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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 1401 |
| Hectar predicted targeting category | signal peptide |
| Exons | 8 |
| Cds size | 708 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186787.6818895-UTR-P-wetherbeei_contig526:3449..3587 | 1683186787.6818895-UTR-P-wetherbeei_contig526:3449..3587 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig526 3450..3587 + |
| 1683186787.781951-UTR-P-wetherbeei_contig526:6182..6737 | 1683186787.781951-UTR-P-wetherbeei_contig526:6182..6737 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig526 6183..6737 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186787.6928532-CDS-P-wetherbeei_contig526:3587..3663 | 1683186787.6928532-CDS-P-wetherbeei_contig526:3587..3663 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig526 3588..3663 + |
| 1683186787.704757-CDS-P-wetherbeei_contig526:3882..3929 | 1683186787.704757-CDS-P-wetherbeei_contig526:3882..3929 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig526 3883..3929 + |
| 1683186787.716301-CDS-P-wetherbeei_contig526:4171..4197 | 1683186787.716301-CDS-P-wetherbeei_contig526:4171..4197 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig526 4172..4197 + |
| 1683186787.7274163-CDS-P-wetherbeei_contig526:4423..4442 | 1683186787.7274163-CDS-P-wetherbeei_contig526:4423..4442 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig526 4424..4442 + |
| 1683186787.7393348-CDS-P-wetherbeei_contig526:4730..4784 | 1683186787.7393348-CDS-P-wetherbeei_contig526:4730..4784 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig526 4731..4784 + |
| 1683186787.7535663-CDS-P-wetherbeei_contig526:5203..5311 | 1683186787.7535663-CDS-P-wetherbeei_contig526:5203..5311 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig526 5204..5311 + |
| 1683186787.7632828-CDS-P-wetherbeei_contig526:5535..5644 | 1683186787.7632828-CDS-P-wetherbeei_contig526:5535..5644 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig526 5536..5644 + |
| 1683186787.7724307-CDS-P-wetherbeei_contig526:5913..6182 | 1683186787.7724307-CDS-P-wetherbeei_contig526:5913..6182 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig526 5914..6182 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig526.2.1 >prot_P-wetherbeei_contig526.2.1 ID=prot_P-wetherbeei_contig526.2.1|Name=mRNA_P-wetherbeei_contig526.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=236bp
MWSVWATLSLLFVSGAAFKGAGTAGNDRFRGTNEDDTYYAKGGNDTLLGR
QGNDFLVGSAGSDGLEGFAGDDTLRGGAGADLLSGNNGNDLLTGDSGADH
