mRNA_P-wetherbeei_contig52697.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig52697.1.1 vs. uniprot
Match: A0A7X9KM19_9ACTN (NADH-quinone oxidoreductase subunit N n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X9KM19_9ACTN) HSP 1 Score: 283 bits (724), Expect = 9.960e-93 Identity = 144/183 (78.69%), Postives = 164/183 (89.62%), Query Frame = 1
Query: 1 VGFAFKISAVPFHTWAPDTYEGAPTPVTAFLSVASKAAGFVALIVLVFLAFPNASNVYEPMLWAMAGVTITVGNLLALKQTNIVRMLAYSSISQGGFILMPLAVAHRSGDD--ALRAVVTYLIIYAATNLGAFGLIIAISRKTRSGDIASLDGLFSYAPGLTVLMTGFLASLAGIPLFGGWYA 543
VGFAFK+SAVPFHTWAPDTYEGAPTPVTAFLSVASKAAGFVAL+VL+F+AFP A +VY P LW MA +T+TVGN++ALKQTNIVRMLAYSS+SQGGFILMPLAVA +G+ +LRAV+ YLIIYAATNLGAF ++IA+SRKTRSG+I+S GLF YAPGLTV+MT FLASLAGIP GGWYA
Sbjct: 88 VGFAFKVSAVPFHTWAPDTYEGAPTPVTAFLSVASKAAGFVALVVLIFIAFPLAYDVYRPFLWVMAALTMTVGNVVALKQTNIVRMLAYSSVSQGGFILMPLAVAFTNGNQGASLRAVMVYLIIYAATNLGAFAVVIAVSRKTRSGEISSFGGLFQYAPGLTVMMTIFLASLAGIPPLGGWYA 270
BLAST of mRNA_P-wetherbeei_contig52697.1.1 vs. uniprot
Match: A0A7W0TC22_9ACTN (NADH-quinone oxidoreductase subunit N n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W0TC22_9ACTN) HSP 1 Score: 273 bits (697), Expect = 7.180e-87 Identity = 139/183 (75.96%), Postives = 160/183 (87.43%), Query Frame = 1
Query: 1 VGFAFKISAVPFHTWAPDTYEGAPTPVTAFLSVASKAAGFVALIVLVFLAFPNASNVYEPMLWAMAGVTITVGNLLALKQTNIVRMLAYSSISQGGFILMPLAVAHR--SGDDALRAVVTYLIIYAATNLGAFGLIIAISRKTRSGDIASLDGLFSYAPGLTVLMTGFLASLAGIPLFGGWYA 543
VGFAFK+SAVPFHTWAPDTYEGAPTPVTAFLSVASKAAGFVAL LVF+AFPNA VY+P++W +A +T+TVGN++AL+QTNIVRMLAYSS+SQGGFILMPLAVA + + AL+AVV YL++YA TNLGAF ++IA +RKTRSG I S GLFSYAPGLTVLMT FLASLAGIP GGW+A
Sbjct: 230 VGFAFKVSAVPFHTWAPDTYEGAPTPVTAFLSVASKAAGFVALCSLVFVAFPNADGVYQPLMWVLAALTMTVGNVIALRQTNIVRMLAYSSVSQGGFILMPLAVAGTGDAAEPALKAVVVYLLVYAFTNLGAFAVVIAAARKTRSGRINSFSGLFSYAPGLTVLMTIFLASLAGIPPLGGWFA 412
BLAST of mRNA_P-wetherbeei_contig52697.1.1 vs. uniprot
Match: A0A3C2AZ38_9ACTN (NADH-quinone oxidoreductase subunit N n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2AZ38_9ACTN) HSP 1 Score: 272 bits (696), Expect = 9.370e-87 Identity = 137/183 (74.86%), Postives = 160/183 (87.43%), Query Frame = 1
Query: 1 VGFAFKISAVPFHTWAPDTYEGAPTPVTAFLSVASKAAGFVALIVLVFLAFPNASNVYEPMLWAMAGVTITVGNLLALKQTNIVRMLAYSSISQGGFILMPLAVAH--RSGDDALRAVVTYLIIYAATNLGAFGLIIAISRKTRSGDIASLDGLFSYAPGLTVLMTGFLASLAGIPLFGGWYA 543
VGFAFK+SAVPFHTWAPDTY+GAPTPVTAFLSVASKAAGF L+ +V+LAFP A +VY+P +W +A +T+TVGNLLALKQTNIVRMLAYSS+SQGGFILMPLAVA + AL+AVV YL+IYAATNLGAF ++IA++RKTRSG+I+S GLF+YAPGL V+MT FLASLAGIP GGWYA
