prot_P-wetherbeei_contig5268.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig5268.2.1
Unique Nameprot_P-wetherbeei_contig5268.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length367
Homology
BLAST of mRNA_P-wetherbeei_contig5268.2.1 vs. uniprot
Match: D7FWD2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWD2_ECTSI)

HSP 1 Score: 111 bits (277), Expect = 4.900e-24
Identity = 62/128 (48.44%), Postives = 86/128 (67.19%), Query Frame = 0
Query:   77 CQAVWVDLIQLDLSQKLPYSVQKHHVDAAAATGKFFEVCVAEAVRSPFGRRHLLQNMQALLTFGGGRRLVLSGGAEAVLQVRGPGDVANLGQLLGLSQAAAVAAVTANPASVLRRAEARRAGFRGVAV 204
            C+   VD+I L   ++LP+++ K + DAA + G  FEV  ++A+++   RR LL N +AL+TF  GR ++L+ GAE  L  R P DVANLGQLLGLSQ  ++ AV+  P +VLRRAEAR+  FRG  V
Sbjct:  149 CKDSDVDVISLPSGKRLPFNINKKNTDAALSRGAVFEVSYSQAIQNSSNRRFLLSNCEALVTFTRGRGILLASGAETWLNCRSPHDVANLGQLLGLSQEQSLRAVSDTPLAVLRRAEARKGRFRGATV 276          
BLAST of mRNA_P-wetherbeei_contig5268.2.1 vs. uniprot
Match: A0A835ZCV8_9STRA (RNase P subunit p30-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCV8_9STRA)

HSP 1 Score: 104 bits (260), Expect = 1.740e-23
Identity = 58/127 (45.67%), Postives = 80/127 (62.99%), Query Frame = 0
Query:   84 LIQLDLSQKLPYSVQKHHVDAAAATGKFFEVCVAEAVRSPFGRRHLLQNMQALLTFGGGRRLVLSGGAEAVLQVRGPGDVANLGQLLGLSQAAAVAAVTANPASVLRRAEARRAGFRGVAVGKAMGG 210
            +I +DL  +LPY +   H  +A     +FEVC    +RS   R+HL+ N + L+ F  GR L+LSG A + LQ+R P D+AN+ QLLGLS+ AA+AAV+ N   VL RAE+RRA  +G+ V    GG
Sbjct:    1 MIVIDLDSRLPYHIAAKHAASALRRNIYFEVCYGPTLRSAGARKHLINNTRGLVQFTSGRGLLLSGDANSPLQIRSPQDIANIAQLLGLSEQAALAAVSTNAQQVLLRAESRRAQHQGIMVVAEAGG 127          
BLAST of mRNA_P-wetherbeei_contig5268.2.1 vs. uniprot
Match: A0A250WQU3_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WQU3_9CHLO)

HSP 1 Score: 94.4 bits (233), Expect = 2.310e-18
Identity = 51/126 (40.48%), Postives = 76/126 (60.32%), Query Frame = 0
Query:   74 RHACQAVWVDLIQLDLSQKLPYSVQKHHVDAAAATGKFFEVCVAEAVRSPFGRRHLLQNMQALLTFGGGRRLVLSGGAEAVLQVRGPGDVANLGQLLGLSQAAAVAAVTANPASVLRRAEARRAGF 199
            + AC ++ VD+I LDL Q+LP+ ++  ++DAA      FE+  +  +R    RRHL  N QAL     GR LV+S GA  ++++RGP D+ N+G L G+SQ  A  A++ N  +VL R  AR+  F
Sbjct:  121 QQACTSLEVDIISLDLGQRLPFKLRPQYIDAACKRDVRFEIQYSSGLRDQASRRHLFSNAQALSRLLRGRNLVISSGARNMMELRGPKDIINMGTLFGMSQEKAKRAISENCEAVLARGAARKLHF 246          
BLAST of mRNA_P-wetherbeei_contig5268.2.1 vs. uniprot
Match: A0A8J9ZMY5_BRALA (RPP30 protein n=2 Tax=Branchiostoma TaxID=7737 RepID=A0A8J9ZMY5_BRALA)

