mRNA_P-wetherbeei_contig52618.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig52618.1.1
Unique NamemRNA_P-wetherbeei_contig52618.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig52618.1.1 vs. uniprot
Match: A0A847A3N3_9MICO (GNAT family N-acetyltransferase n=1 Tax=Leucobacter sp. TaxID=1898440 RepID=A0A847A3N3_9MICO)

HSP 1 Score: 112 bits (281), Expect = 3.200e-29
Identity = 62/107 (57.94%), Postives = 76/107 (71.03%), Query Frame = 1
Query:   25 IEIRLAAPTDYEAVDALIAEAYAYDYGPSTASSRDGSHLAANRARRFDVWVAVDRESGEIVGSVTTSSRGTQRLHEDARQDELDVRLLGVSPRARRQGIGSQLTEFV 345
            + IRLA P +Y+ VD LI ++Y++DYGP  AS  D    AA RA RFDVWVA D  +GE++GSVTTS RG   +HED    ELD+RLLGVSPRARRQGI + L + V
Sbjct:    4 LTIRLARPEEYDEVDRLILDSYSHDYGPRDASG-DPMRTAAARAERFDVWVARDA-AGELLGSVTTSRRGGPSMHEDVAAHELDLRLLGVSPRARRQGIAAALMQHV 108          
BLAST of mRNA_P-wetherbeei_contig52618.1.1 vs. uniprot
Match: A0A6G8FMV9_9MICO (N-acetyltransferase n=1 Tax=Leucobacter coleopterorum TaxID=2714933 RepID=A0A6G8FMV9_9MICO)

HSP 1 Score: 112 bits (279), Expect = 6.250e-29
Identity = 62/105 (59.05%), Postives = 77/105 (73.33%), Query Frame = 1
Query:   31 IRLAAPTDYEAVDALIAEAYAYDYGPSTASSRDGSHLAANRARRFDVWVAVDRESGEIVGSVTTSSRGTQRLHEDARQDELDVRLLGVSPRARRQGIGSQLTEFV 345
            IR A P +++A+DALI  AYA+DYGPST  S D  HLAA RA+RFDVWVA D  +G ++GSVTT   G   LHED R+ ELD+RLLGV+  ARR+G+ S+L  FV
Sbjct:    7 IRTAHPREFKAIDALIEAAYAHDYGPSTGDS-DLIHLAAARAKRFDVWVAHDA-AGLLLGSVTTRRAGGPPLHEDVREGELDLRLLGVALEARRRGVASELMRFV 109          
BLAST of mRNA_P-wetherbeei_contig52618.1.1 vs. uniprot
Match: A0A2S8ZA23_9MICO (GNAT family N-acetyltransferase n=1 Tax=Microbacterium sp. MYb66 TaxID=1848692 RepID=A0A2S8ZA23_9MICO)

HSP 1 Score: 111 bits (277), Expect = 1.510e-28
Identity = 60/112 (53.57%), Postives = 76/112 (67.86%), Query Frame = 1
Query:   25 IEIRLAAPTDYEAVDALIAEAYAYDYGPSTASSRDGSHLAANRARRFDVWVAVDRESGEIVGSVTTSSRGTQRLHEDARQDELDVRLLGVSPRARRQGIGSQLTEFVTALAR 360
            ++IRLAA  +YE +D  I  AY +DYGP      D   LA NRA+ +DVWVAVD E GEI+GSVTT+S G   L EDA  ++L  RLL V+P+ARR+G+G+ LT  V  LAR
Sbjct:    4 VQIRLAADDEYERIDEFIRSAYEHDYGPREHGD-DPMRLARNRAQAYDVWVAVDAEKGEILGSVTTASAGGSPLMEDAGPEDLTFRLLAVAPQARRRGLGAALTRHVIELAR 114          
BLAST of mRNA_P-wetherbeei_contig52618.1.1 vs. uniprot
Match: A0A1R4HXQ3_9MICO (Putative acetyltransferase n=1 Tax=Leucobacter sp. 7(1) TaxID=1255613 RepID=A0A1R4HXQ3_9MICO)

