mRNA_P-wetherbeei_contig52696.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig52696.1.1 vs. uniprot
Match: A0A537PQ74_9PROT (Sulfur globule protein n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537PQ74_9PROT) HSP 1 Score: 60.1 bits (144), Expect = 2.680e-10 Identity = 25/34 (73.53%), Postives = 27/34 (79.41%), Query Frame = 1
Query: 112 GPRYVGGYAYDGCYRRRVVGTPWGPRVRLVNVCY 213
GP Y+GGY Y GCY RR+V TPWGPR RLVN CY
Sbjct: 49 GPVYLGGYGYGGCYVRRLVPTPWGPRWRLVNRCY 82
BLAST of mRNA_P-wetherbeei_contig52696.1.1 vs. uniprot
Match: A0A1H0SH42_9BRAD (Uncharacterized protein n=5 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1H0SH42_9BRAD) HSP 1 Score: 58.9 bits (141), Expect = 1.070e-9 Identity = 29/42 (69.05%), Postives = 31/42 (73.81%), Query Frame = 1
Query: 97 GFRFY--GPRYVGGYAYDG-CYRRRVVGTPWGPRVRLVNVCY 213
G RFY GP Y GGY Y G CY R++VGTPWGPR RLVN CY
Sbjct: 55 GPRFYVGGPAYYGGYGYGGGCYVRQLVGTPWGPRWRLVNRCY 96
BLAST of mRNA_P-wetherbeei_contig52696.1.1 vs. uniprot
Match: M4ZV11_9BRAD (Sulfur globule protein n=1 Tax=Bradyrhizobium oligotrophicum S58 TaxID=1245469 RepID=M4ZV11_9BRAD) HSP 1 Score: 58.2 bits (139), Expect = 1.820e-9 Identity = 43/77 (55.84%), Postives = 49/77 (63.64%), Query Frame = 1
Query: 1 LALGSASLAVSTTPAXXXXXXXXXXXXXXXXXGFR-FYGPRY-VGG----YAYDGCYRRRVVGTPWGPRVRLVNVCY 213
+ALG+A+LA + A XXXXXXX R FYGPR+ VGG Y Y GCY RRVV TPWGPR RL+N CY
Sbjct: 13 VALGAAALAPTAASAHWHGGWHXXXXXXXYGGWHRPFYGPRFFVGGPAYGYGYGGCYVRRVVPTPWGPRWRLINRCY 89
BLAST of mRNA_P-wetherbeei_contig52696.1.1 vs. uniprot
Match: A0A4Q7FZB4_9BRAD (Sulfur globule protein n=4 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=A0A4Q7FZB4_9BRAD) HSP 1 Score: 57.0 bits (136), Expect = 4.390e-9 Identity = 24/34 (70.59%), Postives = 25/34 (73.53%), Query Frame = 1
Query: 112 GPRYVGGYAYDGCYRRRVVGTPWGPRVRLVNVCY 213
GP Y GG Y GCY RR+V TPWGPR RLVN CY
Sbjct: 49 GPAYYGGPGYGGCYTRRLVPTPWGPRWRLVNRCY 82
BLAST of mRNA_P-wetherbeei_contig52696.1.1 vs. uniprot
Match: A0A1E3ENY9_BRAEL (Sulfur globule protein n=33 Tax=Bradyrhizobium TaxID=374 RepID=A0A1E3ENY9_BRAEL) HSP 1 Score: 56.6 bits (135), Expect = 7.010e-9 Identity = 26/35 (74.29%), Postives = 26/35 (74.29%), Query Frame = 1
Query: 112 GPRYVGGYAYDG-CYRRRVVGTPWGPRVRLVNVCY 213
GP Y GGY Y G CY RRVV TPWGPR RLVN CY
Sbjct: 53 GPAYYGGYGYGGGCYVRRVVPTPWGPRWRLVNRCY 87
BLAST of mRNA_P-wetherbeei_contig52696.1.1 vs. uniprot
Match: A0A0D7QAW1_9BRAD (Sulfur globule protein n=1 Tax=Bradyrhizobium sp. LTSPM299 TaxID=1619233 RepID=A0A0D7QAW1_9BRAD) HSP 1 Score: 56.2 bits (134), Expect = 1.040e-8 Identity = 28/43 (65.12%), Postives = 30/43 (69.77%), Query Frame = 1
Query: 97 GFRFY--GPRYVGGYAYD--GCYRRRVVGTPWGPRVRLVNVCY 213
G RF+ GP Y GGY Y GCY RRVV TPWGPR RL+N CY
Sbjct: 47 GPRFFAGGPAYYGGYGYGSGGCYVRRVVPTPWGPRWRLINRCY 89
BLAST of mRNA_P-wetherbeei_contig52696.1.1 vs. uniprot
