mRNA_P-wetherbeei_contig5253.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5253.1.1 vs. uniprot
Match: D7G813_ECTSI (MATE efflux family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G813_ECTSI) HSP 1 Score: 276 bits (707), Expect = 4.260e-86 Identity = 157/270 (58.15%), Postives = 189/270 (70.00%), Query Frame = 1
Query: 1 AQAIAQWVGAFSYLWIMWLQRVPLGLQTASPADLVPTLEDLGDFAGAGSAMLFRQLCNVGAWTFMSSAATRMGVVTIAAHQVILSMWLVIAFAQDAFGVSGQVLVARYLGMAADN------SVKAAAD--ATPSALTARIVAKRVLSLSFLMGVALATAGLVVTPLLLPVVCKSAEVQTLVLQEFPMILRAFPICCLVWTWDSLFYGASDFVYQAKTIAFGSAVGVAGVLASIRLNWGLRGIWTSMIFYYFGLRMIAHFRRFNSAAGPFG 786
A A AQWVGA Y MW +R LGL A L P L ++ F GAG AM+FRQLCNVGAWT M+SAATRMG++ +AAHQ++LS+WLVIAF Q++ G SGQVLVA+YLG+A D+ +KAA D A S TAR +AKRVL+LS +G +LA +V P LL VVC+S EV LV Q FP IL AFP+CC+VWTWDSLFYGASDFVY AKT+A S GV G + S+R WG+ G+W SM + FG+RM AH RFNS GPFG
Sbjct: 298 ATAAAQWVGALVYTKYMWDRRERLGL--AGGVSL-PGLGEVKQFLGAGGAMVFRQLCNVGAWTVMASAATRMGILEVAAHQLMLSLWLVIAFVQESLGSSGQVLVAQYLGLARDSHKASGLDLKAAWDGAALESRETARSIAKRVLTLSLGLGFSLAACSRLVFPALLSVVCQSREVAALVSQVFPTILYAFPMCCVVWTWDSLFYGASDFVYNAKTVAVASLCGVVGSVLSLRRGWGVLGLWVSMTYVLFGVRMAAHLWRFNSRRGPFG 564
BLAST of mRNA_P-wetherbeei_contig5253.1.1 vs. uniprot
Match: A0A4D9CXB6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CXB6_9STRA) HSP 1 Score: 268 bits (684), Expect = 1.790e-83 Identity = 141/262 (53.82%), Postives = 182/262 (69.47%), Query Frame = 1
Query: 1 AQAIAQWVGAFSYLWIMWLQRVPLGLQTASPADLVPTLEDLGDFAGAGSAMLFRQLCNVGAWTFMSSAATRMGVVTIAAHQVILSMWLVIAFAQDAFGVSGQVLVARYLGMAADNSVKAAADATPSALTARIVAKRVLSLSFLMGVALATAGLVVTPLLLPVVCKSAEVQTLVLQEFPMILRAFPICCLVWTWDSLFYGASDFVYQAKTIAFGSAVGVAGVLASIRLNWGLRGIWTSMIFYYFGLRMIAHFRRFNSAAGPFG 786
A AIAQW+GA SY++ M ++ GL ++P + D+ +F AG+AMLFR LCNVGAWT M+S ATRMGVV IAAHQ+ILSMWLVIAF QDA G +GQVLV++ LG N + AR +AKRV+S S ++GVAL+ G +V P L+P+ C S EV L P++L FP+CC+VWTWDS++YGASDF Y AK IA S++ V+ LAS+ WGL G+W+SM+F YFGLR++AH+RRFNS GPFG
Sbjct: 236 ATAIAQWIGALSYIFKMTRRKEAFGLNLGWK--IIPGMADVQEFLTAGTAMLFRSLCNVGAWTLMASIATRMGVVEIAAHQLILSMWLVIAFVQDAVGAAGQVLVSQQLG----NPGSSRHAIRRGKARARAIAKRVISFSAIIGVALSLIGQIVLPSLIPLFCSSPEVIALTSSVLPIVLLGFPVCCVVWTWDSVYYGASDFKYNAKVIAVSSSIAVSLTLASLHYEWGLLGLWSSMVFVYFGLRVVAHYRRFNSEHGPFG 491
BLAST of mRNA_P-wetherbeei_contig5253.1.1 vs. uniprot
