mRNA_P-wetherbeei_contig52426.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig52426.1.1 vs. uniprot
Match: UPI0019A38E26 (DUF2336 domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=UPI0019A38E26) HSP 1 Score: 188 bits (478), Expect = 7.230e-55 Identity = 100/169 (59.17%), Postives = 125/169 (73.96%), Query Frame = 1
Query: 7 AGEDAGELARSLLDMMLSNPSAGQPQERALAADALLKLVPRIPLKALVLVVDRLSIMESPPHLLVSKLINDPRIEVSGPLLELCNHISDQVLGKVIATGHVSLMRLISRRRSVSATLSDQLLEFDDPSVFLTLVRNSGASFSHHAFPKLAEHAQRHHALLAPLATRPDL 513
A D+GELA SLLDMM + ++G PQERALAAD LL+++PR+P+K L++V +R++IME+PP LLV+KLI DPR EV PLLE C HI+DQ L G + R+I+RRR +S L+D L+ DPS LTL+RN GASFSH AF LAEHA HH+LLAPLATR DL
Sbjct: 120 ADPDSGELALSLLDMMSAGAASGLPQERALAADTLLRMIPRVPMKQLIMVCERVAIMETPPSLLVAKLIRDPRAEVVAPLLERCMHITDQDLMVAATEGDSTKRRMIARRRILSPVLADHLIAIGDPSTLLTLIRNPGASFSHDAFHILAEHASLHHSLLAPLATRADL 288
BLAST of mRNA_P-wetherbeei_contig52426.1.1 vs. uniprot
Match: A0A3N5GW38_9HYPH (DUF2336 domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A3N5GW38_9HYPH) HSP 1 Score: 182 bits (461), Expect = 3.170e-53 Identity = 100/171 (58.48%), Postives = 124/171 (72.51%), Query Frame = 1
Query: 1 ANAGEDAGELARSLLDMMLSNPSAGQPQERALAADALLKLVPRIPLKALVLVVDRLSIMESPPHLLVSKLINDPRIEVSGPLLELCNHISDQVLGKVIATGHVSLMRLISRRRSVSATLSDQLLEFDDPSVFLTLVRNSGASFSHHAFPKLAEHAQRHHALLAPLATRPDL 513
A A E++GELA SLL+MM ++G PQERALAAD LL+++PRIP+K L+ VV+R++IME+PP LLV+KLI DPR EV PLLE C HI+DQ L R+I+RRR +S L+D+L+ DPSV LTLVRN GA+FSH AF L E A HHA+LAPL TRPDL
Sbjct: 26 AEADEESGELALSLLEMMSMGAASGLPQERALAADTLLRILPRIPVKQLLAVVERVAIMETPPALLVAKLIRDPRPEVVAPLLERCMHITDQDLITAANEADAGKRRMIARRRVISPVLADRLIALADPSVVLTLVRNPGAAFSHDAFYVLGEVASEHHAILAPLVTRPDL 196
BLAST of mRNA_P-wetherbeei_contig52426.1.1 vs. uniprot
Match: A0A847ZRQ4_9HYPH (DUF2336 domain-containing protein n=1 Tax=Phyllobacteriaceae bacterium TaxID=1871068 RepID=A0A847ZRQ4_9HYPH) HSP 1 Score: 173 bits (438), Expect = 1.100e-47 Identity = 92/166 (55.42%), Postives = 120/166 (72.29%), Query Frame = 1
Query: 16 DAGELARSLLDMMLSNPSAGQPQERALAADALLKLVPRIPLKALVLVVDRLSIMESPPHLLVSKLINDPRIEVSGPLLELCNHISDQVLGKVIATGHVSLMRLISRRRSVSATLSDQLLEFDDPSVFLTLVRNSGASFSHHAFPKLAEHAQRHHALLAPLATRPDL 513
+ ELARSLLDMM S S+G P ERALAAD LL+L+P++ LK L ++ RL++M++PPHLLV+KLI D ++EVSGPLLE C HI+DQ L V++ + R+++RRR +S + DQL+ DDPSV LTLVRN+ A SH F L E A RH L+APL+TR DL
