mRNA_P-wetherbeei_contig52524.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig52524.1.1 vs. uniprot
Match: A0A1F6PF01_9BACT (Uncharacterized protein n=2 Tax=Cyanobacteria/Melainabacteria group TaxID=1798711 RepID=A0A1F6PF01_9BACT) HSP 1 Score: 58.9 bits (141), Expect = 2.020e-8 Identity = 38/95 (40.00%), Postives = 52/95 (54.74%), Query Frame = 1
Query: 94 FMTMLLQQLTHQDPLQPMSGSDMTQQLLGIQQIQSLDTLQTQIAAMNQGNVVNASNVIGKTVSLSDPTGGTNTTTGQVSAIRQSSDGIQVVVNGN 378
F+ +L+ Q+ +QDPL P S Q QI L L +A+ NQ ++ AS++IGK VSL DP T G VS + +S G V+VNGN
Sbjct: 39 FLQLLMAQMKNQDPLNPTDSSQFMSQQAQFTQISELQKLNKSLASSNQ--IMQASSLIGKNVSLIDPNDAEKTILGTVSEAKINSTGASVIVNGN 131
BLAST of mRNA_P-wetherbeei_contig52524.1.1 vs. uniprot
Match: A0A0D8FUF1_9ACTN (Flagellar basal body rod modification protein n=1 Tax=Ferrimicrobium acidiphilum DSM 19497 TaxID=1121877 RepID=A0A0D8FUF1_9ACTN) HSP 1 Score: 56.2 bits (134), Expect = 2.240e-7 Identity = 33/97 (34.02%), Postives = 64/97 (65.98%), Query Frame = 1
Query: 91 QFMTMLLQQLTHQDPLQPMSGSDMTQQLLGIQQIQSLDTLQTQIAAM-NQGNVVNASNVIGKTVSLSDPTGGTNTTTGQVSAIRQSSDGIQVVVNGN 378
+F+ +L+ +LT+Q+PL PM+ S M QQ + +Q LD++ +++++ +Q VVNA+N+IG+TVS + +G + G VS + ++ + + +NG+
Sbjct: 37 EFLKLLVTELTNQNPLSPMNPSSMVQQTSSLSMVQLLDSVSNELSSIRSQAGVVNAANLIGQTVSYTTASGKQGS--GVVSGVAMANGSLNLNINGS 131
BLAST of mRNA_P-wetherbeei_contig52524.1.1 vs. uniprot
Match: A0A1F6RYL5_9BACT (Uncharacterized protein n=2 Tax=unclassified Candidatus Melainabacteria TaxID=1897007 RepID=A0A1F6RYL5_9BACT) HSP 1 Score: 55.5 bits (132), Expect = 3.800e-7 Identity = 32/98 (32.65%), Postives = 55/98 (56.12%), Query Frame = 1
Query: 82 EKQQFMTMLLQQLTHQDPLQPMSGSDMTQQLLGIQQIQSLDTLQTQIAAM-NQGNVVNASNVIGKTVSLSDPTGGTNTTTGQVSAIRQSSDGIQVVVN 372
++ F+ +L+ QL +QDPL PM ++ Q QI + L ++ + N ++ AS++IGK V+++DP NT TG V+ + S G +V+N
Sbjct: 32 DQDSFLQLLMMQLKYQDPLNPMGNTEFISQQAQFTQISEIQKLNKNMSNVANTNEIMQASSLIGKEVTITDPENSKNTITGAVTEAKISDKGTNIVIN 129
BLAST of mRNA_P-wetherbeei_contig52524.1.1 vs. uniprot
Match: K2ECF7_9BACT (Uncharacterized protein n=2 Tax=Bacteria TaxID=2 RepID=K2ECF7_9BACT) HSP 1 Score: 55.1 bits (131), Expect = 5.330e-7 Identity = 36/100 (36.00%), Postives = 55/100 (55.00%), Query Frame = 1
Query: 73 NATEKQQFMTMLLQQLTHQDPLQPMSGSDMTQQLLGIQQIQSLDTLQTQIAAMNQGNVVNASNVIGKTVSLSDPTGGTNTTTGQVSAIRQSSDGIQVVVN 372
