mRNA_P-wetherbeei_contig1236.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1236.1.1
Unique NamemRNA_P-wetherbeei_contig1236.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig1236.1.1 vs. uniprot
Match: A0A836C8T2_9STRA (Lactoylglutathione lyase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8T2_9STRA)

HSP 1 Score: 205 bits (522), Expect = 4.910e-64
Identity = 93/137 (67.88%), Postives = 117/137 (85.40%), Query Frame = 1 
Query:    4 MMHVVYRVGDIDKSVKFYQDVLGMKLLRFRDVPDENYSNAFLGYGTESKGEHFSIELTYNYGVTSYNLGDGFRGMGLCLPDARAVSKAAAAAGATVLFGPKDVELGPCLVPDEPVGQKSVATVLRLTDPDGYEMEVT 414
            M+HVVYRVGD+DK++KFYQD  GM+LLR RD+P+  YSNAFLGYGTES+G++FSIELTYNYGVTSY +G+ F+GMGL LPD R+VSK    AG  V+ GP+DVE GPC++PDE VG+K++ATV+++TDPDGY  EVT
Sbjct:    1 MLHVVYRVGDMDKTIKFYQDAFGMQLLRQRDIPEGKYSNAFLGYGTESEGKYFSIELTYNYGVTSYKMGNAFQGMGLSLPDLRSVSKKVGGAGGAVVSGPEDVEYGPCIIPDEEVGKKTIATVMKVTDPDGYAFEVT 137
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BLAST of mRNA_P-wetherbeei_contig1236.1.1 vs. uniprot
Match: A0A6H5L115_9PHAE (Lactoylglutathione lyase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L115_9PHAE)

HSP 1 Score: 195 bits (496), Expect = 5.840e-59
Identity = 89/138 (64.49%), Postives = 112/138 (81.16%), Query Frame = 1 
Query:    1 KMMHVVYRVGDIDKSVKFYQDVLGMKLLRFRDVPDENYSNAFLGYGTESKGEHFSIELTYNYGVTSYNLGDGFRGMGLCLPDARAVSKAAAAAGATVLFGPKDVELGPCLVPDEPVGQKSVATVLRLTDPDGYEMEVT 414
            KM+HVVYRVG++D+++KFYQDV GM+LLR+RDV ++ YSNAFLGYGTESKGEHFSIELTYNYGV SYN+GDGF GMGL LPD   +   A A G  ++ GP++V+LGPC++PDEPVG+  +  V  + DPDGY  EV+
Sbjct:   92 KMLHVVYRVGNMDRAIKFYQDVFGMELLRYRDVAEDKYSNAFLGYGTESKGEHFSIELTYNYGVESYNIGDGFNGMGLRLPDLEGIVARAKAVGGEIVSGPEEVKLGPCIIPDEPVGKHVLEQVAVIKDPDGYTFEVS 229
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BLAST of mRNA_P-wetherbeei_contig1236.1.1 vs. uniprot
Match: A0A0G4G8C0_VITBC (Lactoylglutathione lyase n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4G8C0_VITBC)

HSP 1 Score: 160 bits (404), Expect = 3.820e-46
Identity = 75/138 (54.35%), Postives = 102/138 (73.91%), Query Frame = 1 
Query:    1 KMMHVVYRVGDIDKSVKFYQDVLGMKLLRFRDVPDENYSNAFLGYGTESKGEHFSIELTYNYGVTSYNLGD-GFRGMGLCLPDARAVSKAAAAAGATVLFGPKDVELGPCLVPDEPVGQKSVATVLRLTDPDGYEMEV 411
            KM+HVVYRVGD+DKS+ FY +VLGMK+LR RDVP+  Y+N FLGYG ESKGEHFS+ELTYNYGV  Y++G  GF G+G+CLP+ +AV  +       V+   +++E+ P ++PDEP  Q  + T+    DPDGY++E+
Sbjct:    5 KMLHVVYRVGDLDKSIDFYTNVLGMKVLRKRDVPEGKYTNVFLGYGPESKGEHFSVELTYNYGVDKYDIGKLGFLGLGVCLPELQAVESSVEGHHGRVIRNVEELEITPSMIPDEPAEQYRLWTMATAEDPDGYQIEL 142
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BLAST of mRNA_P-wetherbeei_contig1236.1.1 vs. uniprot
Match: A0A0A9MEP4_ARUDO (Lactoylglutathione lyase n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9MEP4_ARUDO)