Match: UPI001BA8FE68 (sulfur globule protein precursor n=1 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=UPI001BA8FE68) HSP 1 Score: 55.5 bits (132), Expect = 1.900e-8 Identity = 28/41 (68.29%), Postives = 30/41 (73.17%), Query Frame = 1
Query: 97 GFRFY--GPRYVGGYAYDGCYRRRVVGTPWGPRVRLVNVCY 213
G RFY GP Y GGY DGCY RR+V TPWGPR R+VN CY
Sbjct: 47 GPRFYAGGPYYYGGY--DGCYVRRLVPTPWGPRWRVVNRCY 85
BLAST of mRNA_P-wetherbeei_contig52696.1.1 vs. uniprot
Match: H0SA35_BRAS3 (Putative Sulfur globule protein n=2 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=H0SA35_BRAS3) HSP 1 Score: 55.5 bits (132), Expect = 2.240e-8 Identity = 27/41 (65.85%), Postives = 29/41 (70.73%), Query Frame = 1
Query: 106 FYGPR-YVGG----YAYDGCYRRRVVGTPWGPRVRLVNVCY 213
FYGPR +VGG Y Y GCY RRVV TPWGPR R +N CY
Sbjct: 52 FYGPRVFVGGPAYSYGYGGCYVRRVVPTPWGPRWRWINRCY 92
BLAST of mRNA_P-wetherbeei_contig52696.1.1 vs. uniprot
Match: A0A5P6P0U2_9BRAD (Sulfur globule protein n=5 Tax=Bradyrhizobium TaxID=374 RepID=A0A5P6P0U2_9BRAD) HSP 1 Score: 55.1 bits (131), Expect = 2.890e-8 Identity = 24/39 (61.54%), Postives = 27/39 (69.23%), Query Frame = 1
Query: 97 GFRFYGPRYVGGYAYDGCYRRRVVGTPWGPRVRLVNVCY 213
G RFYG V Y Y GCY RR+V TPWGPR R++N CY
Sbjct: 50 GPRFYGRGPVVSYGYGGCYMRRLVPTPWGPRWRMINRCY 88
BLAST of mRNA_P-wetherbeei_contig52696.1.1 vs. uniprot
Match: H0T655_9BRAD (Putative Sulfur globule protein n=1 Tax=Bradyrhizobium sp. STM 3809 TaxID=551936 RepID=H0T655_9BRAD) HSP 1 Score: 55.1 bits (131), Expect = 3.030e-8 Identity = 26/41 (63.41%), Postives = 29/41 (70.73%), Query Frame = 1
Query: 106 FYGPR-YVGG----YAYDGCYRRRVVGTPWGPRVRLVNVCY 213
FYGPR +VGG Y Y GCY RR+V TPWGPR R +N CY
Sbjct: 50 FYGPRVFVGGPVYSYGYGGCYVRRIVPTPWGPRWRWINRCY 90 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52696.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig52696.1.1 >prot_P-wetherbeei_contig52696.1.1 ID=prot_P-wetherbeei_contig52696.1.1|Name=mRNA_P-wetherbeei_contig52696.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=72bp LALGSASLAVSTTPAAAWGGGWHGHHHHHFGGGFRFYGPRYVGGYAYDGCback to top mRNA from alignment at P-wetherbeei_contig52696:329..544- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig52696.1.1 ID=mRNA_P-wetherbeei_contig52696.1.1|Name=mRNA_P-wetherbeei_contig52696.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=216bp|location=Sequence derived from alignment at P-wetherbeei_contig52696:329..544- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig52696:329..544- >mRNA_P-wetherbeei_contig52696.1.1 ID=mRNA_P-wetherbeei_contig52696.1.1|Name=mRNA_P-wetherbeei_contig52696.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=216bp|location=Sequence derived from alignment at P-wetherbeei_contig52696:329..544- (Phaeothamnion wetherbeei SAG_119_79)back to top |