N ++ F+ +L+ QL +QDPL+PM ++ Q QI L L + + NQ ++ AS +IGK V+L+DP +T TG VS R + +VVN
Sbjct: 29 NTIDQDGFLQLLMTQLKYQDPLKPMDNAEFVSQQAQFTQISELQKLNKTMMSNNQ--LMQASTLIGKEVTLTDPENPDSTVTGTVSEARITDKNTNIVVN 126
BLAST of mRNA_P-wetherbeei_contig52524.1.1 vs. uniprot
Match: A0A1F6PZW1_9BACT (Uncharacterized protein n=1 Tax=Candidatus Melainabacteria bacterium GWF2_37_15 TaxID=1801606 RepID=A0A1F6PZW1_9BACT) HSP 1 Score: 53.9 bits (128), Expect = 1.270e-6 Identity = 38/94 (40.43%), Postives = 49/94 (52.13%), Query Frame = 1
Query: 94 FMTMLLQQLTHQDPLQPMSGSDMTQQLLGIQQIQSLDTLQTQIAAMNQGNVVNASNVIGKTVSLSDPTGGTNTTTGQVSAIRQSSDGIQVVVNG 375
F+ +L+ QL HQDPL PMS + Q QI L L Q V AS+++GKTVS +P T T GQV+ + + G VVVNG
Sbjct: 25 FLQLLMTQLKHQDPLNPMSNQEFLSQQAQFTQISELQKLNKSFNG--QTLFVQASSLVGKTVSFLNPDNLTETLEGQVTEAKFNDKGTAVVVNG 116
BLAST of mRNA_P-wetherbeei_contig52524.1.1 vs. uniprot
Match: A0A847H7G9_9BACT (Uncharacterized protein n=1 Tax=Candidatus Gastranaerophilales bacterium TaxID=2137880 RepID=A0A847H7G9_9BACT) HSP 1 Score: 50.4 bits (119), Expect = 3.540e-5 Identity = 36/93 (38.71%), Postives = 52/93 (55.91%), Query Frame = 1
Query: 94 FMTMLLQQLTHQDPLQPMSGSDMTQQLLGIQQIQSLDTLQTQIAAMNQGNVVNASNVIGKTVSLSDPTGGTNTTTGQVSAIRQSSDGIQVVVN 372
F+ +L+ Q+ Q+PL+PMS DM Q + L L IA+ NQ V AS++IGKTVSL +P G+V+ + S GI VV++
Sbjct: 37 FLHLLMTQMQCQNPLEPMSNQDMIAQQAQFTTVSELQKLNASIASGNQ--FVQASSLIGKTVSLINPDNPEELIEGRVTEAKAGSYGIGVVID 127
BLAST of mRNA_P-wetherbeei_contig52524.1.1 vs. uniprot
Match: A0A2Z2KVL7_9BACL (Flagellar hook assembly protein FlgD n=1 Tax=Paenibacillus donghaensis TaxID=414771 RepID=A0A2Z2KVL7_9BACL) HSP 1 Score: 50.4 bits (119), Expect = 4.040e-5 Identity = 27/69 (39.13%), Postives = 43/69 (62.32%), Query Frame = 1
Query: 85 KQQFMTMLLQQLTHQDPLQPMSGSDMTQQLLGIQQIQSLDTLQTQIAAMNQGNVVNASNVIGKTVSLSD 291
K QF+ +L+ QL HQDP+QPM + Q+ ++ L + TQ+ AMNQ ++ N S +IGK ++ +D
Sbjct: 30 KDQFLKILITQLQHQDPMQPMEDKEFIAQMAQFTSLEQLMNISTQLTAMNQ-SLGNVSGLIGKEITWND 97
BLAST of mRNA_P-wetherbeei_contig52524.1.1 vs. uniprot
Match: A0A846QUY7_9DELT (Basal-body rod modification protein FlgD n=1 Tax=Desulfobaculum xiamenense TaxID=995050 RepID=A0A846QUY7_9DELT) HSP 1 Score: 51.2 bits (121), Expect = 4.500e-5 Identity = 28/70 (40.00%), Postives = 42/70 (60.00%), Query Frame = 1
Query: 82 EKQQFMTMLLQQLTHQDPLQPMSGSDMTQQLLGIQQIQSLDTLQTQIAAMNQGNV----VNASNVIGKTV 279