HSP 1 Score: 127 bits (319), Expect = 5.800e-35
Identity = 67/137 (48.91%), Postives = 87/137 (63.50%), Query Frame = 1 
Query:    1 KMMHVVYRVGDIDKSVKFYQDVLGMKLLRFRDVPDENYSNAFLGYGTESKGEHFSIELTYNYGVTSYNLGDGFRGMGLCLPDARAVSKAAAAAGATVLFGPKDVELGPCLVPDEPVGQKSVATVLRLTDPDGYEMEV 411
            +++HVVYRVGD+DK++KFY + LGMKLLR RD+P+E Y+NAFLGYG E    HF +ELTYNYGV SY++G GF   G+ + D     +   A G TV  GP  V+           G KSV   +   DPDGY+ E+
Sbjct:   10 RLLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDS--HFVVELTYNYGVESYDIGTGFGHFGIAVEDVAKTVELIKAKGGTVTRGPGPVK-----------GGKSVIAFIE--DPDGYKFEL 131
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BLAST of mRNA_P-wetherbeei_contig1236.1.1 vs. uniprot
Match: A0A804Q124_MAIZE (Lactoylglutathione lyase n=2 Tax=Zea mays TaxID=4577 RepID=A0A804Q124_MAIZE)

HSP 1 Score: 126 bits (316), Expect = 2.430e-33
Identity = 67/137 (48.91%), Postives = 86/137 (62.77%), Query Frame = 1 
Query:    1 KMMHVVYRVGDIDKSVKFYQDVLGMKLLRFRDVPDENYSNAFLGYGTESKGEHFSIELTYNYGVTSYNLGDGFRGMGLCLPDARAVSKAAAAAGATVLFGPKDVELGPCLVPDEPVGQKSVATVLRLTDPDGYEMEV 411
            +++HVVYRVGD+DK++KFY + LGMKLLR RD+P+E Y+NAFLGYG E    HF +ELTYNYGV SYN+G GF   G+ + D     +   A G TV   P  V+           G KSV   +   DPDGY+ E+
Sbjct:   84 RLLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDS--HFVVELTYNYGVESYNIGTGFGHFGIAVEDVAKTVELIKAKGGTVTREPGPVK-----------GGKSVIAFIE--DPDGYKFEL 205
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BLAST of mRNA_P-wetherbeei_contig1236.1.1 vs. uniprot
Match: A0A8J5T621_ZIZPA (Uncharacterized protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5T621_ZIZPA)

HSP 1 Score: 125 bits (314), Expect = 8.800e-33
Identity = 67/137 (48.91%), Postives = 86/137 (62.77%), Query Frame = 1 
Query:    1 KMMHVVYRVGDIDKSVKFYQDVLGMKLLRFRDVPDENYSNAFLGYGTESKGEHFSIELTYNYGVTSYNLGDGFRGMGLCLPDARAVSKAAAAAGATVLFGPKDVELGPCLVPDEPVGQKSVATVLRLTDPDGYEMEV 411
            +M+HVVYRVGD+DK++KFY + LGMKLLR RD+P+E Y+NAFLGYG E  G HF +ELTYNYGV SY++G+ F   G+ + D         A G TV   P  V+           G KSV   +   DPDGY+ E+
Sbjct:   95 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEERYTNAFLGYGPE--GSHFVVELTYNYGVESYDIGNAFGHFGIAVEDVAKTVDLIKAKGGTVTREPGPVK-----------GGKSVIAFIE--DPDGYKFEL 216
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BLAST of mRNA_P-wetherbeei_contig1236.1.1 vs. uniprot
Match: A0A804Q189_MAIZE (Lactoylglutathione lyase n=3 Tax=Poaceae TaxID=4479 RepID=A0A804Q189_MAIZE)