HSP 1 Score: 108 bits (271), Expect = 1.420e-27
Identity = 61/111 (54.95%), Postives = 72/111 (64.86%), Query Frame = 1
Query:   25 IEIRLAAPTDYEAVDALIAEAYAYDYGPSTASSRDGSHLAANRARRFDVWVAVDRESGEIVGSVTTSSRGTQRLHEDARQDELDVRLLGVSPRARRQGIGSQLTEFVTALA 357
            + +R A   D+ A+DALI  AYA+DYGP T  + D  H AA RAR  DVWVAVD  +G  VGSVTT   G   LHED   DELD+RLLGVSP ARR+G+ + L   V A A
Sbjct:   16 VRVRAAVSADFAAIDALIDSAYAHDYGPRTGGT-DPMHRAAERAREHDVWVAVDA-AGTYVGSVTTRRLGGPPLHEDVADDELDLRLLGVSPAARRRGVAASLMRDVAARA 124          
BLAST of mRNA_P-wetherbeei_contig52618.1.1 vs. uniprot
Match: UPI0019087B31 (GNAT family N-acetyltransferase n=1 Tax=Leucobacter sp. CSA2 TaxID=2796472 RepID=UPI0019087B31)

HSP 1 Score: 109 bits (273), Expect = 1.840e-27
Identity = 64/131 (48.85%), Postives = 80/131 (61.07%), Query Frame = 1
Query:    4 GESSSMSIEIRLAAPTDYEAVDALIAEAYAYDYGPSTASS------------RDGSHLAANRARRFDVWVAVDRESGEIVGSVTTSSRGTQRLHEDARQDELDVRLLGVSPRARRQGIGSQLTEFVTALAR 360
            G +++  + IR A P +Y A+D LI+EAY  DYGP   +             RD  H A+ RA RFD+WVAVD + G ++GSVTT   G   LHED R DELDVRLLGVSP ARR+GI + L + V   AR
Sbjct:   20 GAAAAAGVAIRTALPAEYPAIDRLISEAYEADYGPQEEAEFDCDAAAAGKADRDPVHEASARAARFDLWVAVDPD-GRVLGSVTTRRAGGPPLHEDVRDDELDVRLLGVSPAARRRGIAAALMQAVVDRAR 149          
BLAST of mRNA_P-wetherbeei_contig52618.1.1 vs. uniprot
Match: A0A7X6ZA36_9MICO (GNAT family N-acetyltransferase n=1 Tax=Microbacteriaceae bacterium TaxID=1873462 RepID=A0A7X6ZA36_9MICO)

HSP 1 Score: 107 bits (266), Expect = 6.540e-27
Identity = 62/114 (54.39%), Postives = 77/114 (67.54%), Query Frame = 1
Query:   13 SSMSIEIRLAAPTDYEAVDALIAEAYAYDYGPSTASSR--DGSHLAANRARRFDVWVAVDRESGEIVGSVTTSSRGTQRLHEDARQDELDVRLLGVSPRARRQGIGSQLTEFVT 348
            S++++ I LA   D+E VD +I EAYA+DYGPST  +   D    A+ RA +F+VWVA D E G IVGSVTT   G   LHEDA   ELD+RL+GVSP ARR+GI +QL   VT
Sbjct:    2 STVTVTIELACEADFEEVDRVIREAYAHDYGPSTQGTARPDPMLFASGRAEQFNVWVARD-EHGMIVGSVTTRRAGGPSLHEDALPHELDLRLVGVSPSARRRGIAAQLMRHVT 114          
BLAST of mRNA_P-wetherbeei_contig52618.1.1 vs. uniprot
Match: UPI00165CF52B (GNAT family N-acetyltransferase n=2 Tax=Mycetocola TaxID=76634 RepID=UPI00165CF52B)

HSP 1 Score: 104 bits (260), Expect = 5.530e-26
Identity = 59/110 (53.64%), Postives = 72/110 (65.45%), Query Frame = 1
Query:   31 IRLAAPTDYEAVDALIAEAYAYDYGPSTASSRDGSHLAANRARRFDVWVAVDRESGEIVGSVTTSSRGTQRLHEDARQDELDVRLLGVSPRARRQGIGSQLTEFVTALAR 360
            IRLA P ++EA+D LI  AY +DYG     + D    AA+RA R+DVWVA D  SG ++GSVTT   G   LHED R DELD+RLLGV+P ARR+GI + L   V   AR
Sbjct:    7 IRLARPEEFEAIDTLIRAAYTHDYGEK-GHATDPMQFAASRAERYDVWVAEDA-SGVLLGSVTTRRIGVPPLHEDVRADELDLRLLGVAPEARRRGIAAALMRHVMTSAR 114          
BLAST of mRNA_P-wetherbeei_contig52618.1.1 vs. uniprot
Match: UPI001C3A233F (GNAT family N-acetyltransferase n=1 Tax=Leucobacter soli TaxID=2812850 RepID=UPI001C3A233F)