Match: W7U9X4_9STRA (Mate efflux family protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U9X4_9STRA) HSP 1 Score: 268 bits (684), Expect = 7.700e-82 Identity = 141/262 (53.82%), Postives = 182/262 (69.47%), Query Frame = 1
Query: 1 AQAIAQWVGAFSYLWIMWLQRVPLGLQTASPADLVPTLEDLGDFAGAGSAMLFRQLCNVGAWTFMSSAATRMGVVTIAAHQVILSMWLVIAFAQDAFGVSGQVLVARYLGMAADNSVKAAADATPSALTARIVAKRVLSLSFLMGVALATAGLVVTPLLLPVVCKSAEVQTLVLQEFPMILRAFPICCLVWTWDSLFYGASDFVYQAKTIAFGSAVGVAGVLASIRLNWGLRGIWTSMIFYYFGLRMIAHFRRFNSAAGPFG 786
A AIAQW+GA SY++ M ++ GL ++P + D+ +F AG+AMLFR LCNVGAWT M+S ATRMGVV IAAHQ+ILSMWLVIAF QDA G +GQVLV++ LG N + AR +AKRV+S S ++GVAL+ G +V P L+P+ C S EV L P++L FP+CC+VWTWDS++YGASDF Y AK IA S++ V+ LAS+ WGL G+W+SM+F YFGLR++AH+RRFNS GPFG
Sbjct: 395 ATAIAQWIGALSYIFKMTRRKEAFGLNLGWK--IIPGMADVQEFLTAGTAMLFRSLCNVGAWTLMASIATRMGVVEIAAHQLILSMWLVIAFVQDAVGAAGQVLVSQQLG----NPGSSRHAIRRGKARARAIAKRVISFSAIIGVALSLIGQIVLPSLIPLFCSSPEVIALTSSVLPIVLLGFPVCCVVWTWDSVYYGASDFKYNAKVIAVSSSIAVSLTLASLHYEWGLLGLWSSMVFVYFGLRVVAHYRRFNSEHGPFG 650
BLAST of mRNA_P-wetherbeei_contig5253.1.1 vs. uniprot
Match: A0A835Z143_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z143_9STRA) HSP 1 Score: 167 bits (422), Expect = 1.100e-48 Identity = 82/133 (61.65%), Postives = 100/133 (75.19%), Query Frame = 1
Query: 388 ARIVAKRVLSLSFLMGVALATAGLVVTPLLLPVVCKSAEVQTLVLQEFPMILRAFPICCLVWTWDSLFYGASDFVYQAKTIAFGSAVGVAGVLASIRLNWGLRGIWTSMIFYYFGLRMIAHFRRFNSAAGPFG 786
AR ++KRVL LS L+G+ LA A V+TP LP VCKS EV LV FPM L FPICC+VWTWDSLFYGASDF+Y A+TIA SA+G AG+LAS++ N+GL G+W SM + YF R+ AH+RRFN + GPFG
Sbjct: 2 ARAISKRVLQLSLLLGLGLAGASQVITPWALPFVCKSNEVVRLVQAVFPMALTGFPICCMVWTWDSLFYGASDFLYNARTIAVASAIGAAGILASLKWNFGLAGLWLSMTYLYFCPRLYAHYRRFNDSRGPFG 134
BLAST of mRNA_P-wetherbeei_contig5253.1.1 vs. uniprot
Match: A0A5J4Z3T9_PORPP (Protein DETOXIFICATION 44, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z3T9_PORPP) HSP 1 Score: 123 bits (308), Expect = 1.160e-28 Identity = 88/264 (33.33%), Postives = 135/264 (51.14%), Query Frame = 1
Query: 1 AQAIAQWVGAFSYLWIMWLQRVPLGLQTASPADLVPTLEDLGDFAGAGSAMLFRQLCNVGAWTFMSSAATRMGVVTIAAHQVILSMWLVIAFAQDAFGVSGQVLVARYLGMAADNSVKAAADATPSALTARIVAKRVLSLSFLMGVALATAGLVVTPLLLPVVCKSAEVQTLVLQEFPMILRAFPICCLVWTWDSLFYGASDFVYQAKTIAFGSA--VGVAGVLASIRLNWGLRGIWTSMIFYYFGLRMIAH-FRRFNSAAGPF 783
