mRNA_P-wetherbeei_contig5240.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5240.1.3
Unique NamemRNA_P-wetherbeei_contig5240.1.3
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5240.1.3 vs. uniprot
Match: D8LRC0_ECTSI (W2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRC0_ECTSI)

HSP 1 Score: 377 bits (969), Expect = 1.650e-122
Identity = 235/414 (56.76%), Postives = 283/414 (68.36%), Query Frame = 3
Query:  231 SGIINIAGLEKVDDPEYRYKMPRVIGKVEGRGNGIKTVIANVVDLSISLKRDPGEITKFFGCELGAQTTWRPETERAIVNGAHTDAALQQLVHKYIELFVICPQCRLPESSYKIRHGIINHKCAACGCKDVVDMTHKLCTFILNQEKKAKSERAKDKAAKKEKESSGXXXXXXXXXXXXXXXXXXXXXXEAGAEPAAADDAKKSKK---------------SDDG--------FGSDEDEAPTLDNVCADDAGAFADSVAAVRRHISDRASPEKLAEEIRTAQTFAAFPVYQRLHIYIAARFVGAAAITQPDIGEIAPVLRLIRPGISLRDDQRHLIGAFELLCASQQPQLLPCFVTTLKFLYDLDLLEEEAVMAWAAAPRDPAAFTSPAVSGEQVAALKQRAAPFVTWLKEAE 1403
            SG INI+G E +DDPEYRYKMPRVIGKVEGRGNGIKTVI NV+DLS++LKRDPGE+ KFFG ELGAQT +  E ERAIVNGAHT+A LQQLVHKY+ELFV+CP CRLPES YKI++G I HKC ACG K++VDM+HKLCT+I+N  KKAK  +                XXXXXXXXXXXXXXXXXXX E        DD+ K KK               SDDG        FG   D   T  ++  +DA AF DSVAA+RRH+ D  S E + EEIRTAQTFAAFPV+ R+H+++AA F  A  +T+ DI   A +  +++   S  DDQRH+IGAFELLC   +P L+  F   LK LYD D++EEEA++ WA        FT PA+S EQVAAL+ +A PFVTWL+EA+
Sbjct:    2 SGNINISGTEPIDDPEYRYKMPRVIGKVEGRGNGIKTVIFNVMDLSLALKRDPGEVCKFFGTELGAQTRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKKSKX---------------XXXXXXXXXXXXXXXXXXXEEVSLN---GDDSAKEKKDXXXXXXXXXXXENTSDDGETKTTVNEFG---DVVATSGSLEVEDAVAFDDSVAAIRRHLDDGTSNENIFEEIRTAQTFAAFPVHYRIHLFVAASFATADKVTKDDIESRAAMFDMLK---SRPDDQRHIIGAFELLCQVHRPNLVGFFPVILKHLYDSDIVEEEAMLMWAGEQGRSEEFTPPALSDEQVAALRAKATPFVTWLEEAD 391          
BLAST of mRNA_P-wetherbeei_contig5240.1.3 vs. uniprot
Match: B8BW00_THAPS (W2 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BW00_THAPS)

HSP 1 Score: 275 bits (704), Expect = 4.410e-83
Identity = 191/400 (47.75%), Postives = 250/400 (62.50%), Query Frame = 3