HSP 1 Score: 104 bits (260), Expect = 6.450e-26
Identity = 61/114 (53.51%), Postives = 74/114 (64.91%), Query Frame = 1
Query:    4 GESSSMSIEIRLAAPTDYEAVDALIAEAYAYDYGPSTASSRDGSHLAANRARRFDVWVAVDRESGEIVGSVTTSSRGTQRLHEDARQDELDVRLLGVSPRARRQGIGSQLTEFV 345
            G +S   + + LA P ++EAVD LI  AY +DYGPS     D S  AA RA RFDVWVA  RE  E++GSVTT   G   LHE   + ELD+RLLGVSP ARR+GIG+ L + V
Sbjct:   16 GGASGAGVVVGLAGPDEFEAVDRLIDAAYRHDYGPS--EHEDPSRFAAVRAERFDVWVA--REGEELLGSVTTRRAGGPSLHERVPEGELDLRLLGVSPAARRRGIGALLMQHV 125          
BLAST of mRNA_P-wetherbeei_contig52618.1.1 vs. uniprot
Match: UPI00165D6AA2 (GNAT family N-acetyltransferase n=2 Tax=unclassified Leucobacter TaxID=2621730 RepID=UPI00165D6AA2)

HSP 1 Score: 102 bits (254), Expect = 3.500e-25
Identity = 56/108 (51.85%), Postives = 68/108 (62.96%), Query Frame = 1
Query:   25 IEIRLAAPTDYEAVDALIAEAYAYDYGPSTASSRDGS-HLAANRARRFDVWVAVDRESGEIVGSVTTSSRGTQRLHEDARQDELDVRLLGVSPRARRQGIGSQLTEFV 345
            I++RLA P D+ AVD L+  AYA+DYG     +   S H A NRA+ FDVW+A    S   VGS+TT       LHED R DELD+RLL VS   RRQG+G+QL  FV
Sbjct:    4 IQVRLAEPADFAAVDTLVDAAYAHDYGAQDEDADPNSMHFARNRAKEFDVWLAFLPGSEAPVGSITTRRLDGPSLHEDVRADELDLRLLAVSSAVRRQGVGAQLMRFV 111          
BLAST of mRNA_P-wetherbeei_contig52618.1.1 vs. uniprot
Match: A0A3L7AXC5_9MICO (GNAT family N-acetyltransferase n=1 Tax=Mycetocola lacteus TaxID=76637 RepID=A0A3L7AXC5_9MICO)

