prot_P-wetherbeei_contig52443.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig52443.1.1
Unique Nameprot_P-wetherbeei_contig52443.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length176
Homology
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BLAST of mRNA_P-wetherbeei_contig52443.1.1 vs. uniprot
Match: UPI001AE2B436 (pilus assembly protein TadG-related protein n=1 Tax=Azospirillum soli TaxID=1304799 RepID=UPI001AE2B436)

HSP 1 Score: 72.0 bits (175), Expect = 1.550e-11
Identity = 47/108 (43.52%), Postives = 59/108 (54.63%), Query Frame = 0 
Query:   71 FVLVDTTDETENYLFFPLLAAFAPGMDTSATVAPQAVAGFERQLCNAPPLMICNLNEATQGSGAPFNPTP--GQMIRAKMQGGGASWGPGVFGILDAPNAHGASAVRE 176
            FV V T   + N  F P+L     G  TS T A  A+AGF + +C  PP+ ICN N+    S   FN +   G+    +  G GASW PG FG+LDAPN  GASAV +
Sbjct:  158 FVEVTTETLSTNNFFGPVLG----GAQTSQTSAV-AIAGFTQVVCRMPPVWICNPNDNGTSSNPIFNASHWRGREALLRASGAGASWTPGNFGLLDAPNGQGASAVAD 260
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52443.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI001AE2B4361.550e-1143.52pilus assembly protein TadG-related protein n=1 Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig52443contigP-wetherbeei_contig52443:9..536 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig52443.1.1mRNA_P-wetherbeei_contig52443.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig52443 9..536 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig52443.1.1 ID=prot_P-wetherbeei_contig52443.1.1|Name=mRNA_P-wetherbeei_contig52443.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=176bp
VDTGFRLTLSGDSAVGVARLIFMSSLGPDPENPYTRSPVAGDVITATWTL
ADGLVLAAGMTSTVADRETGFVLVDTTDETENYLFFPLLAAFAPGMDTSA
TVAPQAVAGFERQLCNAPPLMICNLNEATQGSGAPFNPTPGQMIRAKMQG
GGASWGPGVFGILDAPNAHGASAVRE
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