mRNA_P-wetherbeei_contig52523.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig52523.1.1
Unique NamemRNA_P-wetherbeei_contig52523.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig52523.1.1 vs. uniprot
Match: A0A7K1B9T3_9ACTN (MBL fold metallo-hydrolase n=2 Tax=root TaxID=1 RepID=A0A7K1B9T3_9ACTN)

HSP 1 Score: 159 bits (402), Expect = 1.830e-44
Identity = 81/115 (70.43%), Postives = 91/115 (79.13%), Query Frame = 1
Query:    1 MFFRQYYLDCLSHASYLVGDTGTGCAVVVDPQRDVDQYLVDARENGVTITKVIETHFHADFVSGHLELAARTGASIAYGRAAAGKAEFPVELLGSGDLITLGGDHGVVLEVRETP 345
            MF RQYYL CLSHASYLVGDT TG A V+DPQRDVD+YL DA  NG+TIT VIETHFHADF+SGHLELA RTGA+I +G AA    EFP+E  G+GD+I LG    VVLE+ ETP
Sbjct:    2 MFLRQYYLGCLSHASYLVGDTSTGRAAVIDPQRDVDEYLADAAANGLTITHVIETHFHADFLSGHLELAQRTGAAIVFGTAALPTVEFPIEAHGNGDMIVLGD---VVLEILETP 113          
BLAST of mRNA_P-wetherbeei_contig52523.1.1 vs. uniprot
Match: A0A7K0Y5S9_9ACTN (MBL fold metallo-hydrolase (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7K0Y5S9_9ACTN)

HSP 1 Score: 157 bits (396), Expect = 7.850e-44
Identity = 81/115 (70.43%), Postives = 92/115 (80.00%), Query Frame = 1
Query:    1 MFFRQYYLDCLSHASYLVGDTGTGCAVVVDPQRDVDQYLVDARENGVTITKVIETHFHADFVSGHLELAARTGASIAYGRAAAGKAEFPVELLGSGDLITLGGDHGVVLEVRETP 345
            MFF+QYYL+CLSHASY+VGDT TG A VVDPQRD+ QYL DARENG+TITKVIETHFHADF+SGHLELA  TGA+I YGRAA G+ EF  E +  G  I+LG    V LE+ ETP
Sbjct:   21 MFFQQYYLECLSHASYMVGDTSTGRAAVVDPQRDIQQYLDDARENGLTITKVIETHFHADFLSGHLELAEATGAAIVYGRAAEGRVEFLAEYVDHGSHISLGT---VDLEILETP 132          
BLAST of mRNA_P-wetherbeei_contig52523.1.1 vs. uniprot
Match: A0A3C2AZZ5_9ACTN (MBL fold metallo-hydrolase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2AZZ5_9ACTN)

HSP 1 Score: 156 bits (395), Expect = 1.700e-43
Identity = 81/115 (70.43%), Postives = 92/115 (80.00%), Query Frame = 1
Query:    1 MFFRQYYLDCLSHASYLVGDTGTGCAVVVDPQRDVDQYLVDARENGVTITKVIETHFHADFVSGHLELAARTGASIAYGRAAAGKAEFPVELLGSGDLITLGGDHGVVLEVRETP 345
            MFFRQYYL CLSHASYLVGD+ TG AVVVDPQRDV QYL DA  +G+TIT V+ETHFHADF+SGHLELA RTGA I +GRAA  K +FP++    GDLI LG    VVL++RETP
Sbjct:    1 MFFRQYYLGCLSHASYLVGDSVTGKAVVVDPQRDVAQYLADAEAHGLTITHVLETHFHADFLSGHLELAERTGAVIGFGRAAEDKVQFPIQPYDDGDLIRLGE---VVLQIRETP 112          
BLAST of mRNA_P-wetherbeei_contig52523.1.1 vs. uniprot
Match: A0A7X9KHK7_9ACTN (MBL fold metallo-hydrolase n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A7X9KHK7_9ACTN)