Query:  237 IINIAGLEKVDDPEYRYKMPRVIGKVEGRGNGIKTVIANVVDLSISLKRDPGEITKFFGCELGAQTTWRPETERAIVNGAHTDAALQQLVHKYIELFVICPQCRLPESSYKIRHGIINHKCAACGCKDVVDMTHKLCTFILNQEKKAKSERAKDKAAKKEKESSGXXXXXXXXXXXXXXXXXXXXXXEAGAEPAAADDAKKSKKS-----------DDGFGSDEDEAPTLDNVCADDAGAFADSVAAVRRHISDR--ASPEKLAEEIRTAQTFAAFPVYQRLHIYIAARFVGAAAITQPDIGEIAPVLRLIRPGISLRDDQRHLIGAFELLCASQQPQLLPCFVTTLKFLYDLDLLEEEAVMAWAAAPRDPAAFTSPAVSGEQVAALKQRAAPFVTWLKE 1397
            I+NI+G   VDDPEYRYKMP V GK+EG+GNGIKTVI N+ D+ +SL RD GE+ KFFGCELGAQTT+  ET+RA+VNGAHTD  LQQ+VHKYIELFV+CP CRLPE+ YKI+ G+I HKCAACG KD VDMTHKLCT+IL Q+KKAK +  K  + KK+     XXXXXXXXXXXXXXXXXXXXXX                             D     D+D   T ++V  DDA A A +V A+++ ++D   ASP  +AE++   Q  +      ++HI++ + F       Q  + + AP +  I  G ++ +  RHLI +FE LC  +  +    F   LK L+D ++LEE+ ++ WA   R    +T  +V  +Q AAL+  A P V WL+E
Sbjct:    7 IVNISGTTPVDDPEYRYKMPTVYGKIEGKGNGIKTVIPNISDVGLSLHRDAGEVNKFFGCELGAQTTYNTETDRAVVNGAHTDQVLQQMVHKYIELFVLCPNCRLPETEYKIKSGMIYHKCAACGNKDAVDMTHKLCTYILAQDKKAKQDAKK--SGKKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDYDSYDDDDNGGTEEHV--DDANAMALAVEAMKKFLADNPDASPSAIAEKVVNEQMASGLKSQDKIHIFVQSVFT-PDFYKQKQVEKHAPAIAKITQGKNVME--RHLIASFEGLCVDEPKK----FAVVLKQLFDEEVLEEDTILEWAGEGRTD--YTLESVDEDQRAALRGEAEPVVVWLQE 393          
BLAST of mRNA_P-wetherbeei_contig5240.1.3 vs. uniprot
Match: A0A7S2KDW7_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KDW7_9STRA)

HSP 1 Score: 270 bits (690), Expect = 3.620e-81
Identity = 191/407 (46.93%), Postives = 252/407 (61.92%), Query Frame = 3
Query:  225 MASG-IINIAGLEKVDDPEYRYKMPRVIGKVEGRGNGIKTVIANVVDLSISLKRDPGEITKFFGCELGAQTTWRPETERAIVNGAHTDAALQQLVHKYIELFVICPQCRLPESSYKIRHGIINHKCAACGCKDVVDMTHKLCTFILNQEKKAKSERAKDKA-------------AKKEKESSGXXXXXXXXXXXXXXXXXXXXXXEAGAEPAAADDAKKSKKSDDGFGSDEDEAPTLDNVCADDAGAFADSVAAVRRHISDR--ASPEKLAEEIRTAQTFAAFPVYQRLHIYIAARFVGAAAITQPDIGEIAPVLRLIRPGISLRDDQRHLIGAFELLCASQQPQLLPCFVTTLKFLYDLDLLEEEAVMAWAAAPRDPAAFTSPAVSGEQVAALKQRAAPFVTWLKE 1397
            MA G IINI+G   VDDPEYRYKMP+V+GK+EGRGNG KTVI N+ +L++SL RDPGE+ KFFG ELGAQTT+  ET RA+VNG HTDA LQQ VHKY+E FVICP C LPE+ YKI+ G+I HKCAACG K++VDM+HKL  +IL Q+KKAK +                   + +E     XXXXXXXXXXXXXXXXXXXXXX+   E A  D +          G D+     +++V  DD  A A +V A ++ +SD   A+P  +++++   Q  +      R+HI++ A F      T+  + + AP +  I  G ++ +  RHLI A E LCA +  +    F   LK LYD D+LEE+ +M WA   R    +T  +V  EQ +A++  A P VTWL+E