HSP 1 Score: 93.6 bits (231), Expect = 3.520e-18
Identity = 51/120 (42.50%), Postives = 77/120 (64.17%), Query Frame = 0
Query:   76 ACQAVWVDLIQLDLSQKLPYSVQKHHVDAAAATGKFFEVCVAEAVRSPFGRRHLLQNMQALLTFGGGRRLVLSGGAEAVLQVRGPGDVANLGQLLGLSQAAAVAAVTANPASVLRRAEAR 195
            AC+ + VD+I LD++QKLP+ ++   +  A A G +FE+  + A+R    RR+++ N   L+TF  G+ ++LS  AE  +++RGP DVANLG L G++Q  A  AV+ N  SVL  AE R
Sbjct:   99 ACKTLEVDIITLDMTQKLPFLLKLTPIKRAIARGAYFEIVYSPAIRDSTLRRYIISNATDLMTFCKGKNIILSSQAEKAIELRGPHDVANLGVLFGMNQVQAKDAVSINCRSVLLHAETR 218          
BLAST of mRNA_P-wetherbeei_contig5268.2.1 vs. uniprot
Match: A0A6P4XU10_BRABE (ribonuclease P protein subunit p30-like n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4XU10_BRABE)

HSP 1 Score: 91.7 bits (226), Expect = 2.290e-17
Identity = 52/120 (43.33%), Postives = 76/120 (63.33%), Query Frame = 0
Query:   76 ACQAVWVDLIQLDLSQKLPYSVQKHHVDAAAATGKFFEVCVAEAVRSPFGRRHLLQNMQALLTFGGGRRLVLSGGAEAVLQVRGPGDVANLGQLLGLSQAAAVAAVTANPASVLRRAEAR 195
            AC  + VD+I LD++QKLP+ ++   +  A A G  FE+  A A+R    RR+++ N   L+TF  G+ ++LS  AE  +++RGP DVANLG L G++QA A  AV+ N  +VL  AE R
Sbjct:  119 ACHDLEVDIISLDMTQKLPFLLKLTPIKRAIARGIRFEIVYAPAIRDSTLRRYIISNATDLMTFCKGKNIILSSQAEKAIELRGPHDVANLGVLFGMNQAQAKDAVSVNCRAVLLHAETR 238          
BLAST of mRNA_P-wetherbeei_contig5268.2.1 vs. uniprot
Match: UPI0003F0B55A (ribonuclease P protein subunit p30-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F0B55A)

HSP 1 Score: 90.5 bits (223), Expect = 5.800e-17
Identity = 50/126 (39.68%), Postives = 80/126 (63.49%), Query Frame = 0
Query:   76 ACQAVWVDLIQLDLSQKLPYSVQKHHVDAAAATGKFFEVCVAEAVRSPFGRRHLLQNMQALLTFGGGRRLVLSGGAEAVLQVRGPGDVANLGQLLGLSQAAAVAAVTANPASVLRRAEARRAGFRG 201
            AC  + +D+IQ+++++K+P  ++ H V AA   G +FE+  A AVR    R++++ N  +L+    G+ +++S  AE  +++RGP DVANLG L GL++A +  AV+ N  SVL  AE RR   RG
Sbjct:  113 ACTQLDIDIIQVNMTEKMPMLIRIHPVKAALERGVYFEIVYAPAVRDSTARKNIISNALSLMFMCKGKNIIISSQAENAMEIRGPYDVANLGFLFGLNEAQSKDAVSMNCRSVLLHAETRRNTARG 238          
BLAST of mRNA_P-wetherbeei_contig5268.2.1 vs. uniprot
Match: UPI00074FF830 (ribonuclease P protein subunit p30 n=1 Tax=Gekko japonicus TaxID=146911 RepID=UPI00074FF830)