Sbjct: 305 ETAELARSLLDMMASGTSSGLPHERALAADTLLRLLPKLALKTLAMLAQRLAMMDNPPHLLVAKLIRDEQVEVSGPLLEDCMHITDQDLLMVVSEDNPGKRRMVARRRRLSRAVGDQLIATDDPSVLLTLVRNANAEISHDGFIALTEAAARHPELMAPLSTRSDL 470
BLAST of mRNA_P-wetherbeei_contig52426.1.1 vs. uniprot
Match: UPI001906DB2E (DUF2336 domain-containing protein n=1 Tax=Aestuariivirga sp. YIM B02566 TaxID=2800327 RepID=UPI001906DB2E) HSP 1 Score: 140 bits (352), Expect = 5.370e-36 Identity = 79/165 (47.88%), Postives = 110/165 (66.67%), Query Frame = 1
Query: 16 DAGELARSLLDMMLSNPSAGQPQERALAADALLKLVPRIPLKALVLVVDRLSIMESPPHLLVSKLINDPRIEVSGPLLELCNHISDQVLGKVIATGHVSLMRLISRRRSVSATLSDQLLEFDDPSVFLTLVRNSGASFSHHAFPKLAEHAQRHHALLAPLATRPD 510
+AGE A +LLD+M + PQERALA D LL+L+PR+PLK+L + +R+ +ME+P +LV +LINDPRIEVSGPLLE + D L V ++G+ + ++L++RRR +S LS+ L++ +D L LVRN GA+FS A +L A H L APL TR D
Sbjct: 200 EAGERAHALLDIMAIPTAGSLPQERALANDTLLRLIPRMPLKSLRHLAERVCLMETPSQMLVRRLINDPRIEVSGPLLENAMTVDDSDLIAVCSSGNPAKLKLMARRRVISPALSEALIQSNDVETLLNLVRNQGAAFSIEAMWRLTRFAAAHPVLQAPLVTRQD 364
BLAST of mRNA_P-wetherbeei_contig52426.1.1 vs. uniprot
Match: A0A537PEY7_9PROT (DUF2336 domain-containing protein n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537PEY7_9PROT) HSP 1 Score: 132 bits (332), Expect = 1.920e-33 Identity = 80/164 (48.78%), Postives = 104/164 (63.41%), Query Frame = 1
Query: 19 AGELARSLLDMMLSNPSAGQPQERALAADALLKLVPRIPLKALVLVVDRLSIMESPPHLLVSKLINDPRIEVSGPLLELCNHISDQVLGKVIATGHVSLMRLISRRRSVSATLSDQLLEFDDPSVFLTLVRNSGASFSHHAFPKLAEHAQRHHALLAPLATRPD 510
AGE A +LLD+M S PQERALA D LL+L+PR+PLK+L + R +ME+P +LV +LINDPRIEVSGPLLE + D L V T + + ++LI+RRR +S LS L++ + L LVRN GASFS + +L+ A H L APL TR D
Sbjct: 142 AGEQAHALLDIMAMPTSGSLPQERALANDTLLRLIPRMPLKSLRRLASRTCMMEAPSEMLVRRLINDPRIEVSGPLLENAMSVHDSDLIAVANTRNPASLKLIARRRLISPALSVALIQSNHVETLLNLVRNQGASFSIESIWRLSYFAADHPVLQAPLVTRQD 305
BLAST of mRNA_P-wetherbeei_contig52426.1.1 vs. uniprot
Match: A0A6G6WWZ8_9HYPH (DUF2336 domain-containing protein n=1 Tax=Nordella sp. HKS 07 TaxID=2712222 RepID=A0A6G6WWZ8_9HYPH) HSP 1 Score: 128 bits (322), Expect = 7.750e-32 Identity = 76/165 (46.06%), Postives = 105/165 (63.64%), Query Frame = 1