Sbjct:    1 MAKGQIINISGTSPVDDPEYRYKMPKVVGKLEGRGNGSKTVIVNISELALSLHRDPGEVNKFFGTELGAQTTYSDETNRAVVNGHHTDAVLQQAVHKYVEAFVICPNCGLPETDYKIKSGVITHKCAACGAKEMVDMSHKLTNYILAQDKKAKQDAXXXXXXXXXXXXXXXXGDSDEEXXXXXXXXXXXXXXXXXXXXXXXXXXXDGELEDAVGDIS---------LGDDD-----VEHV--DDDNAMALAVEATKKFLSDNPDATPAAISDKVANEQMASGLKSQDRIHIFVRAAFTTDFFKTK-QVAKNAPSISKITQGKTVME--RHLISACECLCADEPKK----FAVLLKQLYDEDILEEDTIMEWAGEGRTD--YTLDSVDEEQRSAMRAEADPVVTWLQE 382          
BLAST of mRNA_P-wetherbeei_contig5240.1.3 vs. uniprot
Match: A0A6T5QBS0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5QBS0_HETAK)

HSP 1 Score: 270 bits (689), Expect = 9.200e-81
Identity = 194/404 (48.02%), Postives = 243/404 (60.15%), Query Frame = 3
Query:  240 INIAGLEKVDDPEYRYKMPRVIGKVEGRGNGIKTVIANVVDLSISLKRDPGEITKFFGCELGAQTTWRPETERAIVNGAHTDAALQQLVHKYIELFVICPQCRLPESSYKIRHGIINHKCAACGCKDVVDMTHKLCTFILNQEKKAK-SERAKDKAAKKEKESSGXXXXXXXXXXXXXXXXXXXXXXEAGAEPAAADDAKKSKKSDDGFGSDEDEAPT-------LDNVCADDAGAFADSVAAVRRHISDRASP----EKLAEEIRTAQTFAAFPVYQRLHIYIAARF----VGAAAITQPDIGEIAPVLRLIRPGISLRDDQRHLIGAFELLCASQQPQLLPCFVTTLKFLYDLDLLEEEAVMAWAAAPRDPAAFTSPAVSGEQVAALKQRAAPFVTWLKEAE 1403
            INI GLE +DDP YRYKMP++IGKVEGRGNGIKT I N+ +L+ SL RDPGE+ KFFGCELGAQT W  E E+A+VNGAH+D  LQQ+V +Y + FV+CP CRLPE+ YKI+   I HKC ACG K++VDM HKL T+IL   KKAK +E+AK            XXXXXXXXXXXXXXXXXXXXXX                                      L  +  +D  AF   V +VRR +   ASP      L EE+R AQT ++FP + R+H+ +AA F    VGAA     ++   A  LR    G  +    RH+IGAFELLCA ++P+L P     LKF +D D+LEEE ++ WA        ++   VS E++A +K   AP VTWL+EAE
Sbjct:    4 INIRGLEAIDDPAYRYKMPKIIGKVEGRGNGIKTRIVNITELATSLHRDPGEVCKFFGCELGAQTKWVEEEEKALVNGAHSDNDLQQMVFRYCQAFVLCPNCRLPETDYKIKSETIWHKCMACGAKEMVDMQHKLTTYILGNVKKAKLAEKAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLGGLSVEDQSAFDTGVESVRRFL---ASPGWDTPLLMEELRVAQTLSSFPAHFRVHLLVAAAFAEGPVGAA-----EVAARAADLRAAHNGNPIL--ARHMIGAFELLCARRRPELKPLLPAILKFCFDEDVLEEELILEWAE-DEGRTEYSPEGVSAEELAEMKALCAPLVTWLEEAE 396          