HSP 1 Score: 89.0 bits (219), Expect = 1.330e-16
Identity = 50/124 (40.32%), Postives = 78/124 (62.90%), Query Frame = 0
Query:   76 ACQAVWVDLIQLDLSQKLPYSVQKHHVDAAAATGKFFEVCVAEAVRSPFGRRHLLQNMQALLTFGGGRRLVLSGGAEAVLQVRGPGDVANLGQLLGLSQAAAVAAVTANPASVLRRAEARRAGF 199
            AC  + VDL+ +++++KLP+ +++  V+ A   G +FE+    A++    RR+ + N  +L+    G+ +VLS  AE  LQ+RGP DVANLG L GLS++ A AAV+ N  +VL   EAR+  F
Sbjct:  116 ACTTLDVDLVCINVTEKLPFYIKRPSVNVAMDRGIYFELVYVPAIKDSTMRRYTISNALSLMQICRGKNIVLSSAAEKPLQLRGPYDVANLGWLFGLSESNAKAAVSTNGRAVLLHGEARKTAF 239          
BLAST of mRNA_P-wetherbeei_contig5268.2.1 vs. uniprot
Match: UPI001C4BD0D5 (ribonuclease P protein subunit p30 isoform X2 n=1 Tax=Sceloporus undulatus TaxID=8520 RepID=UPI001C4BD0D5)

HSP 1 Score: 88.2 bits (217), Expect = 1.970e-16
Identity = 48/114 (42.11%), Postives = 75/114 (65.79%), Query Frame = 0
Query:   76 ACQAVWVDLIQLDLSQKLPYSVQKHHVDAAAATGKFFEVCVAEAVRSPFGRRHLLQNMQALLTFGGGRRLVLSGGAEAVLQVRGPGDVANLGQLLGLSQAAAVAAVTANPASVL 189
            AC  + VDL+ +D+++KLP+ +++  ++ A   G +FE+    A++    RR+ + N  +L+    G+ ++LS GAE  LQ+RGP DVANLG LLGLS+  A AAV+AN  +VL
Sbjct:  116 ACTTLDVDLVCIDVTEKLPFYIKRPSINVAIDRGIYFELLYVPAIKDSTMRRYTVSNALSLMQICRGKNIILSSGAERPLQLRGPYDVANLGWLLGLSEGNAKAAVSANCRAVL 229          
BLAST of mRNA_P-wetherbeei_contig5268.2.1 vs. uniprot
Match: U4LFV2_PYROM (Similar to Probable ribonuclease P protein subunit 3 acc. no. P87120 n=1 Tax=Pyronema omphalodes (strain CBS 100304) TaxID=1076935 RepID=U4LFV2_PYROM)

HSP 1 Score: 88.6 bits (218), Expect = 2.260e-16
Identity = 56/128 (43.75%), Postives = 76/128 (59.38%), Query Frame = 0
Query:   76 ACQAVWVDLIQLDLSQKLPYSVQKHHVDAAAATGKFFEVCVAEAVRSPFGRRHLLQNMQALL-TFGGGRRLVLSGGAEAVLQVRGPGDVANLGQLLGLSQAAAVAAVTANPASVLRRAEARRAGFRGV 202
            AC  +  DLI LD SQ+LP++++   V AA   G  FEVC +  V     RR+L+  +Q LL    GGR +V+S  A+ VL VRGP DV NL  L G+ Q  A  A+      V+R+AE+RR G++GV
Sbjct:   98 ACSTLECDLISLDFSQRLPFALKHKTVGAALLRGISFEVCYSAGVADVQARRNLISGVQMLLRATRGGRGIVISSEAKNVLGVRGPEDVINLAVLWGMGQEQARDAICGRMRVVVRQAESRRRGYKGV 225          
BLAST of mRNA_P-wetherbeei_contig5268.2.1 vs. uniprot
Match: A0A8C5RF93_LATLA (Ribonuclease P/MRP subunit p30 n=1 Tax=Laticauda laticaudata TaxID=8630 RepID=A0A8C5RF93_LATLA)