HSP 1 Score: 155 bits (393), Expect = 3.510e-43
Identity = 80/115 (69.57%), Postives = 91/115 (79.13%), Query Frame = 1
Query:    1 MFFRQYYLDCLSHASYLVGDTGTGCAVVVDPQRDVDQYLVDARENGVTITKVIETHFHADFVSGHLELAARTGASIAYGRAAAGKAEFPVELLGSGDLITLGGDHGVVLEVRETP 345
            MFFRQYYL CLSHASYL+GDT TG AVVVDPQRDV +YL DA  +G+TIT V+ETHFHADF+SGHLELAA TGA+I YG AA G+AEFP+     G +I LG    V L+VRETP
Sbjct:    1 MFFRQYYLGCLSHASYLIGDTTTGRAVVVDPQRDVAEYLADAEAHGLTITHVLETHFHADFLSGHLELAAHTGATIGYGSAAEGRAEFPITTYAHGAVIDLGE---VALQVRETP 112          
BLAST of mRNA_P-wetherbeei_contig52523.1.1 vs. uniprot
Match: A0A3N5KNM0_9ACTN (MBL fold metallo-hydrolase (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A3N5KNM0_9ACTN)

HSP 1 Score: 144 bits (362), Expect = 6.590e-42
Identity = 73/115 (63.48%), Postives = 88/115 (76.52%), Query Frame = 1
Query:    1 MFFRQYYLDCLSHASYLVGDTGTGCAVVVDPQRDVDQYLVDARENGVTITKVIETHFHADFVSGHLELAARTGASIAYGRAAAGKAEFPVELLGSGDLITLGGDHGVVLEVRETP 345
            MFFRQYYL CLSHASYL+GDT TG AVVVDPQRDV+QY+ DA E+G+ I +VIETHFHADF+SGHLELA + GA I++G A  GK +F  + L  G +++LG    V LEV  TP
Sbjct:    1 MFFRQYYLGCLSHASYLIGDTTTGRAVVVDPQRDVEQYIADATEHGLKIERVIETHFHADFLSGHLELAEQQGAVISFGAAGEGKVDFDADFLHDGQVLSLGE---VTLEVMATP 112          
BLAST of mRNA_P-wetherbeei_contig52523.1.1 vs. uniprot
Match: A0A6L6CWA6_9ACTN (MBL fold metallo-hydrolase n=7 Tax=root TaxID=1 RepID=A0A6L6CWA6_9ACTN)

HSP 1 Score: 152 bits (385), Expect = 2.030e-41
Identity = 76/115 (66.09%), Postives = 91/115 (79.13%), Query Frame = 1
Query:    1 MFFRQYYLDCLSHASYLVGDTGTGCAVVVDPQRDVDQYLVDARENGVTITKVIETHFHADFVSGHLELAARTGASIAYGRAAAGKAEFPVELLGSGDLITLGGDHGVVLEVRETP 345
            MFF+QYYL+CLSHASY+VGDT TG AVV+DPQRD+DQY+ DA  NG+ I KVIETHFHADF+SGHLELAA TGA+I +G AA G+ EF +E +  G  I+LG    V LE+ ETP
Sbjct:    1 MFFQQYYLECLSHASYMVGDTTTGMAVVIDPQRDIDQYVADAAANGLRIVKVIETHFHADFLSGHLELAAATGATIVFGAAAKGRVEFDIETMAHGSHISLGD---VDLEILETP 112          
BLAST of mRNA_P-wetherbeei_contig52523.1.1 vs. uniprot
Match: A0A6I3FLT1_9ACTN (MBL fold metallo-hydrolase n=2 Tax=root TaxID=1 RepID=A0A6I3FLT1_9ACTN)

HSP 1 Score: 151 bits (381), Expect = 2.470e-41
Identity = 77/115 (66.96%), Postives = 91/115 (79.13%), Query Frame = 1
Query:    1 MFFRQYYLDCLSHASYLVGDTGTGCAVVVDPQRDVDQYLVDARENGVTITKVIETHFHADFVSGHLELAARTGASIAYGRAAAGKAEFPVELLGSGDLITLGGDHGVVLEVRETP 345
            +FF+QYYL CLSHASYLVGDT +G AVVVDPQRD+ QYL DAR N + ITKVIETHFHADF+SGHLELAA TGA+I YG AA G+ +F +E   +G+ I+LG    V LE+ ETP
Sbjct:    9 LFFQQYYLQCLSHASYLVGDTSSGLAVVVDPQRDISQYLNDARANNLKITKVIETHFHADFLSGHLELAAATGATIVYGAAAMGRVDFAIETYRNGEHISLGA---VDLEILETP 120          
BLAST of mRNA_P-wetherbeei_contig52523.1.1 vs. uniprot
Match: A0A6I3HLK1_9ACTN (MBL fold metallo-hydrolase n=5 Tax=root TaxID=1 RepID=A0A6I3HLK1_9ACTN)