BLAST of mRNA_P-wetherbeei_contig5240.1.3 vs. uniprot
Match: A0A7S1D9Q5_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D9Q5_CYCTE)

HSP 1 Score: 268 bits (686), Expect = 2.330e-80
Identity = 193/406 (47.54%), Postives = 253/406 (62.32%), Query Frame = 3
Query:  237 IINIAGLEKVDDPEYRYKMPRVIGKVEGRGNGIKTVIANVVDLSISLKRDPGEITKFFGCELGAQTTWRPETERAIVNGAHTDAALQQLVHKYIELFVICPQCRLPESSYKIRHGIINHKCAACGCKDVVDMTHKLCTFILNQEKKAKSE-RAKDKAAKK-------------EKESSGXXXXXXXXXXXXXXXXXXXXXXEAGAEPAAADDAKKSKKSDDGFGSDEDEAPTLDNVCA-DDAGAFADSVAAVRRHISDRA--SPEKLAEEIRTAQTFAAFPVYQRLHIYIAARFVGAAAITQPDIGEIAPVLRLIRPGISLRDDQRHLIGAFELLCASQQPQLLPCFVTTLKFLYDLDLLEEEAVMAWAAAPRDPAAFTSPAVSGEQVAALKQRAAPFVTWLKEAE 1403
            +INIAG   VDDPEYRYKMP V GK+EGRGNGIKTVI N+ D+ +SL R+ GE+TKFFG ELGAQTT+ P+T+RA+VNGAHTD  LQ L+H+YIE FV+CP C LPE+ YKI++  I HKCAACG KD+VDM+HKLCT+IL Q+KKAK E ++KD                  +   S XXXXXXXXXXXXXXXXXXXXXX  G     A   KK    DDG  ++ DE   +D+    DD GA   +V A +++I+D +  S   LAE I   Q  +A   + ++HI + +  +      Q ++ + APV   I  G S+ +  RHLI A E   + ++P+  P  +   K  YD D LEE+ ++ WA   R+   +T  +V  E  A L+  A P V WL+EA+
Sbjct:    8 VINIAGTNPVDDPEYRYKMPAVYGKIEGRGNGIKTVIPNISDVGLSLHREAGEVTKFFGTELGAQTTYNPDTDRAVVNGAHTDDTLQDLMHRYIEKFVLCPNCSLPETEYKIKNDCIYHKCAACGSKDMVDMSHKLCTYILAQDKKAKKEAKSKDXXXXXXXXXXXXXXXXXXDXXGSDXXXXXXXXXXXXXXXXXXXXXXXGGNYLEEAMFGKK----DDGLDAEADEQDDVDSEAGVDDEGAMRLAVEATKKYIADNSDVSAADLAEVITNQQMASALKSHDKVHIAVQS-VLTPQFFKQNEVEKYAPVFSEITNGNSIME--RHLIAALEAF-SIEKPKSFPVLI---KQFYDEDALEEDTILEWAGEGRND--YTLESVDEETRAVLRAEAEPVVVWLQEAD 400          
BLAST of mRNA_P-wetherbeei_contig5240.1.3 vs. uniprot
Match: A0A448Z7H7_9STRA (W2 domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z7H7_9STRA)

HSP 1 Score: 267 bits (683), Expect = 6.660e-80
Identity = 192/409 (46.94%), Postives = 249/409 (60.88%), Query Frame = 3
Query:  237 IINIAGLEKVDDPEYRYKMPRVIGKVEGRGNGIKTVIANVVDLSISLKRDPGEITKFFGCELGAQTTWRPETERAIVNGAHTDAALQQLVHKYIELFVICPQCRLPESSYKIRHGIINHKCAACGCKDVVDMTHKLCTFILNQEKKAKSERAKDKAA--KKEKESSGXXXXXXXXXXXXXXXXXXXXXXEAGAEPAAADDAKKS-----------KKSDDGFGSDEDEAPTLDNVCADDAGAFADSVAAVRRHISDR--ASPEKLAEEIRTAQTFAAFPVYQRLHIYIAARFVGAAAIT-----QPDIGEIAPVLRLIRPGISLRDDQRHLIGAFELLCASQQPQLLPCFVTTLKFLYDLDLLEEEAVMAWAAAPRDPAAFTSPAVSGEQVAALKQRAAPFVTWLKEAE 1403