MIGGKGDDEMHGGRGRDIFSDFGDPEDADIIFPGLGADLLNLSIGKGRTT
IVGFNASEDLIVVYATTAACLAGSLVGNGPVLSFLPSPVAVGGSGGPRSA
IAVLRPVMPGQPPVDVTVLQAAHPGAFRMQEPCQR* back to topmRNA from alignment at P-wetherbeei_contig526:3450..6737+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig526.2.1 ID=mRNA_P-wetherbeei_contig526.2.1|Name=mRNA_P-wetherbeei_contig526.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3288bp|location=Sequence derived from alignment at P-wetherbeei_contig526:3450..6737+ (Phaeothamnion wetherbeei SAG_119_79)
AGAGGGTAAAAGTCATAACAAACACAAACACAGTACCAAACATTGTAACA
CTGTAGCGAGAAAAGGAGTAGAAAGCTTCTTCGCAGCCGGGAAAGTAGGC
GGGGATCGAGATAACCCGCATTTCTTGGAAGCGCAGCGATGTGGAGCGTT
TGGGCGACTCTAAGCCTACTCTTCGTATCGGGCGCCGCTTTTAAAGGAGC
AGGCACCGCCGGAAGTAAGCTCGCGGAGTCAAGCTTTAGGACTTTTCTCT
TTCCTTTCCTTTCTTCGTTGTACGACGGAAGGCTAGTCAGTGAAACTCAA
GTTCAGTCAGCCACAAGGCGGGGCGCGACGGCTGATCTCTGTTGGGACCC
TGTCTGACTTTTCCTGGATTCTGATCCGCCTCATTCTCTTCCGTGCCAAA
CGTCTCGGTGGTGACGGCGATCGGCTGATGCAGATGATCGATTCCGGGGC
ACAAACGAAGACGACACGTACTATGCAAAAGTGCGTGGCTTGTATCCCCC
CCGGATCTAGACGGCGACTGGGCCCCGCGCATTTTAGCCGGAATGACGCT
TGGGAATGGCTTCATTGGCCGTTCACTGTGAGGCGGGCATGGGCTTGCGG
CCGCTACGTCCACACGCTTCTGCACATCCCTTGCCAGAGGCGCCCATGTC
TGTATGGGTACTTCTCAATACGTATTTTTCTTTTCGCTCCATTCGTTGTC
GTCGCCTTGTTCCCTTCCCCAGGGAGGCAACGATACTCTTTTGGGAAGGT
GAGCGCAGTGTAACCAACGCCTTCTCTTCCCGTCCACGTGGCTTTCCGGC
AGAGGAGCATCCTGCTTTGCGGCCCGTCAGCAGCAGTCTATCCTCAGCGC
GCTGCACTAGCTATTGTGGTGCGATTTGTACGCGCGATCCTAGCCTGCCT
GCCCGCTTACACGCCCAATGCATGGCGACTTGTCCCTTCTGTTCTTTCCC
CATCCGTTTCATCTCCCTTTGCAGACAAGGCAATGATTTTCTCGTGAGTA
AACGCGGTGGATTCTATGGCTTTTACCGAACCAATTTGACCCTAGACGCT
GTTTAACCAGAGCTCTAGTCTCGGCGGTCGTGAATAGCAGGCAGATGAAT
AACGCTGCTGATGCGCCCCGTAACGGTTTCTTTCTCGTTATAAGATACTA
GCCGCCGCAGGAGCTTGCCCCTGTGCGGCTTCCGAGCCTGTGCATTTGTT
CACCGAAAGGACAGCTCAATGTCTGACTCTCTCCCGCTTGTTACATCTTG
CTGTGGACGCTTGGTACGCGCTGTGCTGCAGGTTGGGAGCGCTGGATCTG
ACGGGTTGGAGGGATTTGCAGGCGACGATACGCTCGTGAGTTGGCACCTG
AATGGGCTTTTCAAAGGTCGTGGGGTCAGCGGGAAAGTGGGGGGGGGGGG
GCGCAGCGTGACAGGGAGACTGGCGCCGCTGACAAGTGAAGTGGCGTCGG
CGCCCGCAGATGCGCTGTATCTGTCGCCGCCCGGCTTGATTGCGCGCCGC
TCTAGCTGGCGTGCCGCCTTTCGTTTCTGTTTTCTTTCCCGGCCGTGGAC
CTCCTTCCATTCCTATTTTGCTTCTGCTTCCTGTTCAGCGTTGCTACTGC
AATCGGCACCGCTGCCGCCGCGGCTTCCCTCGATGCGATTGCAGAGCCTC
ACATGCATTCGTCGCTCCTTCCCTTTTTCTTCCTCTCCATTTCTCGTCCT
TTTTTCCCTACGCACCCGCGCTTCTCACAATTCTCCTCGGTTCCGCTGCC
ACAGCGAGGCGGCGCCGGGGCGGATCTCCTAAGCGGGAATAATGGAAACG
ATCTGCTCACTGGGGACAGCGGCGCGGATCACATGATCGGCGGAAAGGGG
GACGACGAAATGGTGAGGACTTCTCCCGTTGTGCTTTGTGCTTCTTCTAT
TTTCGTGTGATTACTTTTCCAGCGTGCATGCCCTCGTTTCACCTCCAACC