HSP 1 Score: 87.8 bits (216), Expect = 4.770e-16
Identity = 49/121 (40.50%), Postives = 76/121 (62.81%), Query Frame = 0
Query:   76 ACQAVWVDLIQLDLSQKLPYSVQKHHVDAAAATGKFFEVCVAEAVRSPFGRRHLLQNMQALLTFGGGRRLVLSGGAEAVLQVRGPGDVANLGQLLGLSQAAAVAAVTANPASVLRRAEARR 196
            AC  + VDL+ +++++KLP+ +++  V+AA   G +FE+    A++    RR+ + N   LL    G+ +VLS GAE  +Q+RGP DVAN+G L GLS +   AAV+ N  +VL   EAR+
Sbjct:  111 ACTTLDVDLVCVEVTEKLPFFIKRPSVNAAIERGVYFELLYVPAIKDSTMRRYTISNAYNLLQICRGKNIVLSSGAEKPIQLRGPYDVANIGWLFGLSGSNGKAAVSTNTRAVLLHGEARK 231          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5268.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWD2_ECTSI4.900e-2448.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZCV8_9STRA1.740e-2345.67RNase P subunit p30-domain-containing protein n=1 ... [more]
A0A250WQU3_9CHLO2.310e-1840.48Uncharacterized protein n=1 Tax=Chlamydomonas eust... [more]
A0A8J9ZMY5_BRALA3.520e-1842.50RPP30 protein n=2 Tax=Branchiostoma TaxID=7737 Rep... [more]
A0A6P4XU10_BRABE2.290e-1743.33ribonuclease P protein subunit p30-like n=1 Tax=Br... [more]
UPI0003F0B55A5.800e-1739.68ribonuclease P protein subunit p30-like n=1 Tax=Sa... [more]
UPI00074FF8301.330e-1640.32ribonuclease P protein subunit p30 n=1 Tax=Gekko j... [more]
UPI001C4BD0D51.970e-1642.11ribonuclease P protein subunit p30 isoform X2 n=1 ... [more]
U4LFV2_PYROM2.260e-1643.75Similar to Probable ribonuclease P protein subunit... [more]
A0A8C5RF93_LATLA4.770e-1640.50Ribonuclease P/MRP subunit p30 n=1 Tax=Laticauda l... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002738RNase P subunit p30PFAMPF01876RNase_P_p30coord: 74..184
e-value: 2.8E-24
score: 85.8
IPR002738RNase P subunit p30PANTHERPTHR13031RIBONUCLEASE P SUBUNIT P30coord: 74..203
NoneNo IPR availableGENE3D3.20.20.140coord: 67..191
e-value: 3.4E-21
score: 77.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 249..366
NoneNo IPR availablePANTHERPTHR13031:SF0RIBONUCLEASE P PROTEIN SUBUNIT P30coord: 74..203
IPR016195Polymerase/histidinol phosphatase-likeSUPERFAMILY89550PHP domain-likecoord: 73..189

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5268contigP-wetherbeei_contig5268:568..1668 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5268.2.1mRNA_P-wetherbeei_contig5268.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig5268 389..1925 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig5268.2.1 ID=prot_P-wetherbeei_contig5268.2.1|Name=mRNA_P-wetherbeei_contig5268.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=367bp
MGFKAHLGIGGKGGAFCSSTLAVYGFYNVSGSFLVALRSCRPLLNIIPQI
PFRGNHLDKQMVLFPFSNFSNNHRHACQAVWVDLIQLDLSQKLPYSVQKH
HVDAAAATGKFFEVCVAEAVRSPFGRRHLLQNMQALLTFGGGRRLVLSGG
AEAVLQVRGPGDVANLGQLLGLSQAAAVAAVTANPASVLRRAEARRAGFR
GVAVGKAMGGAGSTAAALAALRPPLPLPVSMSSGGAVAGATGTAGIGGGG
GGGGTGGGSGGDGGRGGTVTPKAGAALPTAKAIREPRGASACANGGGGGG
SGGGADGRGGGGSSEGGSGGGRRVSSLSAGAGAAAGPGEELEDEDDDNGG
GFLAMGSDHSDDAMDV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002738RNase_P_p30
IPR016195Pol/histidinol_Pase-like