            +INIAG   VDDPEYRYKMP V GK+EG GNGIKT I N+  ++ SL R PGE+ KFFGCELGAQTT+  +T+RAIVNGAHTD  LQ+L+H+YIE FVICP C LPE+ Y I+ G+I H+CAACG K++VDM HKL  +IL Q+KKAK E+ K+K    KK ++ S XXXXXXXXXXXXXXXXXXXXXX      + A+DA              KK +D FGS+ D+         DD GA   +V   RR++ D   AS   +AE +   Q  +A   + ++ I++       AAIT       +I + APV+  I  G  + +  RHLI + E + +  +P   P  +   K  YD D LEEE ++ WA   R    +T  AV  +  AAL+  A P V WL+EA+
Sbjct:    8 VINIAGTTPVDDPEYRYKMPAVYGKIEGSGNGIKTAIPNITAVANSLHRAPGEVNKFFGCELGAQTTYNEDTDRAIVNGAHTDDVLQKLIHRYIEGFVICPTCGLPETKYSIKSGLIWHRCAACGSKELVDMGHKLTNYILAQDKKAKKEKGKNKKEDLKKGRDDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPAEDAGDEEKDYLKEAMFGKKEEDQFGSNSDDDEVASEAGVDDEGALELAVEGTRRYLLDNPDASAHDIAEVVTNQQMASALKAHDKIKIFV------RAAITPQFYKNKEIEKYAPVVSEIANGSQIIE--RHLIASLEFI-SKDKPTNFPVMI---KQFYDEDALEEETIIEWAEDGRSE--YTLEAVDEDTRAALRSEAEPVVVWLQEAD 402          
BLAST of mRNA_P-wetherbeei_contig5240.1.3 vs. uniprot
Match: A0A1E7FBJ2_9STRA (eIF-5_eIF-2B-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FBJ2_9STRA)

HSP 1 Score: 263 bits (671), Expect = 4.940e-78
Identity = 188/412 (45.63%), Postives = 245/412 (59.47%), Query Frame = 3
Query:  237 IINIAGLEKVDDPEYRYKMPRVIGKVEGRGNGIKTVIANVVDLSISLKRDPGEITKFFGCELGAQTTWRPETERAIVNGAHTDAALQQLVHKYIELFVICPQCRLPESSYKIRHGIINHKCAACGCKDVVDMTHKLCTFILNQEKKAKSERAKDKAA--------KKEKESSGXXXXXXXXXXXXXXXXXXXXXXEAGAEPAAADD-------------AKKSKKSDDGFGSDEDEAPTLDNVCADDAGAFADSVAAVRRHISDR--ASPEKLAEEIRTAQTFAAFPVYQRLHIYIAARFVGAAAITQPDIGEIAPVLRLIRPGISLRDDQRHLIGAFELLCASQQPQLLPCFVTTLKFLYDLDLLEEEAVMAWAAAPRDPAAFTSPAVSGEQVAALKQRAAPFVTWLKEAE 1403
            +INI+G   VDDPEYRYKMP V GK+EG GNGIKT I N+ +++ SL R PGE+ KFFGCELGAQTT+  ET+RAIVNG+HTD  LQ+L+H+Y+E FV+CP C LPE+ Y I++G I HKCAACG K++VDM HKL  +IL Q+KK K  + K+K A        KK+     XXXXXXXXXXXXXXXXXXXXXX       +A D             A   KK DDGFGSD+ +   +     DD GA   +V   R+ +     AS  ++ E +   Q  +A   + ++HI+  A F         +  + APV+  I  G  + +  RHLI + E L + ++P+  P  +   K LYD D LEEE ++ WA   R    +T  AV  E  AAL+  A P V WL+E E