HSP 1 Score: 126 bits (316), Expect = 1.500e-32
Identity = 67/137 (48.91%), Postives = 86/137 (62.77%), Query Frame = 1 
Query:    1 KMMHVVYRVGDIDKSVKFYQDVLGMKLLRFRDVPDENYSNAFLGYGTESKGEHFSIELTYNYGVTSYNLGDGFRGMGLCLPDARAVSKAAAAAGATVLFGPKDVELGPCLVPDEPVGQKSVATVLRLTDPDGYEMEV 411
            +++HVVYRVGD+DK++KFY + LGMKLLR RD+P+E Y+NAFLGYG E    HF +ELTYNYGV SYN+G GF   G+ + D     +   A G TV   P  V+           G KSV   +   DPDGY+ E+
Sbjct:   84 RLLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDS--HFVVELTYNYGVESYNIGTGFGHFGIAVEDVAKTVELIKAKGGTVTREPGPVK-----------GGKSVIAFIE--DPDGYKFEL 205
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BLAST of mRNA_P-wetherbeei_contig1236.1.1 vs. uniprot
Match: B4F836_MAIZE (Lactoylglutathione lyase n=2 Tax=Zea mays TaxID=4577 RepID=B4F836_MAIZE)

HSP 1 Score: 126 bits (316), Expect = 2.090e-32
Identity = 67/137 (48.91%), Postives = 86/137 (62.77%), Query Frame = 1 
Query:    1 KMMHVVYRVGDIDKSVKFYQDVLGMKLLRFRDVPDENYSNAFLGYGTESKGEHFSIELTYNYGVTSYNLGDGFRGMGLCLPDARAVSKAAAAAGATVLFGPKDVELGPCLVPDEPVGQKSVATVLRLTDPDGYEMEV 411
            +++HVVYRVGD+DK++KFY + LGMKLLR RD+P+E Y+NAFLGYG E    HF +ELTYNYGV SYN+G GF   G+ + D     +   A G TV   P  V+           G KSV   +   DPDGY+ E+
Sbjct:   84 RLLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDS--HFVVELTYNYGVESYNIGTGFGHFGIAVEDVAKTVELIKAKGGTVTREPGPVK-----------GGKSVIAFIE--DPDGYKFEL 205
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BLAST of mRNA_P-wetherbeei_contig1236.1.1 vs. uniprot
Match: A0A2P6THP5_CHLSO (Lactoylglutathione lyase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6THP5_CHLSO)

HSP 1 Score: 124 bits (311), Expect = 2.890e-32
Identity = 62/121 (51.24%), Postives = 81/121 (66.94%), Query Frame = 1 
Query:    1 KMMHVVYRVGDIDKSVKFYQDVLGMKLLRFRDVPDENYSNAFLGYGTESKGEHFSIELTYNYGVTSYNLGDGFRGMGLCLPDARAVSKAAAAAGATVLFGPKDVELGPCLVP--DEPVGQK 357
            +M+H VYRVGD+DK++K+YQD  GMKLLR+RD+P+  YSNAFLGYG E    HF++ELTYNYGV SY+LG+GF   G+  PD   +  A   AG  V      V+ G  ++   D+P G K
Sbjct:   15 RMLHAVYRVGDMDKTIKYYQDCFGMKLLRYRDIPEGKYSNAFLGYGPEET--HFAMELTYNYGVDSYDLGEGFGHFGIAAPDVYKLESAVKTAGGNVSRAAGPVKGGKTVIAFVDDPTGYK 133
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BLAST of mRNA_P-wetherbeei_contig1236.1.1 vs. uniprot
Match: A0A3L6EB13_MAIZE (Lactoylglutathione lyase n=4 Tax=Panicoideae TaxID=147369 RepID=A0A3L6EB13_MAIZE)