A +IAQ GA +Y+ + + GL A A ++ F + A+L RQ+ N+G WTFMSS TRMG++ IA+HQ++LS +L + F + V+GQ+L ++L V+ + AT A R+VA +S + A+A P L ++ A+VQ L M+L FP+ CLVW +DS Y ASDF + A ++ A +A +LA +W + YF +R++AH FR + S + PF
Sbjct: 228 ATSIAQICGAIAYVVDVLRRPDTFGLHAAQTAQAPIKRSEVMAFMQSSWALLVRQVSNLGVWTFMSSLITRMGLIEIASHQLVLSTFLFLTFLHEPLSVAGQILCTKHL-------VEDTSHATARAFIPRLVA-----ISLALSSAIAVVAQFAMPKWLQIMATDAQVQLKALSVMRMLLCVFPMFCLVWLYDSFSYAASDFSFNALSLLVAGACTAPIALMLARSSQYASAHAMWFVLFCPYFTIRLVAHVFRTYISRSSPF 479
BLAST of mRNA_P-wetherbeei_contig5253.1.1 vs. uniprot
Match: A0A7Y2HRG9_9BACT (MATE family efflux transporter n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7Y2HRG9_9BACT) HSP 1 Score: 111 bits (278), Expect = 9.600e-25 Identity = 84/242 (34.71%), Postives = 122/242 (50.41%), Query Frame = 1
Query: 1 AQAIAQWVGAFSYL-WIMWLQRVPLGLQTASP--ADLVPTLEDLGDFAGAGSAMLFRQLCNVGAWTFMSSAATRMGVVTIAAHQVILSMWLVIAFAQDAFGVSGQVLVARYLGMAADNSVKAAADATPSALTARIVAKRVLSLSFLMGVALATAGLVVTPLLLPVVCKSAEVQTLVLQEFPMILRAFPICCLVWTWDSLFYGASDFVYQAKTIAFGSAVGVAGVLASIRLNWGLRGIWTSMI 717
A IAQWVGA +L I+ +R LG++ P ADLVP G A+L R L +G T ++ ATRMGV+ +AAHQV + +WL++A DA V+GQ ++ G A AR +A+R+L + +G LA + V P L + E + V + P I+ P+ V+ WD +F GA F Y A + SAV A +L S+ L WGL G+W +++
Sbjct: 186 ATVIAQWVGALWFLRLILGTRREALGVRLHRPRLADLVP-------LGRVGGALLIRTLSLIGTMTLATATATRMGVLAVAAHQVAMQLWLLLALVVDALAVAGQAMI----GEAPREE-------------ARRIARRLLLWAAGVGAVLALSFAVGRPWLPRIFTDDPEAISRVDELLPFIIFMQPLNAFVFVWDGIFMGAGAFRYLAVQMVLSSAVAAALLLLSVPLGWGLPGVWWAIV 403
BLAST of mRNA_P-wetherbeei_contig5253.1.1 vs. uniprot
Match: A0A2P6THJ2_CHLSO (Protein DETOXIFICATION n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6THJ2_CHLSO) HSP 1 Score: 104 bits (259), Expect = 1.120e-21 Identity = 84/269 (31.23%), Postives = 128/269 (47.58%), Query Frame = 1
Query: 1 AQAIAQWVGAFSYLWIMWLQRVPLGLQTASPADLVPT-----LEDLGDFAGAGSAMLFRQLCNVGAWTFMSSAATRMGVVTIAAHQVILSMWLVIAFAQDAFGVSGQVLVARYLGMAADNSVKAAADATPSALTARIVAKRVLSLSFLMGVALATAGLVVTPLLLPVVCKSAEVQTLVLQEFPMILRAFPICCLVWTWDSLFYGASDFVYQAKTIAFGSAVGVAGVLASIRLNWGLRGIWTSMIFYYFGLRMIAHFR----RFNSAAGP 780