HSP 1 Score: 152 bits (384), Expect = 3.390e-41
Identity = 79/115 (68.70%), Postives = 90/115 (78.26%), Query Frame = 1
Query:    1 MFFRQYYLDCLSHASYLVGDTGTGCAVVVDPQRDVDQYLVDARENGVTITKVIETHFHADFVSGHLELAARTGASIAYGRAAAGKAEFPVELLGSGDLITLGGDHGVVLEVRETP 345
            MF +QYYL CLSHASYL+GD  TG AVVVDPQRDV++YL DA  +G TITKVIETHFHADF+SGHLELAART A I YG AAAG+  FP+E   +GD I+LG    V LE+ ETP
Sbjct:    8 MFLKQYYLGCLSHASYLIGDESTGRAVVVDPQRDVNEYLADAEAHGFTITKVIETHFHADFLSGHLELAARTDADIVYGAAAAGRVGFPIETHANGDHISLGK---VDLEILETP 119          
BLAST of mRNA_P-wetherbeei_contig52523.1.1 vs. uniprot
Match: A0A538HEY2_9ACTN (MBL fold metallo-hydrolase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538HEY2_9ACTN)

HSP 1 Score: 149 bits (375), Expect = 1.350e-40
Identity = 79/115 (68.70%), Postives = 88/115 (76.52%), Query Frame = 1
Query:    1 MFFRQYYLDCLSHASYLVGDTGTGCAVVVDPQRDVDQYLVDARENGVTITKVIETHFHADFVSGHLELAARTGASIAYGRAAAGKAEFPVELLGSGDLITLGGDHGVVLEVRETP 345
            MFFRQY+L CLSHASYLVGD  TG AVVVDPQRD+D YL DA E G+TI KVIETHFHADF+SGHLELAA+TGA I YG AA   A+FP+  L  GD + LG    V LE+R TP
Sbjct:    1 MFFRQYFLGCLSHASYLVGDETTGRAVVVDPQRDIDAYLADADEAGLTIEKVIETHFHADFLSGHLELAAKTGAEICYGEAA--DADFPITHLRDGDTVPLGD---VALEIRTTP 110          
BLAST of mRNA_P-wetherbeei_contig52523.1.1 vs. uniprot
Match: A0A0R2PY17_9ACTN (Sulfurtransferase (Fragment) n=1 Tax=Acidimicrobium sp. BACL17 MAG-120823-bin42 TaxID=1655575 RepID=A0A0R2PY17_9ACTN)

HSP 1 Score: 146 bits (369), Expect = 1.060e-39
Identity = 75/115 (65.22%), Postives = 86/115 (74.78%), Query Frame = 1
Query:    1 MFFRQYYLDCLSHASYLVGDTGTGCAVVVDPQRDVDQYLVDARENGVTITKVIETHFHADFVSGHLELAARTGASIAYGRAAAGKAEFPVELLGSGDLITLGGDHGVVLEVRETP 345
            MFFRQYYL CLSHASYLVGD  TG A+VVDPQRDVDQY+ DA   G+TIT V ETHFHADF+SGHLELA + GA I YG AAAG+ +FP+  +   +  +LG    V LEV ETP
Sbjct:    1 MFFRQYYLQCLSHASYLVGDRSTGKAIVVDPQRDVDQYIEDANAEGLTITSVYETHFHADFLSGHLELATKVGAEIVYGNAAAGRVDFPIRTMKHSEHHSLGR---VDLEVLETP 112          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52523.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7K1B9T3_9ACTN1.830e-4470.43MBL fold metallo-hydrolase n=2 Tax=root TaxID=1 Re... [more]
A0A7K0Y5S9_9ACTN7.850e-4470.43MBL fold metallo-hydrolase (Fragment) n=1 Tax=Acti... [more]
A0A3C2AZZ5_9ACTN1.700e-4370.43MBL fold metallo-hydrolase n=1 Tax=Acidimicrobiace... [more]
A0A7X9KHK7_9ACTN3.510e-4369.57MBL fold metallo-hydrolase n=2 Tax=Actinobacteria ... [more]
A0A3N5KNM0_9ACTN6.590e-4263.48MBL fold metallo-hydrolase (Fragment) n=1 Tax=Acti... [more]
A0A6L6CWA6_9ACTN2.030e-4166.09MBL fold metallo-hydrolase n=7 Tax=root TaxID=1 Re... [more]
A0A6I3FLT1_9ACTN2.470e-4166.96MBL fold metallo-hydrolase n=2 Tax=root TaxID=1 Re... [more]
A0A6I3HLK1_9ACTN3.390e-4168.70MBL fold metallo-hydrolase n=5 Tax=root TaxID=1 Re... [more]
A0A538HEY2_9ACTN1.350e-4068.70MBL fold metallo-hydrolase n=1 Tax=Actinomycetia b... [more]
A0A0R2PY17_9ACTN1.060e-3965.22Sulfurtransferase (Fragment) n=1 Tax=Acidimicrobiu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig52523contigP-wetherbeei_contig52523:68..415 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog471852.Tcur_3176
PFAMsLactamase_B,Rhodanese
Model size348
Max annot lvl201174|Actinobacteria
KEGG rclassRC00004,RC00137
KEGG koko:K01069
KEGG ReactionR01736
KEGG Pathwayko00620,map00620
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.79e-38
EggNOG OGsCOG0491@1|root,COG0607@1|root,COG0491@2|Bacteria,COG0607@2|Bacteria,2GN50@201174|Actinobacteria,4EG8M@85012|Streptosporangiales
EC3.1.2.6
DescriptionRhodanese Homology Domain
Cds size348
COG categoryP
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186786.777284-CDS-P-wetherbeei_contig52523:67..4151683186786.777284-CDS-P-wetherbeei_contig52523:67..415Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig52523 68..415 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig52523.1.1prot_P-wetherbeei_contig52523.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig52523 68..415 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig52523.1.1