Query: 16 DAGELARSLLDMMLSNPSAGQPQERALAADALLKLVPRIPLKALVLVVDRLSIMESPPHLLVSKLINDPRIEVSGPLLELCNHISDQVLGKVIATGHVSLMRLISRRRSVSATLSDQLLEFDDPSVFLTLVRNSGASFSHHAFPKLAEHAQRHHALLAPLATRPD 510
+AG+ A +LLD+M PQERALA D LL+L+PR+PLK+L + +R+ +MESP LLV +LIND RIEVSGPLLE + D L V A+ + + ++L++RRR +S LS+ L+ + L L+RN GA+FS + +L A H L APL TR D
Sbjct: 175 EAGKRAHALLDIMAMPTVGSLPQERALANDTLLRLIPRMPLKSLRHLAERVCVMESPSQLLVRRLINDSRIEVSGPLLEQAMTVDDSDLIAVAASNNPAKLKLMARRRIISPALSEALIRSNHVETLLNLLRNPGAAFSIESMWRLTRIAAGHPVLQAPLVTRHD 339
BLAST of mRNA_P-wetherbeei_contig52426.1.1 vs. uniprot
Match: A0A2W2AQW8_9HYPH (Uncharacterized protein n=1 Tax=Aestuariivirga litoralis TaxID=2650924 RepID=A0A2W2AQW8_9HYPH) HSP 1 Score: 113 bits (282), Expect = 1.360e-26 Identity = 72/170 (42.35%), Postives = 106/170 (62.35%), Query Frame = 1
Query: 16 DAGELARSLLDMMLSNPSAGQPQERALAADALLKLVPRIPLKALVLVVDRLSIMESPPHLLVSKLINDPRIEVSGPLLELCNHISDQVLGKVIATGHVSL----MRLISRRRSVSATLSDQLLEFDDPSVFLTLVRNSGASFSHHAFPKLAEHAQRHHALLAPLATRPDL 513
DAG+ A +LLD+M PQER+LA D LL L+PR+ ++LV + +R++ M+SPP LLVS+L+ DPR +V G +LE H+++ G ++A+ H +RL+++RRSVS+ L+D ++ D L L+RN GA S AF ++ A H L APLA R DL
Sbjct: 66 DAGDAAVALLDIMWGAVDL-PPQERSLAGDTLLLLLPRLSHRSLVTLAERIAAMDSPPALLVSRLVRDPRPDVGGVVLERSAHVAE---GDLLASCHGGAGPERLRLLAKRRSVSSALADHIVASGDLLSLLALLRNPGAELSFQAFLGISRLAGEHPGLQAPLAMRTDL 231
BLAST of mRNA_P-wetherbeei_contig52426.1.1 vs. uniprot
Match: UPI001FEF214F (DUF2336 domain-containing protein n=1 Tax=Aestuariivirga litoralis TaxID=2650924 RepID=UPI001FEF214F) HSP 1 Score: 89.7 bits (221), Expect = 1.640e-18 Identity = 52/113 (46.02%), Postives = 68/113 (60.18%), Query Frame = 1
Query: 175 MESPPHLLVSKLINDPRIEVSGPLLELCNHISDQVLGKVIATGHVSLMRLISRRRSVSATLSDQLLEFDDPSVFLTLVRNSGASFSHHAFPKLAEHAQRHHALLAPLATRPDL 513
ME+PP LV++L + + VSGPLLE ++DQ L VIA G +RLI+RRR +S +S+ + DPS LTL+RN GA S F L + A+ LLAPL TR DL
Sbjct: 1 MEAPPPALVTRLAINEDLNVSGPLLEEGQQVTDQDLLAVIAKGAADKLRLIARRRRISRVVSEAIASSGDPSAMLTLIRNQGAEISGAGFEALMQAAKSDADLLAPLCTRQDL 113
BLAST of mRNA_P-wetherbeei_contig52426.1.1 vs. uniprot
Match: UPI000403DCB7 (DUF2336 domain-containing protein n=1 Tax=Hellea balneolensis TaxID=287478 RepID=UPI000403DCB7) HSP 1 Score: 66.2 bits (160), Expect = 1.250e-9 Identity = 50/163 (30.67%), Postives = 86/163 (52.76%), Query Frame = 1