A A+WV A +YL +++ +R LG SP ++ T + ++ F AG AML R +G T S+ A R+GVV +AAHQV+ +WL+ + D+ ++GQ LVA LG AR V+ R+L + G ALA A + P++ + AEV V P+ + PI V+ +D + GA+DF + A + + VA +L L GL G+W +M GL M++ R+ S GP
Sbjct: 317 ATTTAEWVAALAYLGVLYGRRDALG--GLSPRLVLGTSMQAAVAEMTPFLKAGGAMLMRTGLLLGTKTLASATAARLGVVPVAAHQVVTQLWLLSSLVVDSVAIAGQSLVAVQLGRG-------------DVAEARAVSNRLLGIGLGAGAALAAAFWLAEPIIPGIFSSDAEVGAAVRAVLPIAVAMLPINAAVYVFDGIITGAADFKFMAGAMVVAAGTAVALLLGVEPLGLGLPGVWYAM-----GLLMLSRLATMMWRYQSEDGP 565
BLAST of mRNA_P-wetherbeei_contig5253.1.1 vs. uniprot
Match: A0A2P6VPW2_9CHLO (Protein DETOXIFICATION n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VPW2_9CHLO) HSP 1 Score: 102 bits (254), Expect = 5.770e-21 Identity = 86/271 (31.73%), Postives = 131/271 (48.34%), Query Frame = 1
Query: 1 AQAIAQWVGAFSYLWIMWLQRVPLGLQTASPA-----DLVPTLEDLGDFAGAGSAMLFRQLCNVGAWTFMSSAATRMGVVTIAAHQVILSMWLVIAFAQDAFGVSGQVLVARYLGMAADNSVKAAADATPSALTARIVAKRVLSLSFLMGVALATAGLVVTPLLLPVVCKSAEVQTLVLQEFPMILRAFPICCLVWTWDSLFYGASDFVYQA--KTIAFGSAVGVAGVLASIRLNWGLRGIWTSMIFYYFGLRMIAHFR----RFNSAAGP 780
A A+WV A +YL +W +R LG SP L +E++ F AG AML R +G T S+ A R+GVV +AAHQV+ +WL+ + D+ ++GQ LVA LG AR ++ R+L L G ALA A + P++ + +V+ V + P+ + P+ V+ +D + GASDF + A +A G+AVG+ +L L GL G+W +M G+ M++ R+ S GP
Sbjct: 331 ATTTAEWVAAVAYLACLWQRRDALG--GLSPRLVLGERLGAAVEEMVPFLKAGGAMLMRTGLLLGTKTLASATAARLGVVPMAAHQVVTQLWLLSSLIVDSVAIAGQSLVAVQLGKG-------------DVREARAISSRLLGLGIGGGAALAGAFWLAEPVIPTIFSSDPDVEAAVREVLPIAVAMLPVNAAVYVFDGIITGASDFRFMAGAMVVAAGTAVGL--LLGVEPLGLGLPGVWYAM-----GILMVSRLGTMLWRYQSEDGP 579
BLAST of mRNA_P-wetherbeei_contig5253.1.1 vs. uniprot
Match: A0A2T2UVM0_9BACT (MATE family efflux transporter n=1 Tax=Bacteroidetes bacterium SW_9_63_38 TaxID=1919118 RepID=A0A2T2UVM0_9BACT) HSP 1 Score: 99.0 bits (245), Expect = 4.120e-20 Identity = 77/237 (32.49%), Postives = 117/237 (49.37%), Query Frame = 1
Query: 1 AQAIAQWVGAFSYLWIMW-LQRVPLGLQTASPADLVPTLEDLGDFAGAGSAMLFRQLCNVGAWTFMSSAATRMGVVTIAAHQVILSMWLVIAFAQDAFGVSGQVLVARYLGMAADNSVKAAADATPSALTARIVAKRVLSLSFLMGVALATAGLVVTPLLLPVVCKSAEVQTLVLQEFPMILRAFPICCLVWTWDSLFYGASDFVYQAKTIAFGSAVGVAGVLASIR-LNWGLRGIW 705
A AIAQW+GA +LW++ +R LG++ P+ L L F G +L R VG T ++ A R+GV +AAHQV +WL +A DA V+ Q LV+++LG AD+ TAR V+ R+ L+GV L ++ P+L + +L + + P+ LV+ D ++ GA F Y AK + G+A+ A VL + + WGL G+W