Sbjct:    8 VINISGNNPVDDPEYRYKMPAVFGKIEGSGNGIKTAIPNITEVANSLYRPPGEVNKFFGCELGAQTTYNEETDRAIVNGSHTDDTLQKLMHRYVETFVLCPTCGLPETKYSIKNGTIWHKCAACGAKEMVDMNHKLTNYILAQDKKNKKLKNKNKKAAGKTNDLGKKDNSDEEXXXXXXXXXXXXXXXXXXXXXXXXXXSSTSAGDGDSIEEEKDYLKKAMYGKKEDDGFGSDDSDDDAVSEAGVDDQGAMLLAVEGTRKFLEANPDASVGEIVEMVTNQQMASALKAHDKVHIFARAAFT-PLFFKNKEAEKYAPVVSKISNGNKIIE--RHLIASLEFL-SIEKPKGFPVMI---KQLYDEDALEEETIIEWAEDGRSD--YTLAAVDEETRAALRGEAEPVVVWLQELE 410          
BLAST of mRNA_P-wetherbeei_contig5240.1.3 vs. uniprot
Match: K0TFV7_THAOC (W2 domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TFV7_THAOC)

HSP 1 Score: 256 bits (655), Expect = 5.130e-76
Identity = 180/404 (44.55%), Postives = 233/404 (57.67%), Query Frame = 3
Query:  237 IINIAGLEKVDDPEYRYKMPRVIGKVEGRGNGIKTVIANVVDLSISLKRDPGEITKFFGCELGAQTTWRPETERAIVNGAHTDAALQQLVHKYIELFVICPQCRLPESSYKIRHGIINHKCAACGCKDVVDMTHKLCTFILNQEKKAKSERAK---------------DKAAKKEKESSGXXXXXXXXXXXXXXXXXXXXXXEAGAEPAAADDAKKSKKSDDGFGSDEDEAPTLDNVCADDAGAFADSVAAVRRHISDR--ASPEKLAEEIRTAQTFAAFPVYQRLHIYIAARFVGAAAITQPDIGEIAPVLRLIRPGISLRDDQRHLIGAFELLCASQQPQLLPCFVTTLKFLYDLDLLEEEAVMAWAAAPRDPAAFTSPAVSGEQVAALKQRAAPFVTWLKE 1397
            I+NI+G   VDDPEYRYKM  V GK EGRGNG KTVI N+VD+  SL RDP E+ KFFGCELGAQTT+  ET RAIVNG HTD  LQ LVHKYIE FV+C  CRLPE+ YKI+ G I  KCAACG K++VDM+HKLCT+IL Q+KKAK++  K               D+           X    XXXXXXXXXXXXXXXX   A+ A+AD A+                P  +N+  DDA A A +V A ++ + +   A+P  +AE+I   Q  +      ++HI+I A F          +   A  +  I  G ++ +  R+LI A E LCA +      CF   +K L+D D+LEE+A++ WA   R    +T  +V+ +Q   ++  A P V WL E
Sbjct:    7 IVNISGTTPVDDPEYRYKMTLVFGKQEGRGNGSKTVIPNIVDVGSSLHRDPSEVNKFFGCELGAQTTYNAETHRAIVNGHHTDKVLQDLVHKYIETFVLCTNCRLPETEYKIKSGCIYQKCAACGAKEMVDMSHKLCTYILAQDKKAKADAKKKGXXXXXXXXXXXDSDEENXXXXXXXXDXKSKDXXXXXXXXXXXXXXXXXXEADDASADGAE----------------PATENL--DDANAMALAVEATKKFLEENTDATPSAIAEKITNEQMASGLKSQDKIHIFIRAAFT-PDFFKHKQVETHAETIGKITQGKNVME--RNLISACESLCADKPK----CFAVLIKQLFDEDVLEEDAILEWAGEGRTD--YTPDSVNEDQRCNMRAEAEPVVNWLME 383          
BLAST of mRNA_P-wetherbeei_contig5240.1.3 vs. uniprot