Query: 25 ELARSLLDMMLSNPSAGQPQERALAADALLKLVPRIPLKALVLVVDRLSIMESPPHLLVSKLINDPRIEVSGPLLELCNHISDQVLGKVIATGHVSLMRLISRRRSVSATLSDQLLEFDDPSVFLTLVRNSGASFSHHAFPKLAEHAQRHHALLAPLATRPDL 513
+LA+ L D++ S PQER +A D L++L+ +K V RL ++ P ++ L D I+V+ +LE N +SD L ++ ++I+RRR VS ++ D ++EF + V L++N GASFS A ++ ++ H ++ L R +L
Sbjct: 27 QLAKRLSDVICIPASHLTPQERHMAGDILVELLRDADIKLRESVAKRLVMLNEAPRTILVILAKDD-IQVARHVLEESNSLSDSDLIQIARKVSSEHRKVIARRRKVSDSVVDVIVEFLEEDVVEVLLKNKGASFSETALQRILTISRSHQPYVSLLVKRDEL 188
BLAST of mRNA_P-wetherbeei_contig52426.1.1 vs. uniprot
Match: A0A160U1I3_BRASZ (Uncharacterized protein n=15 Tax=Bradyrhizobium TaxID=374 RepID=A0A160U1I3_BRASZ) HSP 1 Score: 60.1 bits (144), Expect = 1.600e-7 Identity = 45/164 (27.44%), Postives = 80/164 (48.78%), Query Frame = 1
Query: 22 GELARSLLDMMLSNPSAGQPQERALAADALLKLVPRIPLKALVLVVDRLSIMESPPHLLVSKLINDPRIEVSGPLLELCNHISDQVLGKVIATGHVSLMRLISRRRSVSATLSDQLLEFDDPSVFLTLVRNSGASFSHHAFPKLAEHAQRHHALLAPLATRPDL 513
GE+A ++ + + + +P L + L+ LVP L + V + +R S + + P LVS+L + I V+GP+L + D L ++ + +S R ++SA ++D L+E D V N+GA FS ++ +L + A + L + R DL
Sbjct: 24 GEIAHAISQLFFQDAANLRPDVVDLFDNLLIDLVPHAELASRVDLAERFSRLNNAPRHLVSQLARENEIAVAGPVLRHSPVLDDDALVEIARLKGQGHLLAMSERPTLSAVITDVLVERGDRDVVRRAAGNAGAEFSPGSYSELIKRAAQDGVLTLRIGQRSDL 187 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52426.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig52426.1.1 >prot_P-wetherbeei_contig52426.1.1 ID=prot_P-wetherbeei_contig52426.1.1|Name=mRNA_P-wetherbeei_contig52426.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=171bp ANAGEDAGELARSLLDMMLSNPSAGQPQERALAADALLKLVPRIPLKALVback to top mRNA from alignment at P-wetherbeei_contig52426:33..545+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig52426.1.1 ID=mRNA_P-wetherbeei_contig52426.1.1|Name=mRNA_P-wetherbeei_contig52426.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=513bp|location=Sequence derived from alignment at P-wetherbeei_contig52426:33..545+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig52426:33..545+ >mRNA_P-wetherbeei_contig52426.1.1 ID=mRNA_P-wetherbeei_contig52426.1.1|Name=mRNA_P-wetherbeei_contig52426.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=513bp|location=Sequence derived from alignment at P-wetherbeei_contig52426:33..545+ (Phaeothamnion wetherbeei SAG_119_79)back to top |