Sbjct: 192 ATAIAQWLGALVFLWLLLGRRREALGIRLQWPS-----LRSLVPFLKVGCDLLLRTGSLVGTMTLATAVAARVGVTAVAAHQVAHQLWLFLALVVDALAVAAQALVSKHLG--ADDPE-----------TARAVSDRLFQWGLLVGVVLGVGFFLLRPVLPAFFTDDPDTIAALLDVYLFVALLQPLNGLVFVGDGIYMGAEAFPYLAKAM-IGTALTAAAVLGLVGPMGWGLPGVW 409
BLAST of mRNA_P-wetherbeei_contig5253.1.1 vs. uniprot
Match: A0A7X7GC47_9ACTN (MATE family efflux transporter n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X7GC47_9ACTN) HSP 1 Score: 92.4 bits (228), Expect = 8.530e-18 Identity = 67/231 (29.00%), Postives = 106/231 (45.89%), Query Frame = 1
Query: 13 AQWVGAFSYLWIMWLQRVPLGLQTASPADLVPTLEDLGDFAGAGSAMLFRQLCNVGAWTFMSSAATRMGVVTIAAHQVILSMWLVIAFAQDAFGVSGQVLVARYLGMAADNSVKAAADATPSALTARIVAKRVLSLSFLMGVALATAGLVVTPLLLPVVCKSAEVQTLVLQEFPMILRAFPICCLVWTWDSLFYGASDFVYQAKTIAFGSAVGVAGVLASIRLNWGLRGIW 705
AQ GA +LW + PL D P + + + R L G + ++AATRMG + +AAHQ+ L +W+ +A D+ ++GQ L+ RYLG A S +A R++ R+ S GV + A + LL + EV + FP ++ P+ V+ D + GASD Y A+ + + +G VLA++ WGL+G+W
Sbjct: 199 AQTAGAMLFLWRAAKRLRPL----TDTFDWRPHKGPMQELLVLSRDLAIRTLALYGVYFLSTTAATRMGTIQVAAHQIALDLWMFLAMIMDSLAIAGQALIGRYLG--AGKSAEA-----------RVIGTRIAWWSVAAGVVFSLAYHLAQDLLPRIFTTDPEVLATIATVFPFVILLQPLNGFVFGLDGVLIGASDTKYLAQAMMLSALIGAGIVLAALFFGWGLQGVW 412 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5253.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5253.1.1 >prot_P-wetherbeei_contig5253.1.1 ID=prot_P-wetherbeei_contig5253.1.1|Name=mRNA_P-wetherbeei_contig5253.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=262bp AQAIAQWVGAFSYLWIMWLQRVPLGLQTASPADLVPTLEDLGDFAGAGSAback to top mRNA from alignment at P-wetherbeei_contig5253:1715..3597- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5253.1.1 ID=mRNA_P-wetherbeei_contig5253.1.1|Name=mRNA_P-wetherbeei_contig5253.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1883bp|location=Sequence derived from alignment at P-wetherbeei_contig5253:1715..3597- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5253:1715..3597- >mRNA_P-wetherbeei_contig5253.1.1 ID=mRNA_P-wetherbeei_contig5253.1.1|Name=mRNA_P-wetherbeei_contig5253.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=786bp|location=Sequence derived from alignment at P-wetherbeei_contig5253:1715..3597- (Phaeothamnion wetherbeei SAG_119_79)back to top |