prot_P-wetherbeei_contig52598.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig52598.1.1
Unique Nameprot_P-wetherbeei_contig52598.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length43
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig52598.1.1 vs. uniprot
Match: A0A1M5M205_9BRAD (Uncharacterized protein n=1 Tax=Bradyrhizobium erythrophlei TaxID=1437360 RepID=A0A1M5M205_9BRAD)

HSP 1 Score: 55.8 bits (133), Expect = 5.340e-8
Identity = 26/37 (70.27%), Postives = 28/37 (75.68%), Query Frame = 0 
Query:    1 VVPAKAGTHNPGRLLLLKVFNNGASPMGRGVWVPALV 37
            VVPA AGTHNPG LL  KV ++ AS MGRGVWVPA  
Sbjct:   43 VVPANAGTHNPGSLLWQKVSHSSASSMGRGVWVPAFA 79
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52598.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A1M5M205_9BRAD5.340e-870.27Uncharacterized protein n=1 Tax=Bradyrhizobium ery... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig52598contigP-wetherbeei_contig52598:217..345 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig52598.1.1mRNA_P-wetherbeei_contig52598.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig52598 217..345 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig52598.1.1 ID=prot_P-wetherbeei_contig52598.1.1|Name=mRNA_P-wetherbeei_contig52598.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=43bp
VVPAKAGTHNPGRLLLLKVFNNGASPMGRGVWVPALVRRDDG*
back to top