mRNA_P-wetherbeei_contig52596.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig52596.1.1 vs. uniprot
Match: A0A6B7EUP7_9PHAE (Replicative DNA helicase n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EUP7_9PHAE) HSP 1 Score: 325 bits (833), Expect = 1.810e-106 Identity = 170/180 (94.44%), Postives = 176/180 (97.78%), Query Frame = 1
Query: 1 QGFQNSDLIIIAGRPSMGKTAFAFNLAKNIAQNHHTGVVFFSLEMTRQQLLYRLLASEVQITNTRLRASRIKETEWLKINSTVRDLSDLRLFIDDTPDLSVGEIKLKIKTIDLESPNPVNLIVIDYLQLLEGVDQNSNRVQELSKITRALKKLARDLNIPIIVLSQLSRNVESRVNKRPI 540
QGFQNSDLIIIAGRPSMGKTAFAFNLAKNIAQ+H+TGVVFFSLEMTRQQLLYRLLASEVQITNTRLRASRIKETEW+KINSTVRDLS+LRLFIDDTPDLSVGEIKLKIK+IDLES NP+NLIVIDYLQLLEG DQ SNR QELSKITRALKKLARDLNIPIIVLSQLSRNVESRVNKRPI
Sbjct: 200 QGFQNSDLIIIAGRPSMGKTAFAFNLAKNIAQHHNTGVVFFSLEMTRQQLLYRLLASEVQITNTRLRASRIKETEWIKINSTVRDLSNLRLFIDDTPDLSVGEIKLKIKSIDLESSNPINLIVIDYLQLLEGADQPSNRAQELSKITRALKKLARDLNIPIIVLSQLSRNVESRVNKRPI 379
BLAST of mRNA_P-wetherbeei_contig52596.1.1 vs. uniprot
Match: A0A1I9LVP9_9PHAE (Replicative DNA helicase n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVP9_9PHAE) HSP 1 Score: 317 bits (811), Expect = 3.120e-103 Identity = 165/180 (91.67%), Postives = 174/180 (96.67%), Query Frame = 1
Query: 1 QGFQNSDLIIIAGRPSMGKTAFAFNLAKNIAQNHHTGVVFFSLEMTRQQLLYRLLASEVQITNTRLRASRIKETEWLKINSTVRDLSDLRLFIDDTPDLSVGEIKLKIKTIDLESPNPVNLIVIDYLQLLEGVDQNSNRVQELSKITRALKKLARDLNIPIIVLSQLSRNVESRVNKRPI 540
QGFQNSDLIIIAGRPSMGKTAFAFNLAKN+AQ H+TGVVFFSLEMTRQQLLYRLLASEV+ITNTRLRASRIKETEWLKINST+ DLS L+LFIDDTPDLSVGEIKLKIKTIDLES ++LIVIDYLQLLEGVDQN+NRVQELSKITRALKKLARDLN+PIIVLSQLSRNVESRVNKRPI
Sbjct: 195 QGFQNSDLIIIAGRPSMGKTAFAFNLAKNVAQYHNTGVVFFSLEMTRQQLLYRLLASEVEITNTRLRASRIKETEWLKINSTIGDLSKLKLFIDDTPDLSVGEIKLKIKTIDLESSQQISLIVIDYLQLLEGVDQNANRVQELSKITRALKKLARDLNLPIIVLSQLSRNVESRVNKRPI 374
BLAST of mRNA_P-wetherbeei_contig52596.1.1 vs. uniprot
Match: A0A140G1D3_UNDPI (Replicative DNA helicase n=30 Tax=Laminariales TaxID=2886 RepID=A0A140G1D3_UNDPI) HSP 1 Score: 315 bits (808), Expect = 1.090e-102 Identity = 163/180 (90.56%), Postives = 174/180 (96.67%), Query Frame = 1
Query: 1 QGFQNSDLIIIAGRPSMGKTAFAFNLAKNIAQNHHTGVVFFSLEMTRQQLLYRLLASEVQITNTRLRASRIKETEWLKINSTVRDLSDLRLFIDDTPDLSVGEIKLKIKTIDLESPNPVNLIVIDYLQLLEGVDQNSNRVQELSKITRALKKLARDLNIPIIVLSQLSRNVESRVNKRPI 540
QGFQNSDLIIIAGRPSMGKTAFAFNLAKNIAQNH TGV+FFSLEMTRQQLLYRLLASEV ITNTRLRASRIKETEWLKIN+T++DLS LRLFIDDTPDLSVGEIKLK+KTI+LES N ++L+VIDYLQLLEGV+Q+ NRVQELSKITRALKKLARDLNIPIIVLSQLSRNVESRVNKRPI