>prot_P-wetherbeei_contig52523.1.1 ID=prot_P-wetherbeei_contig52523.1.1|Name=mRNA_P-wetherbeei_contig52523.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=116bp
MFFRQYYLDCLSHASYLVGDTGTGCAVVVDPQRDVDQYLVDARENGVTIT
KVIETHFHADFVSGHLELAARTGASIAYGRAAAGKAEFPVELLGSGDLIT
LGGDHGVVLEVRETP*
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mRNA from alignment at P-wetherbeei_contig52523:68..415-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig52523.1.1 ID=mRNA_P-wetherbeei_contig52523.1.1|Name=mRNA_P-wetherbeei_contig52523.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=348bp|location=Sequence derived from alignment at P-wetherbeei_contig52523:68..415- (Phaeothamnion wetherbeei SAG_119_79)
ATGTTCTTCCGGCAGTACTACCTCGATTGCCTGTCCCACGCGAGCTACCT CGTCGGCGATACGGGCACCGGGTGCGCCGTGGTCGTCGACCCACAACGGG ACGTCGACCAGTACCTCGTCGACGCACGCGAGAACGGCGTGACGATCACC AAGGTGATCGAGACGCACTTCCACGCCGACTTCGTCTCCGGCCACCTCGA GCTGGCCGCGCGCACAGGAGCATCGATCGCCTACGGCCGGGCCGCGGCTG GCAAGGCCGAGTTCCCGGTGGAGCTGCTCGGCTCGGGTGACCTCATCACG CTCGGCGGCGACCACGGGGTGGTGCTGGAGGTTCGTGAGACTCCCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig52523:68..415-

>mRNA_P-wetherbeei_contig52523.1.1 ID=mRNA_P-wetherbeei_contig52523.1.1|Name=mRNA_P-wetherbeei_contig52523.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=348bp|location=Sequence derived from alignment at P-wetherbeei_contig52523:68..415- (Phaeothamnion wetherbeei SAG_119_79)
ATGTTCTTCCGGCAGTACTACCTCGATTGCCTGTCCCACGCGAGCTACCT
CGTCGGCGATACGGGCACCGGGTGCGCCGTGGTCGTCGACCCACAACGGG
ACGTCGACCAGTACCTCGTCGACGCACGCGAGAACGGCGTGACGATCACC
AAGGTGATCGAGACGCACTTCCACGCCGACTTCGTCTCCGGCCACCTCGA
GCTGGCCGCGCGCACAGGAGCATCGATCGCCTACGGCCGGGCCGCGGCTG
GCAAGGCCGAGTTCCCGGTGGAGCTGCTCGGCTCGGGTGACCTCATCACG
CTCGGCGGCGACCACGGGGTGGTGCTGGAGGTTCGTGAGACTCCCTGA
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