mRNA_P-wetherbeei_contig12359.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12359.2.1 vs. uniprot
Match: A0A3C1L6J6_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C1L6J6_9ACTN) HSP 1 Score: 108 bits (270), Expect = 2.500e-27 Identity = 73/152 (48.03%), Postives = 97/152 (63.82%), Query Frame = 1
Query: 28 PVDRPLIERLIDLALFLPAGVAAQIRDDLPGLVRKG----REQVQVARFFGEMAVTFGRNELIKRLEEA---QAAAAIVVADTIPEAAPLVIVA--MPPVP-FDGYDTLPAAHVVQRLRRLDADALAGVRDYETATRNRRTIIAKLDQLLGS 453
P RPL +++DL ++ P G+A ++ DLPG V G +++VQVAR+ GEMAVTFGR+E+ +RL A ++ IV AAPL +V+ P P F+GY+ L AA +VQ L RL L +RDYETA R RRTI+AKL QLLGS
Sbjct: 2 PDQRPLAAKVLDLVVYAPVGLAVRLSSDLPGRVAGGCARVQQRVQVARWVGEMAVTFGRSEVERRLTTAAEHRSLQPIV-------AAPLAMVSAHQPSAPPFEGYEHLAAAQIVQLLGRLPHAELVLIRDYETAHRRRRTILAKLTQLLGS 146
BLAST of mRNA_P-wetherbeei_contig12359.2.1 vs. uniprot
Match: A0A3C2B072_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2B072_9ACTN) HSP 1 Score: 96.7 bits (239), Expect = 9.900e-23 Identity = 58/140 (41.43%), Postives = 82/140 (58.57%), Query Frame = 1
Query: 46 IERLIDLALFLPAGVAAQIRDDLPGLVRKGREQVQ----VARFFGEMAVTFGRNELIKRLEEAQAAAAIVVADTIPEAAPLVIVAMPPVPFDGYDTLPAAHVVQRLRRLDADALAGVRDYETATRNRRTIIAKLDQLLGS 453
I RL++ ++ P G+A Q+RDD+P +V KGR +V+ VAR+ GEM V +G+ + +RL A P AAP+ P PF GY L AA +V L ++ L VRDYE ATR RRT++A++D LLG+
Sbjct: 6 ISRLLEALVYAPVGLAVQLRDDVPAMVAKGRAEVENRIRVARWVGEMTVQYGKQAIEQRLAPHSPQPVASEAPAAPPAAPV-----PAEPFHGYAALSAAEIVPMLAQVPHAELHLVRDYEAATRARRTVLARVDALLGA 140
BLAST of mRNA_P-wetherbeei_contig12359.2.1 vs. uniprot
Match: A0A6I3EXV3_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6I3EXV3_9ACTN) HSP 1 Score: 83.6 bits (205), Expect = 1.810e-17 Identity = 58/157 (36.94%), Postives = 86/157 (54.78%), Query Frame = 1
Query: 34 DRPLIERLIDLALFLPAGVAAQIRDDLP----GLVRKGREQVQVARFFGEMAVTFGRNELIKRLEEAQAAAAIV--------------VADTIPEAAPLVIVAMPPVPFDGYDTLPAAHVVQRLRRLDADALAGVRDYETATRNRRTIIAKLDQLLG 450
RP++E++++L + +PAG+ ++ DLP G+ + +V+VA + GEMAVT GR EL +R A A T+P A+ V+ PP F+GYD L AA +VQ L RL L + DYE A R+RRTI+ ++ QL+G
Sbjct: 4 QRPIVEKVLNLVVAVPAGLISRAATDLPTAVAGVRSRLENKVKVAHWIGEMAVTTGRQELERRFRPTPPQPATTNVAGQGHGVSGPSATAATLPSAS----VSRPP--FEGYDELAAAQIVQLLPRLPHADLRLIHDYEAAGRSRRTILHRIQQLVG 154
BLAST of mRNA_P-wetherbeei_contig12359.2.1 vs. uniprot
Match: A0A6I2XA88_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6I2XA88_9ACTN) HSP 1 Score: 69.7 bits (169), Expect = 5.310e-12 Identity = 51/159 (32.08%), Postives = 75/159 (47.17%), Query Frame = 1