Sbjct: 227 VGFAFKVSAVPFHTWAPDTYQGAPTPVTAFLSVASKAAGFTGLLAMVYLAFPMAHDVYQPFMWVLAALTMTVGNLLALKQTNIVRMLAYSSVSQGGFILMPLAVAGTGEAAGPALKAVVVYLLIYAATNLGAFAVVIAVARKTRSGEISSFGGLFNYAPGLAVMMTIFLASLAGIPPLGGWYA 409
BLAST of mRNA_P-wetherbeei_contig52697.1.1 vs. uniprot
Match: A0A7Y1ZUG8_9ACTN (NADH-quinone oxidoreductase subunit N n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A7Y1ZUG8_9ACTN) HSP 1 Score: 271 bits (692), Expect = 3.740e-86 Identity = 136/182 (74.73%), Postives = 157/182 (86.26%), Query Frame = 1
Query: 4 GFAFKISAVPFHTWAPDTYEGAPTPVTAFLSVASKAAGFVALIVLVFLAFPNASNVYEPMLWAMAGVTITVGNLLALKQTNIVRMLAYSSISQGGFILMPLAVAHRS--GDDALRAVVTYLIIYAATNLGAFGLIIAISRKTRSGDIASLDGLFSYAPGLTVLMTGFLASLAGIPLFGGWYA 543
GFAFKISAVPFHTWAPDTYEGAPTPVTAFLSVASKAAGFVAL+ ++FLAFPNAS+VY+P+LW +A +T+TVGN+LAL+QTNIVR+LAYSS+SQGGFILMPLA A S G AL AVV YL++Y NLGAF ++IA+SRKTRSG+I+S GLF YAPGL V MT F ASLAGIP GGW+A
Sbjct: 228 GFAFKISAVPFHTWAPDTYEGAPTPVTAFLSVASKAAGFVALVSIIFLAFPNASDVYQPLLWVLAALTMTVGNVLALRQTNIVRLLAYSSVSQGGFILMPLAFAGNSNAGGSALNAVVVYLLVYGFMNLGAFAIVIAVSRKTRSGEISSFGGLFGYAPGLAVAMTVFFASLAGIPPLGGWFA 409
BLAST of mRNA_P-wetherbeei_contig52697.1.1 vs. uniprot
Match: A0A7K0ZEC7_9ACTN (NADH-quinone oxidoreductase subunit N n=2 Tax=root TaxID=1 RepID=A0A7K0ZEC7_9ACTN) HSP 1 Score: 270 bits (689), Expect = 9.480e-86 Identity = 133/182 (73.08%), Postives = 160/182 (87.91%), Query Frame = 1
Query: 1 VGFAFKISAVPFHTWAPDTYEGAPTPVTAFLSVASKAAGFVALIVLVFLAFPNASNVYEPMLWAMAGVTITVGNLLALKQTNIVRMLAYSSISQGGFILMPLAVAHRSG--DDALRAVVTYLIIYAATNLGAFGLIIAISRKTRSGDIASLDGLFSYAPGLTVLMTGFLASLAGIPLFGGWY 540
VGFAFK+SAVPFHTWAPDTYEGAPTPVTAFLSVASKAAGFVAL+ +V++AFP + V++P+ W ++ +T+TVGN+LALKQTNIVRMLAYSS++QGGFILMPLAVA G + ALRAVVTYL++YAATNLG F +++ ++RKTRSG+IAS GLFSYAPGL LMT F+ASLAGIP FGGW+
Sbjct: 223 VGFAFKVSAVPFHTWAPDTYEGAPTPVTAFLSVASKAAGFVALVTVVYVAFPGSHEVWQPVFWILSALTMTVGNVLALKQTNIVRMLAYSSVAQGGFILMPLAVAGIDGVANSALRAVVTYLLVYAATNLGVFAIVMVVARKTRSGEIASFGGLFSYAPGLAALMTMFMASLAGIPPFGGWF 404
BLAST of mRNA_P-wetherbeei_contig52697.1.1 vs. uniprot
Match: A0A4P5R453_9ACTN (NADH-quinone oxidoreductase subunit N n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A4P5R453_9ACTN) HSP 1 Score: 268 bits (686), Expect = 2.900e-85 Identity = 133/180 (73.89%), Postives = 158/180 (87.78%), Query Frame = 1
Query: 1 VGFAFKISAVPFHTWAPDTYEGAPTPVTAFLSVASKAAGFVALIVLVFLAFPNASNVYEPMLWAMAGVTITVGNLLALKQTNIVRMLAYSSISQGGFILMPLAVAH-RSGDDALRAVVTYLIIYAATNLGAFGLIIAISRKTRSGDIASLDGLFSYAPGLTVLMTGFLASLAGIPLFGGW 537
