEQVRLPPVLLLLLAYSLRPQDARLLFGLAAL------------------EPAAWTELAAVRLAAAPLGPAEEAGEGAAGRGDGSGGELQMQMLYVIGTVVETAVPACFFHLDGSLSGGLFSDPLDRFPSVKTGYSLSLWVRPTAF 579
G + RS +AA+ +LP Q L L+++LEA+PLN ++C + LL L+ P Q ++++L Y + P + RLLF LA +P + + G R ELQMQ+LYVIGT+ E P +F+ DG + +++FPSVK+GY+ S W+R F
Sbjct: 1144 GRSKLRSPDAALMLVDILPQCSPVAQQHNLVFLMKVLEANPLNKKMLCAAQGLKFLLYLSHLCPEETQSYYSRLIVILGLYDISPSEVRLLFDLACFPSFESHPQLNYNNLQQHQQPNIQKPQQFTSTSQSSFXXXXXXXSGRKERNRKL--ELQMQVLYVIGTLTERKTPPLYFNFDG-FESCIKIGQIEKFPSVKSGYTFSCWIRTNYF 1351
BLAST of mRNA_P-wetherbeei_contig527.6.1 vs. uniprot
Match: A0A015I2E3_RHIIW (Uncharacterized protein n=13 Tax=Rhizophagus TaxID=1129544 RepID=A0A015I2E3_RHIIW) HSP 1 Score: 65.1 bits (157), Expect = 7.360e-9 Identity = 28/59 (47.46%), Postives = 44/59 (74.58%), Query Frame = 1
Query: 403 ELQMQMLYVIGTVVETAVPACFFHLDGSLSGGLFSDPLDRFPSVKTGYSLSLWVRPTAF 579
E+QMQM+Y I + E P+C+F+ +G + G + + PLD+FPS+K GY+LS+W++ TAF
Sbjct: 1374 EIQMQMIYSIERISERMDPSCYFNFNG-VDGVVQTAPLDKFPSMKNGYTLSMWIKVTAF 1431
BLAST of mRNA_P-wetherbeei_contig527.6.1 vs. uniprot
Match: A0A397SGY6_9GLOM (Uncharacterized protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397SGY6_9GLOM) HSP 1 Score: 65.1 bits (157), Expect = 7.360e-9 Identity = 28/59 (47.46%), Postives = 44/59 (74.58%), Query Frame = 1
Query: 403 ELQMQMLYVIGTVVETAVPACFFHLDGSLSGGLFSDPLDRFPSVKTGYSLSLWVRPTAF 579
E+QMQM+Y I + E P+C+F+ +G + G + + PLD+FPS+K GY+LS+W++ TAF
Sbjct: 1380 EIQMQMIYSIERISERMDPSCYFNFNG-VDGVVQTAPLDKFPSMKNGYTLSMWIKVTAF 1437 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig527.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig527.6.1 >prot_P-wetherbeei_contig527.6.1 ID=prot_P-wetherbeei_contig527.6.1|Name=mRNA_P-wetherbeei_contig527.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=193bp GGGRFRSLEAAVFPFLLLPAVPLALQPPVLGLLLRLLEADPLNAALMCHVback to top mRNA from alignment at P-wetherbeei_contig527:8521..9468+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig527.6.1 ID=mRNA_P-wetherbeei_contig527.6.1|Name=mRNA_P-wetherbeei_contig527.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=948bp|location=Sequence derived from alignment at P-wetherbeei_contig527:8521..9468+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig527:8521..9468+ >mRNA_P-wetherbeei_contig527.6.1 ID=mRNA_P-wetherbeei_contig527.6.1|Name=mRNA_P-wetherbeei_contig527.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=579bp|location=Sequence derived from alignment at P-wetherbeei_contig527:8521..9468+ (Phaeothamnion wetherbeei SAG_119_79)back to top |