HSP 1 Score: 102 bits (254), Expect = 4.420e-25
Identity = 57/110 (51.82%), Postives = 72/110 (65.45%), Query Frame = 1
Query:   31 IRLAAPTDYEAVDALIAEAYAYDYGPSTASSRDGSHLAANRARRFDVWVAVDRESGEIVGSVTTSSRGTQRLHEDARQDELDVRLLGVSPRARRQGIGSQLTEFVTALAR 360
            IRLA P ++EA+D LI  AY +DYG     + D    A+ RA+ +DVWVA D  +G +VGSVTT   G   LHED R DELD+RLLGV+P ARR+GI + L + V   AR
Sbjct:    7 IRLARPDEFEAIDTLIRAAYTHDYGEK-GHATDAMQFASTRAQNYDVWVAEDA-TGALVGSVTTRRIGVPPLHEDVRADELDLRLLGVAPEARRRGIAAALMQHVINNAR 114          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52618.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A847A3N3_9MICO3.200e-2957.94GNAT family N-acetyltransferase n=1 Tax=Leucobacte... [more]
A0A6G8FMV9_9MICO6.250e-2959.05N-acetyltransferase n=1 Tax=Leucobacter coleoptero... [more]
A0A2S8ZA23_9MICO1.510e-2853.57GNAT family N-acetyltransferase n=1 Tax=Microbacte... [more]
A0A1R4HXQ3_9MICO1.420e-2754.95Putative acetyltransferase n=1 Tax=Leucobacter sp.... [more]
UPI0019087B311.840e-2748.85GNAT family N-acetyltransferase n=1 Tax=Leucobacte... [more]
A0A7X6ZA36_9MICO6.540e-2754.39GNAT family N-acetyltransferase n=1 Tax=Microbacte... [more]
UPI00165CF52B5.530e-2653.64GNAT family N-acetyltransferase n=2 Tax=Mycetocola... [more]
UPI001C3A233F6.450e-2653.51GNAT family N-acetyltransferase n=1 Tax=Leucobacte... [more]
UPI00165D6AA23.500e-2551.85GNAT family N-acetyltransferase n=2 Tax=unclassifi... [more]
A0A3L7AXC5_9MICO4.420e-2551.82GNAT family N-acetyltransferase n=1 Tax=Mycetocola... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig52618contigP-wetherbeei_contig52618:185..544 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog76636.JOEC01000002_gene2683
PFAMsAcetyltransf_1
Model size360
Max annot lvl201174|Actinobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.16e-25
EggNOG OGsCOG0454@1|root,COG0456@2|Bacteria,2IQC7@201174|Actinobacteria,4FQ7T@85023|Microbacteriaceae
DescriptionAcetyltransferase (GNAT) domain
Cds size342
COG categoryK
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186788.310267-UTR-P-wetherbeei_contig52618:184..2021683186788.310267-UTR-P-wetherbeei_contig52618:184..202Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig52618 185..202 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186788.3216617-CDS-P-wetherbeei_contig52618:202..5441683186788.3216617-CDS-P-wetherbeei_contig52618:202..544Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig52618 203..544 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig52618.1.1prot_P-wetherbeei_contig52618.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig52618 203..544 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig52618.1.1

>prot_P-wetherbeei_contig52618.1.1 ID=prot_P-wetherbeei_contig52618.1.1|Name=mRNA_P-wetherbeei_contig52618.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=114bp
MSIEIRLAAPTDYEAVDALIAEAYAYDYGPSTASSRDGSHLAANRARRFD
VWVAVDRESGEIVGSVTTSSRGTQRLHEDARQDELDVRLLGVSPRARRQG
IGSQLTEFVTALAR
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mRNA from alignment at P-wetherbeei_contig52618:185..544+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig52618.1.1 ID=mRNA_P-wetherbeei_contig52618.1.1|Name=mRNA_P-wetherbeei_contig52618.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=360bp|location=Sequence derived from alignment at P-wetherbeei_contig52618:185..544+ (Phaeothamnion wetherbeei SAG_119_79)
GCTGGAGAATCGTCATCCATGTCCATCGAGATCAGGCTTGCTGCGCCAAC CGACTATGAGGCCGTCGATGCATTGATCGCCGAGGCCTACGCCTACGACT ACGGCCCGTCCACCGCATCGAGCAGGGACGGGTCGCATCTCGCGGCCAAC CGCGCCAGGCGGTTCGATGTCTGGGTGGCGGTCGACCGGGAATCGGGCGA GATCGTGGGCTCGGTCACGACCTCCTCCAGGGGCACGCAGCGCCTCCATG AGGACGCCCGGCAGGATGAGCTGGATGTCCGCCTGCTCGGCGTCTCGCCC CGCGCGCGCCGGCAGGGGATCGGCTCACAGCTCACGGAGTTCGTGACCGC CCTCGCCAGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig52618:185..544+

>mRNA_P-wetherbeei_contig52618.1.1 ID=mRNA_P-wetherbeei_contig52618.1.1|Name=mRNA_P-wetherbeei_contig52618.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=342bp|location=Sequence derived from alignment at P-wetherbeei_contig52618:185..544+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTCCATCGAGATCAGGCTTGCTGCGCCAACCGACTATGAGGCCGTCGA
TGCATTGATCGCCGAGGCCTACGCCTACGACTACGGCCCGTCCACCGCAT
CGAGCAGGGACGGGTCGCATCTCGCGGCCAACCGCGCCAGGCGGTTCGAT
GTCTGGGTGGCGGTCGACCGGGAATCGGGCGAGATCGTGGGCTCGGTCAC
GACCTCCTCCAGGGGCACGCAGCGCCTCCATGAGGACGCCCGGCAGGATG
AGCTGGATGTCCGCCTGCTCGGCGTCTCGCCCCGCGCGCGCCGGCAGGGG
ATCGGCTCACAGCTCACGGAGTTCGTGACCGCCCTCGCCAGG
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