Query: 46 IERLIDLALFLPAGVAAQIRDDLPGLVRKGREQVQVARFFGEMAVTFGRNELIKRLEEAQAAAAIVVADTIPEAAPLVIVAMPPV----------------------PFDGYDTLPAAHVVQRLRRLDADALAGVRDYETATRNRRTIIAKLDQLLGSG 456
IE L+DL ++ P G+ Q+ + LPGL+ +GR Q +AR GE AV G ++ + E AQ ++ + AA A PV P + Y+T AA +V L L D A + ++E ATR RRTI+ ++ QL G
Sbjct: 11 IESLLDLLVYAPLGLVTQLDELLPGLIERGRSQAVMARTIGEFAVRAGSEKVQGQAEGAQKQVESILRSLLDLAASRF--AAEPVEPADENVATTSSEQVHEESRVLPIEDYETRKAAEIVPMLSSLTPDQRAVIAEHEAATRKRRTILNRIQQLEADG 167
BLAST of mRNA_P-wetherbeei_contig12359.2.1 vs. uniprot
Match: A0A3C1CLM9_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C1CLM9_9ACTN) HSP 1 Score: 68.6 bits (166), Expect = 1.610e-11 Identity = 61/185 (32.97%), Postives = 80/185 (43.24%), Query Frame = 1
Query: 10 MPERTTPVDRPLIERLIDLALFLPAGVAAQIRDDLPGLVRKGRE----QVQVARFFGEMAVTFGRNELIKRLEEAQAAAAIVVADTIPEAAPLVIVAMPP------------------VPFD------------GYDTLPAAHVVQRLRRLDADALAGVRDYETATRNRRTIIAKLDQLLGSGAP 462
M + TP DR L+DL +F PAG+A ++ P LV KGR QV AR G+ AV GR ++ L + T P A + PP P D GYD+L A+ VVQRL L L +RD+E + R RRTI+ ++DQLL P
Sbjct: 1 MSDHKTPGDR-----LLDLLVFGPAGLAITAVEEFPKLVEKGRHRVEGQVHTARLVGQFAVQMGRRQIESTLGGLKPGG-----PTEPPGAATA--SAPPXXXXXXXXXXXRXXXXXXAPSDNGALTSRVLGIPGYDSLSASQVVQRLGGLSQGELEAIRDHELSHRRRRTILNRVDQLLAGAGP 173
BLAST of mRNA_P-wetherbeei_contig12359.2.1 vs. uniprot
Match: A0A7V9DJM9_9ACTN (Uncharacterized protein n=2 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V9DJM9_9ACTN) HSP 1 Score: 65.1 bits (157), Expect = 3.150e-10 Identity = 54/160 (33.75%), Postives = 79/160 (49.38%), Query Frame = 1
Query: 55 LIDLALFLPAGVAAQIRDDLPGLVRKGREQVQ----VARFFGEMAVTFGRNELIKRLEEAQA---------AAAIVVAD-----TIPEAAPLVIVAMPPV------------PFDGYDTLPAAHVVQRLRRLDADALAGVRDYETATRNRRTIIAKLDQL 444
L +LA+F+P G+ A++R+ +P L+ GRE+V+ VAR GEMAV G +L R +A +A ++V D T+ EA A V P Y++L A+ VV RL L+ L V +E R RRT++ K+DQL
Sbjct: 9 LAELAVFVPIGLVAELRETIPRLMESGRERVEGRIAVARVIGEMAVKAGAEQLRTRTVDAPPDPPSVPQGLSADVMVTDLEALSTVVEARATETAAGEQVDDSEESVDPEALPIADYESLAASQVVARLPALNTVELDQVAQFEQTNRRRRTVLGKIDQL 168
BLAST of mRNA_P-wetherbeei_contig12359.2.1 vs. uniprot
Match: A0A7Y1ZYB2_9ACTN (Uncharacterized protein n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A7Y1ZYB2_9ACTN) HSP 1 Score: 62.8 bits (151), Expect = 1.650e-9 Identity = 52/145 (35.86%), Postives = 71/145 (48.97%), Query Frame = 1