VGFAFK+SAVPFHTWAPDTYEGAPTPVTAFLSVASKAAGF+AL+VLV AFP +V++P +W ++ +T+T+GN+ AL+QTN+VRM+AYSS+SQGGF+LMPLAVA +G+ ALRAVV YL++YAATNLG FG+I+A+SRKTRSGDIASL GLFSYAP L VL T FLASLAGIP GGW
Sbjct: 227 VGFAFKVSAVPFHTWAPDTYEGAPTPVTAFLSVASKAAGFIALVVLVLTAFPEGRDVWQPFIWVLSALTMTIGNVFALRQTNLVRMIAYSSVSQGGFVLMPLAVAGGAAGEAALRAVVVYLVVYAATNLGMFGVILAVSRKTRSGDIASLGGLFSYAPALGVLFTMFLASLAGIPPLGGW 406
BLAST of mRNA_P-wetherbeei_contig52697.1.1 vs. uniprot
Match: A0A4P5S1G7_9ACTN (NADH-quinone oxidoreductase subunit N n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A4P5S1G7_9ACTN) HSP 1 Score: 268 bits (685), Expect = 4.430e-85 Identity = 135/181 (74.59%), Postives = 159/181 (87.85%), Query Frame = 1
Query: 1 VGFAFKISAVPFHTWAPDTYEGAPTPVTAFLSVASKAAGFVALIVLVFLAFPNASNVYEPMLWAMAGVTITVGNLLALKQTNIVRMLAYSSISQGGFILMPLAVAHR--SGDDALRAVVTYLIIYAATNLGAFGLIIAISRKTRSGDIASLDGLFSYAPGLTVLMTGFLASLAGIPLFGGW 537
VGFAFKISAVPFHTWAPDTYEGAPTPVTAFLSVASKAAGFVAL+ +V++ FPNAS V++P+ W +A +T+TVGN++AL+QTNIVRMLA+SSISQGGFILMPLA+A S ALRAVVTYL++YAATNLG F ++IA++RKTRSG I+S GLFSYAPGL V+MT F+ASLAGIP GGW
Sbjct: 229 VGFAFKISAVPFHTWAPDTYEGAPTPVTAFLSVASKAAGFVALLTVVYVGFPNASEVWQPVFWILAALTMTVGNVMALRQTNIVRMLAFSSISQGGFILMPLAIAGEGDSAGAALRAVVTYLLVYAATNLGVFAVVIAVARKTRSGSISSYGGLFSYAPGLAVIMTIFMASLAGIPPLGGW 409
BLAST of mRNA_P-wetherbeei_contig52697.1.1 vs. uniprot
Match: A0A0R2QB20_9ACTN (Proton_antipo_M domain-containing protein n=2 Tax=unclassified Acidimicrobium TaxID=2646899 RepID=A0A0R2QB20_9ACTN) HSP 1 Score: 263 bits (671), Expect = 6.440e-85 Identity = 133/183 (72.68%), Postives = 158/183 (86.34%), Query Frame = 1
Query: 1 VGFAFKISAVPFHTWAPDTYEGAPTPVTAFLSVASKAAGFVALIVLVFLAFPNASNVYEPMLWAMAGVTITVGNLLALKQTNIVRMLAYSSISQGGFILMPLAVAHR--SGDDALRAVVTYLIIYAATNLGAFGLIIAISRKTRSGDIASLDGLFSYAPGLTVLMTGFLASLAGIPLFGGWYA 543
VGFAFK+SAVPFHTWAPDTYEGAPTPVTAFLSVASKAAGFVAL+VL++ AFP A ++++P +W ++ +T+T+GN+LALKQ NIVRM+AYSSISQGGF+LMPLAVA SG ALR+VV Y+I+YAATNLG F +I+A+S KTRSG+I+S GLFSYAP L VLMT FLASLAGIP GGW A
Sbjct: 72 VGFAFKVSAVPFHTWAPDTYEGAPTPVTAFLSVASKAAGFVALVVLLYTAFPLAQDIWQPFIWVLSALTMTIGNVLALKQNNIVRMIAYSSISQGGFVLMPLAVAGLAGSGTTALRSVVLYMIVYAATNLGVFAIILAVSNKTRSGEISSYGGLFSYAPTLGVLMTLFLASLAGIPPLGGWIA 254
BLAST of mRNA_P-wetherbeei_contig52697.1.1 vs. uniprot
Match: UPI000348AFE7 (NADH-quinone oxidoreductase subunit N n=1 Tax=Ilumatobacter nonamiensis TaxID=467093 RepID=UPI000348AFE7) HSP 1 Score: 267 bits (683), Expect = 9.570e-85 Identity = 137/182 (75.27%), Postives = 157/182 (86.26%), Query Frame = 1