Sbjct: 202 QGFQNSDLIIIAGRPSMGKTAFAFNLAKNIAQNHKTGVIFFSLEMTRQQLLYRLLASEVGITNTRLRASRIKETEWLKINNTIKDLSQLRLFIDDTPDLSVGEIKLKVKTINLESSNQISLVVIDYLQLLEGVNQDGNRVQELSKITRALKKLARDLNIPIIVLSQLSRNVESRVNKRPI 381
BLAST of mRNA_P-wetherbeei_contig52596.1.1 vs. uniprot
Match: A0A8F0JYE4_9PHAE (Replicative DNA helicase n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0JYE4_9PHAE) HSP 1 Score: 313 bits (801), Expect = 1.200e-101 Identity = 161/180 (89.44%), Postives = 173/180 (96.11%), Query Frame = 1
Query: 1 QGFQNSDLIIIAGRPSMGKTAFAFNLAKNIAQNHHTGVVFFSLEMTRQQLLYRLLASEVQITNTRLRASRIKETEWLKINSTVRDLSDLRLFIDDTPDLSVGEIKLKIKTIDLESPNPVNLIVIDYLQLLEGVDQNSNRVQELSKITRALKKLARDLNIPIIVLSQLSRNVESRVNKRPI 540
QGFQNSDLIIIAGRPSMGKTAFAFNLAKN+AQNH+ GVVFFSLEMTRQQLLYRLLASEV+ITNTRLRASR+KETEW+KIN+T+ DLS L+LFIDDTPDLSVGEIKLKIKTI+LE N ++LIVIDYLQLLEGV+QN NRVQELSKITRALKKLARDLNIPIIVLSQLSRNVESRVNKRPI
Sbjct: 200 QGFQNSDLIIIAGRPSMGKTAFAFNLAKNVAQNHNAGVVFFSLEMTRQQLLYRLLASEVEITNTRLRASRVKETEWIKINNTIHDLSKLQLFIDDTPDLSVGEIKLKIKTINLECSNQISLIVIDYLQLLEGVNQNENRVQELSKITRALKKLARDLNIPIIVLSQLSRNVESRVNKRPI 379
BLAST of mRNA_P-wetherbeei_contig52596.1.1 vs. uniprot
Match: A0A344PF29_9PHAE (Replicative DNA helicase n=4 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A344PF29_9PHAE) HSP 1 Score: 311 bits (797), Expect = 4.660e-101 Identity = 162/180 (90.00%), Postives = 172/180 (95.56%), Query Frame = 1
Query: 1 QGFQNSDLIIIAGRPSMGKTAFAFNLAKNIAQNHHTGVVFFSLEMTRQQLLYRLLASEVQITNTRLRASRIKETEWLKINSTVRDLSDLRLFIDDTPDLSVGEIKLKIKTIDLESPNPVNLIVIDYLQLLEGVDQNSNRVQELSKITRALKKLARDLNIPIIVLSQLSRNVESRVNKRPI 540
QGFQ SDLIIIAGRPSMGKTAFAFNLAKNIAQNH+TGVVFFSLEMTRQQLLYRLLASEV+ITNTRLRASRIKETEW KIN+T++DLS+L+LFIDDTPDLSVGEIKLKIKTIDLES V LIVIDYLQLLEG +QNSNRVQELSKITR LKKLARDLN+PIIVLSQLSRNVESRVNK+PI
Sbjct: 200 QGFQKSDLIIIAGRPSMGKTAFAFNLAKNIAQNHNTGVVFFSLEMTRQQLLYRLLASEVEITNTRLRASRIKETEWFKINATIQDLSNLKLFIDDTPDLSVGEIKLKIKTIDLESSKHVGLIVIDYLQLLEGAEQNSNRVQELSKITRDLKKLARDLNLPIIVLSQLSRNVESRVNKKPI 379
BLAST of mRNA_P-wetherbeei_contig52596.1.1 vs. uniprot
Match: D1J713_ECTSI (Replicative DNA helicase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D1J713_ECTSI) HSP 1 Score: 310 bits (794), Expect = 1.420e-100 Identity = 163/180 (90.56%), Postives = 173/180 (96.11%), Query Frame = 1
Query: 1 QGFQNSDLIIIAGRPSMGKTAFAFNLAKNIAQNHHTGVVFFSLEMTRQQLLYRLLASEVQITNTRLRASRIKETEWLKINSTVRDLSDLRLFIDDTPDLSVGEIKLKIKTIDLESPNPVNLIVIDYLQLLEGVDQNSNRVQELSKITRALKKLARDLNIPIIVLSQLSRNVESRVNKRPI 540