HSP 1 Score: 126 bits (316), Expect = 3.270e-32
Identity = 67/137 (48.91%), Postives = 86/137 (62.77%), Query Frame = 1 
Query:    1 KMMHVVYRVGDIDKSVKFYQDVLGMKLLRFRDVPDENYSNAFLGYGTESKGEHFSIELTYNYGVTSYNLGDGFRGMGLCLPDARAVSKAAAAAGATVLFGPKDVELGPCLVPDEPVGQKSVATVLRLTDPDGYEMEV 411
            +++HVVYRVGD+DK++KFY + LGMKLLR RD+P+E Y+NAFLGYG E    HF +ELTYNYGV SYN+G GF   G+ + D     +   A G TV   P  V+           G KSV   +   DPDGY+ E+
Sbjct:   84 RLLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDS--HFVVELTYNYGVESYNIGTGFGHFGIAVEDVAKTVELIKAKGGTVTREPGPVK-----------GGKSVIAFIE--DPDGYKFEL 205
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1236.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C8T2_9STRA4.910e-6467.88Lactoylglutathione lyase n=1 Tax=Tribonema minus T... [more]
A0A6H5L115_9PHAE5.840e-5964.49Lactoylglutathione lyase n=2 Tax=Ectocarpus TaxID=... [more]
A0A0G4G8C0_VITBC3.820e-4654.35Lactoylglutathione lyase n=1 Tax=Vitrella brassica... [more]
A0A0A9MEP4_ARUDO5.800e-3548.91Lactoylglutathione lyase n=1 Tax=Arundo donax TaxI... [more]
A0A804Q124_MAIZE2.430e-3348.91Lactoylglutathione lyase n=2 Tax=Zea mays TaxID=45... [more]
A0A8J5T621_ZIZPA8.800e-3348.91Uncharacterized protein n=1 Tax=Zizania palustris ... [more]
A0A804Q189_MAIZE1.500e-3248.91Lactoylglutathione lyase n=3 Tax=Poaceae TaxID=447... [more]
B4F836_MAIZE2.090e-3248.91Lactoylglutathione lyase n=2 Tax=Zea mays TaxID=45... [more]
A0A2P6THP5_CHLSO2.890e-3251.24Lactoylglutathione lyase n=1 Tax=Chlorella sorokin... [more]
A0A3L6EB13_MAIZE3.270e-3248.91Lactoylglutathione lyase n=4 Tax=Panicoideae TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1236contigP-wetherbeei_contig1236:144..1048 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FRI2
Preferred nameGLO1
PFAMsGlyoxalase
Model size414
Max annot lvl2759|Eukaryota
KEGG rclassRC00004,RC00360,RC00740
KEGG koko:K01759,ko:K05359
KEGG ReactionR00691,R01373,R02530
KEGG Pathwayko00400,ko00620,ko01100,ko01110,ko01130,ko01230,map00400,map00620,map01100,map01110,map01130,map01230
KEGG ModuleM00024
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004462,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005777,GO:0005829,GO:0005886,GO:0006081,GO:0006082,GO:0006089,GO:0006950,GO:0006970,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009266,GO:0009409,GO:0009438,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009579,GO:0009628,GO:0009651,GO:0009941,GO:0009987,GO:0010035,GO:0010038,GO:0010319,GO:0016020,GO:0016151,GO:0016829,GO:0016846,GO:0019243,GO:0019752,GO:0019863,GO:0019865,GO:0031967,GO:0031975,GO:0031977,GO:0032787,GO:0042180,GO:0042182,GO:0042221,GO:0042579,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0046185,GO:0046686,GO:0046872,GO:0046914,GO:0050896,GO:0051596,GO:0061727,GO:0071704,GO:0071944,GO:1901575,GO:1901615
Exons3
Evalue1.16e-57
EggNOG OGsCOG0346@1|root,KOG2943@2759|Eukaryota
EC4.2.1.51,4.2.1.91,4.4.1.5
Descriptionmethylglyoxal metabolic process
Cds size411
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185946.6190393-CDS-P-wetherbeei_contig1236:143..3061683185946.6190393-CDS-P-wetherbeei_contig1236:143..306Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1236 144..306 -
1683185946.6347997-CDS-P-wetherbeei_contig1236:657..8301683185946.6347997-CDS-P-wetherbeei_contig1236:657..830Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1236 658..830 -
1683185946.6450038-CDS-P-wetherbeei_contig1236:970..10451683185946.6450038-CDS-P-wetherbeei_contig1236:970..1045Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1236 971..1045 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185946.6526494-UTR-P-wetherbeei_contig1236:1045..10481683185946.6526494-UTR-P-wetherbeei_contig1236:1045..1048Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1236 1046..1048 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1236.1.1prot_P-wetherbeei_contig1236.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1236 144..1045 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1236.1.1