Query: 4 GFAFKISAVPFHTWAPDTYEGAPTPVTAFLSVASKAAGFVALIVLVFLAFPNASNVYEPMLWAMAGVTITVGNLLALKQTNIVRMLAYSSISQGGFILMPLAVAHR--SGDDALRAVVTYLIIYAATNLGAFGLIIAISRKTRSGDIASLDGLFSYAPGLTVLMTGFLASLAGIPLFGGWYA 543
GFAFKISAVPFH+WAPDTYEGAPTPVTAF SVASKAAGF AL+ LVFLAFPNAS+VY PMLW +A +T+TVGN+LAL+QTNIVRMLAYSSISQGGFILMPLA A +G AL AVV YL++YA NLGAF ++IA+SRKT+SG+I+S GLF+YAPGL V MT F+ASLAGIP GGW+A
Sbjct: 231 GFAFKISAVPFHSWAPDTYEGAPTPVTAFFSVASKAAGFTALMTLVFLAFPNASDVYGPMLWVLAALTMTVGNVLALRQTNIVRMLAYSSISQGGFILMPLAYAGDVDAGGSALNAVVVYLLVYAFMNLGAFAVVIAVSRKTQSGEISSFGGLFNYAPGLAVAMTVFMASLAGIPPLGGWFA 412
BLAST of mRNA_P-wetherbeei_contig52697.1.1 vs. uniprot
Match: A0A094P991_9ACTN (NADH-quinone oxidoreductase subunit N n=1 Tax=actinobacterium acAcidi TaxID=1504320 RepID=A0A094P991_9ACTN) HSP 1 Score: 267 bits (682), Expect = 1.090e-84 Identity = 132/182 (72.53%), Postives = 159/182 (87.36%), Query Frame = 1
Query: 1 VGFAFKISAVPFHTWAPDTYEGAPTPVTAFLSVASKAAGFVALIVLVFLAFPNASNVYEPMLWAMAGVTITVGNLLALKQTNIVRMLAYSSISQGGFILMPLAVAHRSG--DDALRAVVTYLIIYAATNLGAFGLIIAISRKTRSGDIASLDGLFSYAPGLTVLMTGFLASLAGIPLFGGWY 540
+GFAFKISAVPFHTWAPDTY+GAPTPVTAFLSVASK AGFVAL+ +V++ FP +S V++P+ W ++ +T+TVGN++ALKQTNIVRMLAYSSI+QGGFILMPLAVA G + ALRAVVTYL++YAATNLG F +I+A+SRKTRSG+I+S GLFSYAPGL LMT F+ASLAGIP GGW+
Sbjct: 224 IGFAFKISAVPFHTWAPDTYQGAPTPVTAFLSVASKTAGFVALVTVVYVGFPGSSEVWQPVFWILSALTMTVGNVMALKQTNIVRMLAYSSIAQGGFILMPLAVAGEQGVAESALRAVVTYLLVYAATNLGVFAVIMAVSRKTRSGEISSYGGLFSYAPGLATLMTLFMASLAGIPPLGGWF 405 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52697.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig52697.1.1 >prot_P-wetherbeei_contig52697.1.1 ID=prot_P-wetherbeei_contig52697.1.1|Name=mRNA_P-wetherbeei_contig52697.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=181bp VGFAFKISAVPFHTWAPDTYEGAPTPVTAFLSVASKAAGFVALIVLVFLAback to top mRNA from alignment at P-wetherbeei_contig52697:1..543- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig52697.1.1 ID=mRNA_P-wetherbeei_contig52697.1.1|Name=mRNA_P-wetherbeei_contig52697.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=543bp|location=Sequence derived from alignment at P-wetherbeei_contig52697:1..543- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig52697:1..543- >mRNA_P-wetherbeei_contig52697.1.1 ID=mRNA_P-wetherbeei_contig52697.1.1|Name=mRNA_P-wetherbeei_contig52697.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=543bp|location=Sequence derived from alignment at P-wetherbeei_contig52697:1..543- (Phaeothamnion wetherbeei SAG_119_79)back to top |