GCCGTTTAACTGCTTCTGAATCGTCGCTGCCACCTGTGTTACCCTACCGT
GCCGCAGCTGCCTCTAACGCCGCTGCCGCCGCCTCATACACCGTCGCCGC
TGCCTCTCCCTCCTGCCTATCACCTTTTTGTTTCAGCACGGCGGTAGAGG
ACGAGATATCTTCTCGGACTTTGGAGATCCCGAAGACGCAGACATTATCT
TTCCCGGACTCGGGGCCGATCTTCTAAATCTCTCCATTGGAAAAGGTTGG
TTTCGCCCCCTCATGGCTCCTCATGGCTATTGAAAGCTAGACTGTGCCAA
GTTGAAAGTTTGAGGCAATCTGGGAAGAAAGAGGTGCAAGCGCGTAATGT
CAGATTGCGTTGTCCCCGCCGGAGGACGGAAGCAACTGGACCTATTTAGG
CGCACTCACGCATCCAATGGCAGCTTAGGACGGCCGTGCACACGCATCAA
ACCGAATTTTTCCTCTCGCGCATTCCTTCCCCAACAAAAATATGTGCGCC
GATACGGCCTGCAGGGAGGACCACCATCGTCGGCTTTAACGCGTCGGAAG
ATTTGATTGTCGTATATGCCACCACGGCCGCATGCCTCGCCGGCAGTCTT
GTCGGCAACGGCCCCGTGCTCAGCTTCTTGCCCTCCCCTGTGGCGGTCGG
CGGCAGTGGCGGGCCGCGGAGCGCCATCGCGGTGCTGCGGCCGGTGATGC
CGGGGCAGCCGCCCGTCGATGTGACAGTGCTGCAGGCAGCGCACCCGGGC
GCCTTCCGGATGCAGGAGCCATGCCAGCGGTGACGAAAACAGCAAAAAGG
CACCGGCCGAACAGCGAGACGCATTGCTGCTGGCCTATTCCAGCGCCATG
ACCGGGCGGGCCCGGGGGGGGGGGCAGTGGCCGGAGCCCTCTGCCAATAG
GCTTGTTTGGCGCTAGGGTATTTGCTGCAGCGGTAAAAACGGCAACGGGC
GTGACGGCGGCAGTGGAAGCATCGCAGGGGCCGCGCGAACGAGGCGCGGA
GCACATGGAGCCGTTTGCAGCGCCTCTTTGTGCCACGTGAGCGTGGATAC
GTGCTGCTAATTTGCAACCTGATGTGTTTACATGGTAGGCCAAGCGTTGC
GGTCTGCCGCACCCGGAAACCAAACAAAGAATCCCACTGAGACGGTCAAC
TCTAAATCTATGTAGTCGATTCCTGGGGCAGATGTAAATGCGGCGCACTG
GCAGTCGCGGCAGCGGCTGCCATGGTAGCCGCGGCGCAATGGCGGCCGCG
GCAGCGGCAGTCGTGGCAGCGGCGGTGGCGGCAGCGACAGCGACGACGGC
AGCGGGAATTCTCATTGTGCTCATCAAGTACACATTGA back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig526:3450..6737+ >mRNA_P-wetherbeei_contig526.2.1 ID=mRNA_P-wetherbeei_contig526.2.1|Name=mRNA_P-wetherbeei_contig526.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=708bp|location=Sequence derived from alignment at P-wetherbeei_contig526:3450..6737+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTGGAGCGTTTGGGCGACTCTAAGCCTACTCTTCGTATCGGGCGCCGC
TTTTAAAGGAGCAGGCACCGCCGGAAATGATCGATTCCGGGGCACAAACG
AAGACGACACGTACTATGCAAAAGGAGGCAACGATACTCTTTTGGGAAGA
CAAGGCAATGATTTTCTCGTTGGGAGCGCTGGATCTGACGGGTTGGAGGG
ATTTGCAGGCGACGATACGCTCCGAGGCGGCGCCGGGGCGGATCTCCTAA
GCGGGAATAATGGAAACGATCTGCTCACTGGGGACAGCGGCGCGGATCAC
ATGATCGGCGGAAAGGGGGACGACGAAATGCACGGCGGTAGAGGACGAGA
TATCTTCTCGGACTTTGGAGATCCCGAAGACGCAGACATTATCTTTCCCG
GACTCGGGGCCGATCTTCTAAATCTCTCCATTGGAAAAGGGAGGACCACC
ATCGTCGGCTTTAACGCGTCGGAAGATTTGATTGTCGTATATGCCACCAC
GGCCGCATGCCTCGCCGGCAGTCTTGTCGGCAACGGCCCCGTGCTCAGCT
TCTTGCCCTCCCCTGTGGCGGTCGGCGGCAGTGGCGGGCCGCGGAGCGCC
ATCGCGGTGCTGCGGCCGGTGATGCCGGGGCAGCCGCCCGTCGATGTGAC
AGTGCTGCAGGCAGCGCACCCGGGCGCCTTCCGGATGCAGGAGCCATGCC
AGCGGTGA back to top
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