>prot_P-wetherbeei_contig1236.1.1 ID=prot_P-wetherbeei_contig1236.1.1|Name=mRNA_P-wetherbeei_contig1236.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=137bp
MMHVVYRVGDIDKSVKFYQDVLGMKLLRFRDVPDENYSNAFLGYGTESKG
EHFSIELTYNYGVTSYNLGDGFRGMGLCLPDARAVSKAAAAAGATVLFGP
KDVELGPCLVPDEPVGQKSVATVLRLTDPDGYEMEVT
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mRNA from alignment at P-wetherbeei_contig1236:144..1048-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1236.1.1 ID=mRNA_P-wetherbeei_contig1236.1.1|Name=mRNA_P-wetherbeei_contig1236.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=905bp|location=Sequence derived from alignment at P-wetherbeei_contig1236:144..1048- (Phaeothamnion wetherbeei SAG_119_79)
AAGATGATGCACGTCGTGTACCGCGTCGGGGACATCGACAAGTCCGTGAA
GTTTTATCAAGACGTCCTCGGAATGAAGGTGAGAGCGATATCGCTTGGAG
GCACACCTTGAGAAAATGTGATGTACTTCTGGTTTGCTTGCCCTTCGAAG
CGCGCAACACTGCCACATGACGCCGCACGTCCTTCCGCATGCTCTTTTAT
TTGCACGGCTGGCGGCAGCTGCTGCGATTTCGCGACGTGCCCGATGAGAA
TTACAGCAACGCCTTTCTCGGCTATGGCACGGAAAGCAAGGGGGAGCACT
TCAGCATCGAGCTCACGTACAACTACGGCGTGACGTCGTACAACCTGGGC
GACGGGTTCCGGGGCATGGGCCTCTGCCTGCCCGACGCCCGGTAAGGGGA
CATGGTGACTCATGGGCTTTGCACTTCCTCCAGACCTCATGCTGCATTTC
GTTCTTCGCTTGTTTTTGTGTTTGTGACCTGCTTGGCTTCTGGCGGCATG
AGATGAGTATGCCGCCGTGCGTCTTTTGTGATTATCGGTTGCGTTTGTGT
GCGCGAAAGGATGCAAGCGTACTGAGTAGCTGTTCGCACAACCCTACTCT
TCAGAGTTCCTGTATCTCTTCTTTCCGGTCGCGGTTTTGCCAACTACGAA
TGCGGCACGCCCGGCGTCTCCGGCGGCGGCGGCGGCAACAACGGCGGCGG
CGGCAACGATGCAACCGTTCGCCTGCTGCTGACGGGGGGCAGGGCGGTGT
CGAAGGCTGCGGCGGCGGCAGGGGCGACCGTGCTGTTTGGTCCGAAAGAC
GTGGAGCTGGGGCCGTGCCTCGTGCCGGACGAGCCGGTGGGGCAGAAGAG
CGTGGCGACAGTGCTCCGGCTGACGGACCCTGACGGGTACGAGATGGAGG
TCACC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1236:144..1048-

>mRNA_P-wetherbeei_contig1236.1.1 ID=mRNA_P-wetherbeei_contig1236.1.1|Name=mRNA_P-wetherbeei_contig1236.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=411bp|location=Sequence derived from alignment at P-wetherbeei_contig1236:144..1048- (Phaeothamnion wetherbeei SAG_119_79)
ATGATGCACGTCGTGTACCGCGTCGGGGACATCGACAAGTCCGTGAAGTT
TTATCAAGACGTCCTCGGAATGAAGCTGCTGCGATTTCGCGACGTGCCCG
ATGAGAATTACAGCAACGCCTTTCTCGGCTATGGCACGGAAAGCAAGGGG
GAGCACTTCAGCATCGAGCTCACGTACAACTACGGCGTGACGTCGTACAA
CCTGGGCGACGGGTTCCGGGGCATGGGCCTCTGCCTGCCCGACGCCCGGG
CGGTGTCGAAGGCTGCGGCGGCGGCAGGGGCGACCGTGCTGTTTGGTCCG
AAAGACGTGGAGCTGGGGCCGTGCCTCGTGCCGGACGAGCCGGTGGGGCA
GAAGAGCGTGGCGACAGTGCTCCGGCTGACGGACCCTGACGGGTACGAGA
TGGAGGTCACC
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