QGFQNSDLIIIAGRPSMGKTAFAFNLAKNIAQNH+TGVVFFSLEMTR+QLLYRLLASEV+ITNTRLRAS IKETEWLKIN+ V +LS L+LFIDDTP+LSVGEIKLKIKTIDLES V+LIVIDYLQLLEGVDQN+NRVQELSKITRALKKLARDLN+PIIVLSQLSRNVESRVNKRPI
Sbjct: 200 QGFQNSDLIIIAGRPSMGKTAFAFNLAKNIAQNHNTGVVFFSLEMTREQLLYRLLASEVEITNTRLRASSIKETEWLKINTKVSELSKLKLFIDDTPNLSVGEIKLKIKTIDLESSKYVSLIVIDYLQLLEGVDQNTNRVQELSKITRALKKLARDLNLPIIVLSQLSRNVESRVNKRPI 379
BLAST of mRNA_P-wetherbeei_contig52596.1.1 vs. uniprot
Match: A0A8F0F9P7_9PHAE (Replicative DNA helicase n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9P7_9PHAE) HSP 1 Score: 305 bits (781), Expect = 1.180e-98 Identity = 156/180 (86.67%), Postives = 173/180 (96.11%), Query Frame = 1
Query: 1 QGFQNSDLIIIAGRPSMGKTAFAFNLAKNIAQNHHTGVVFFSLEMTRQQLLYRLLASEVQITNTRLRASRIKETEWLKINSTVRDLSDLRLFIDDTPDLSVGEIKLKIKTIDLESPNPVNLIVIDYLQLLEGVDQNSNRVQELSKITRALKKLARDLNIPIIVLSQLSRNVESRVNKRPI 540
QGFQNSDLIIIAGRPSMGKTAFAFNLAKN+AQNH TGVVFFSLEMTRQQLLYRLLASEV+ITNTRLRASRIKETEW+KINST+R+LS ++LFIDDTPDLSVGEI+LKIKTI+LES ++L+VIDYLQLLEG +Q++NRVQELS +TRALKKLARDLNIPIIVLSQLSRNVESR+NKRPI
Sbjct: 200 QGFQNSDLIIIAGRPSMGKTAFAFNLAKNVAQNHDTGVVFFSLEMTRQQLLYRLLASEVEITNTRLRASRIKETEWIKINSTIRNLSKVKLFIDDTPDLSVGEIRLKIKTINLESSKRISLVVIDYLQLLEGTNQSTNRVQELSILTRALKKLARDLNIPIIVLSQLSRNVESRINKRPI 379
BLAST of mRNA_P-wetherbeei_contig52596.1.1 vs. uniprot
Match: A0A8F0FB27_9PHAE (Replicative DNA helicase n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FB27_9PHAE) HSP 1 Score: 303 bits (776), Expect = 6.610e-98 Identity = 155/180 (86.11%), Postives = 171/180 (95.00%), Query Frame = 1
Query: 1 QGFQNSDLIIIAGRPSMGKTAFAFNLAKNIAQNHHTGVVFFSLEMTRQQLLYRLLASEVQITNTRLRASRIKETEWLKINSTVRDLSDLRLFIDDTPDLSVGEIKLKIKTIDLESPNPVNLIVIDYLQLLEGVDQNSNRVQELSKITRALKKLARDLNIPIIVLSQLSRNVESRVNKRPI 540
QGFQNSDLIIIAGRPSMGKTAFAFNLAKNI QNH+TGVVFFSLEMTRQQLLYRLLASEV+ITNTRLR+SRIKETEWLKIN+T+ +LS L+LFIDDTP+LS+GEIKLKIKTI+LE + LI+IDYLQLLEG++QN+NRVQELSKITRALK LARDLNIPIIVLSQLSRNVESR+NKRPI
Sbjct: 200 QGFQNSDLIIIAGRPSMGKTAFAFNLAKNIVQNHNTGVVFFSLEMTRQQLLYRLLASEVEITNTRLRSSRIKETEWLKINNTIVNLSKLKLFIDDTPNLSIGEIKLKIKTINLEIDKQIGLIIIDYLQLLEGIEQNANRVQELSKITRALKNLARDLNIPIIVLSQLSRNVESRINKRPI 379
BLAST of mRNA_P-wetherbeei_contig52596.1.1 vs. uniprot
Match: D1GJP3_FUCVE (Replicative DNA helicase n=3 Tax=Fucaceae TaxID=3010 RepID=D1GJP3_FUCVE) HSP 1 Score: 289 bits (740), Expect = 1.690e-92 Identity = 151/180 (83.89%), Postives = 166/180 (92.22%), Query Frame = 1