+K+ F+T+L+ QL HQDPL PM + T QL ++ L + +A+++Q + VNASN IGK V
Sbjct: 30 DKEDFLTLLVAQLQHQDPLNPMDDKEFTSQLAEFSNLEQLTAINKGVASLSQQTIHQEMVNASNFIGKEV 99
BLAST of mRNA_P-wetherbeei_contig52524.1.1 vs. uniprot
Match: UPI0006CFD0BB (flagellar hook capping protein n=1 Tax=Desulfovibrio brasiliensis TaxID=221711 RepID=UPI0006CFD0BB) HSP 1 Score: 51.2 bits (121), Expect = 4.580e-5 Identity = 30/73 (41.10%), Postives = 43/73 (58.90%), Query Frame = 1
Query: 82 EKQQFMTMLLQQLTHQDPLQPMSGSDMTQQLLGIQQIQSLDT----LQTQIAAMNQGNVVNASNVIGKTVSLS 288
++Q F+T+L+ QLTHQDP+ PM ++MT QL Q++ L L T +AA Q + +A IGK V S
Sbjct: 30 DQQDFLTILVAQLTHQDPMNPMEDTEMTGQLAEFSQLEQLTNINSGLDTMLAAQTQNEMYDAVGFIGKDVKAS 102
BLAST of mRNA_P-wetherbeei_contig52524.1.1 vs. uniprot
Match: UPI001AE26E85 (flagellar hook capping protein n=1 Tax=Paenibacillus shirakamiensis TaxID=1265935 RepID=UPI001AE26E85) HSP 1 Score: 49.7 bits (117), Expect = 8.940e-5 Identity = 34/99 (34.34%), Postives = 56/99 (56.57%), Query Frame = 1
Query: 67 DANATEKQQFMTMLLQQLTHQDPLQPMSGSDMTQQLLGIQQIQSLDTLQTQIAAMNQGNVVNASNVIGKTVSLSDPTGGT--NTTTGQVSAIRQSSDGI 357
D + K QF+ +L+ QL++QDP QP+ + Q+ ++ L + TQ+ MNQ N+ N S +IGK ++ S+ T G +++TGQ S +GI
Sbjct: 26 DNQSMGKDQFLKILITQLSNQDPTQPLQDKEFIAQMAQFTSVEQLMNISTQLTNMNQ-NLGNLSGLIGKQITWSETTKGVEYDSSTGQAVTNTSSLNGI 123 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52524.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig52524.1.1 >prot_P-wetherbeei_contig52524.1.1 ID=prot_P-wetherbeei_contig52524.1.1|Name=mRNA_P-wetherbeei_contig52524.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=126bp VNTVSSNPQTAGTGTTTTSTTSDANATEKQQFMTMLLQQLTHQDPLQPMSback to top mRNA from alignment at P-wetherbeei_contig52524:2..379- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig52524.1.1 ID=mRNA_P-wetherbeei_contig52524.1.1|Name=mRNA_P-wetherbeei_contig52524.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=378bp|location=Sequence derived from alignment at P-wetherbeei_contig52524:2..379- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig52524:2..379- >mRNA_P-wetherbeei_contig52524.1.1 ID=mRNA_P-wetherbeei_contig52524.1.1|Name=mRNA_P-wetherbeei_contig52524.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=378bp|location=Sequence derived from alignment at P-wetherbeei_contig52524:2..379- (Phaeothamnion wetherbeei SAG_119_79)back to top |