Query: 46 IERLIDLALFLPAGVAAQIRDDLPGLVRKGREQVQVARFFGEMAVTFGRNELIKRLEEAQAA-----AAIVVADTIPEAAPLVIVAMPP---VPFDGYDTLPAAHVVQRLRRLDADALAGVRDYETATRNRRTIIAKLDQLLGSG 456
++RLI A+ LP G+ A+ D+LP V + R G A+ EL + A A AA + T E P VA PP + YD LPAAH+V +L L A + YE+A RNRRT++ +LDQL +G
Sbjct: 9 LQRLIASAVVLPLGLGAKFVDELPTAVAAANSRADAIRAAGSAAIARAIAELQRLGGPAAPAPPPSGAAGLAPTTEIEVEP---VAHPPADALALPDYDQLPAAHIVGKLADLTAGERDDIEAYESAHRNRRTVLGRLDQLRVAG 150
BLAST of mRNA_P-wetherbeei_contig12359.2.1 vs. uniprot
Match: A0A7K1B8F0_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A7K1B8F0_9ACTN) HSP 1 Score: 52.4 bits (124), Expect = 2.500e-5 Identity = 26/48 (54.17%), Postives = 33/48 (68.75%), Query Frame = 1
Query: 301 PFDGYDTLPAAHVVQRLRRLDADALAGVRDYETATRNRRTIIAKLDQL 444
P Y++L A HVV RLR + D L VR +E A RNRRTI+AK++QL
Sbjct: 147 PIAEYESLAAIHVVDRLRTMQRDELELVRRFEVAHRNRRTILAKIEQL 194
BLAST of mRNA_P-wetherbeei_contig12359.2.1 vs. uniprot
Match: A0A7W1I9E7_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7W1I9E7_9ACTN) HSP 1 Score: 52.0 bits (123), Expect = 2.590e-5 Identity = 27/45 (60.00%), Postives = 32/45 (71.11%), Query Frame = 1
Query: 310 GYDTLPAAHVVQRLRRLDADALAGVRDYETATRNRRTIIAKLDQL 444
GYD+L A+ VVQRL L + L VRDYE ATR RRTI+ K+ QL
Sbjct: 123 GYDSLAASQVVQRLGGLSSAELEAVRDYEAATRARRTILNKVGQL 167 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12359.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12359.2.1 >prot_P-wetherbeei_contig12359.2.1 ID=prot_P-wetherbeei_contig12359.2.1|Name=mRNA_P-wetherbeei_contig12359.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=152bp MPERTTPVDRPLIERLIDLALFLPAGVAAQIRDDLPGLVRKGREQVQVARback to top mRNA from alignment at P-wetherbeei_contig12359:902..1366+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12359.2.1 ID=mRNA_P-wetherbeei_contig12359.2.1|Name=mRNA_P-wetherbeei_contig12359.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=465bp|location=Sequence derived from alignment at P-wetherbeei_contig12359:902..1366+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12359:902..1366+ >mRNA_P-wetherbeei_contig12359.2.1 ID=mRNA_P-wetherbeei_contig12359.2.1|Name=mRNA_P-wetherbeei_contig12359.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=456bp|location=Sequence derived from alignment at P-wetherbeei_contig12359:902..1366+ (Phaeothamnion wetherbeei SAG_119_79)back to top |