Query: 1 QGFQNSDLIIIAGRPSMGKTAFAFNLAKNIAQNHHTGVVFFSLEMTRQQLLYRLLASEVQITNTRLRASRIKETEWLKINSTVRDLSDLRLFIDDTPDLSVGEIKLKIKTIDLESPNPVNLIVIDYLQLLEGVDQNSNRVQELSKITRALKKLARDLNIPIIVLSQLSRNVESRVNKRPI 540
QGFQNSDLIIIAGRPSMGKTAFAFNLAKNIAQ H+TGVVFFSLEMTRQQLLYRLLASEV+IT+TRLR SRIKE EW +I+ + LS+L+LFIDDTP+LSV +IKLKIK I+LES ++LIVIDYLQLLEG DQN+NRVQELSKITRALKKLARDLNIPIIVLSQLSRNVESR+NKRPI
Sbjct: 200 QGFQNSDLIIIAGRPSMGKTAFAFNLAKNIAQYHNTGVVFFSLEMTRQQLLYRLLASEVEITSTRLRTSRIKEKEWFQIHKIISKLSNLKLFIDDTPELSVNDIKLKIKGINLESTKKISLIVIDYLQLLEGKDQNTNRVQELSKITRALKKLARDLNIPIIVLSQLSRNVESRINKRPI 379
BLAST of mRNA_P-wetherbeei_contig52596.1.1 vs. uniprot
Match: A0A3S8PYC9_9PHAE (Replicative DNA helicase n=15 Tax=Sargassaceae TaxID=3014 RepID=A0A3S8PYC9_9PHAE) HSP 1 Score: 283 bits (725), Expect = 2.760e-90 Identity = 147/180 (81.67%), Postives = 164/180 (91.11%), Query Frame = 1
Query: 1 QGFQNSDLIIIAGRPSMGKTAFAFNLAKNIAQNHHTGVVFFSLEMTRQQLLYRLLASEVQITNTRLRASRIKETEWLKINSTVRDLSDLRLFIDDTPDLSVGEIKLKIKTIDLESPNPVNLIVIDYLQLLEGVDQNSNRVQELSKITRALKKLARDLNIPIIVLSQLSRNVESRVNKRPI 540
QGFQNSDLIIIAGRPSMGKTAFAFNLAKNIAQ H T VVFFSLEMT+QQLLYRLL+SEV+IT+TRLRASRIKETEW +I+ + LS LRLFIDDTP+LSV ++KLK+K+I+ ES ++L+VIDYLQLLE VDQN NRVQELSKITRALKKLARDLNIPIIVLSQLSRNVESRVNK+PI
Sbjct: 200 QGFQNSDLIIIAGRPSMGKTAFAFNLAKNIAQYHDTSVVFFSLEMTKQQLLYRLLSSEVKITSTRLRASRIKETEWFQIHRVINKLSSLRLFIDDTPELSVNDVKLKVKSINFESIKKISLVVIDYLQLLEEVDQNINRVQELSKITRALKKLARDLNIPIIVLSQLSRNVESRVNKKPI 379 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52596.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig52596.1.1 >prot_P-wetherbeei_contig52596.1.1 ID=prot_P-wetherbeei_contig52596.1.1|Name=mRNA_P-wetherbeei_contig52596.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=180bp QGFQNSDLIIIAGRPSMGKTAFAFNLAKNIAQNHHTGVVFFSLEMTRQQLback to top mRNA from alignment at P-wetherbeei_contig52596:3..542- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig52596.1.1 ID=mRNA_P-wetherbeei_contig52596.1.1|Name=mRNA_P-wetherbeei_contig52596.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=540bp|location=Sequence derived from alignment at P-wetherbeei_contig52596:3..542- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig52596:3..542- >mRNA_P-wetherbeei_contig52596.1.1 ID=mRNA_P-wetherbeei_contig52596.1.1|Name=mRNA_P-wetherbeei_contig52596.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=540bp|location=Sequence derived from alignment at P-wetherbeei_contig52596:3..542- (Phaeothamnion wetherbeei SAG_119_79)back to top |