Match: A0A1Z5JLW0_FISSO (Translation initiation factor 5 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JLW0_FISSO)

HSP 1 Score: 255 bits (651), Expect = 2.510e-75
Identity = 183/400 (45.75%), Postives = 236/400 (59.00%), Query Frame = 3
Query:  219 VKMASGIINIAGLEKVDDPEYRYKMPRVIGKVEGRGNGIKTVIANVVDLSISLKRDPGEITKFFGCELGAQTTWRPETERAIVNGAHTDAALQQLVHKYIELFVICPQCRLPESSYKIRHGIINHKCAACGCKDVVDMTHKLCTFILNQEKKAKSERAKDKAAKKEKESSGXXXXXXXXXXXXXXXXXXXXXXEA-GAEPAAADDAKKSKKSDDGFGSDEDEAPTLDNVCADDAGAFADSVAAVRRHISDRASP--EKLAEEIRTAQTFAAFPVYQRLHIYIAARFVGAAAITQPDIGEIAPVLRLIRPGISLRDDQRHLIGAFELLCASQQPQLLPCFVTTLKFLYDLDLLEEEAVMAWAAAPRDPAAFTSPAVSGEQVAALKQRAAPFVTWLKEAEVE 1409
            V     IINIAG   VDDP YRYKMP V GK+EG GNGIKTV+ NV+D++ SL R+PGE++KFFG E+GAQ+ +  +T+RAIVNGAHTDA LQ+L+H+YIE FV+CP CRLPE+ YKI+   I H CAACG KD+VDM+HKLC +IL + KKAK ++ K            XXXXXXXXXXXXXXXXXXXXXX     +     DA   KK D+                 DD  AF  +V A +  I + A+   ++L E +   Q  +A   + ++ I I A F  +      ++ + APV+  I    S R  +RH+I A E  C  +       F   LK LYD D L+EE ++ WA   R    FT P+V  +  A L+  A P V WL+EAE E
Sbjct:    2 VVRGGTIINIAGTTPVDDPAYRYKMPAVFGKIEGSGNGIKTVLVNVLDVANSLHREPGEVSKFFGTEMGAQSRYSADTDRAIVNGAHTDATLQELMHRYIEKFVLCPTCRLPETKYKIKSDTIYHSCAACGAKDMVDMSHKLCNYILAENKKAKKDKGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGDKNYIKDALSGKKDDEFXXXXXXXXXXXXTEVVDDDSAFQLAVDATKTFIKENANATDDQLIEYVTNQQMASALKSHDKIRILILAAFT-SDFYKNKEVEKYAPVIARIAN--SNRIMERHIISALEAFCVEKTKN----FPVLLKQLYDEDALDEETILEWADQGRSE--FTLPSVDEDSRAILRGEAEPVVVWLQEAESE 392          
BLAST of mRNA_P-wetherbeei_contig5240.1.3 vs. uniprot
Match: A0A7S4E4E7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E4E7_9STRA)

HSP 1 Score: 251 bits (642), Expect = 3.730e-74
Identity = 178/398 (44.72%), Postives = 224/398 (56.28%), Query Frame = 3
Query:  237 IINIAGLEKVDDPEYRYKMPRVIGKVEGRGNGIKTVIANVVDLSISLKRDPGEITKFFGCELGAQTTWRPETERAIVNGAHTDAALQQLVHKYIELFVICPQCRLPESSYKIRHGIINHKCAACGCKDVVDMTHKLCTFILNQEKKAKSERAKDKAAKKEKESSGXXXXXXXXXXXXXXXXXXXXXXEAGAEPAAADDAKKSKKSDDGFGSDEDEAPTLDNVCADDAGAFADSVAAVRRHISDRASPEKLAEEIRTAQTFAAFPVYQRLHIYIAARFVGAAAITQPDIGEIAPVLRLIRPGISLRDDQRH-LIGAFELLCASQQPQLLPCFVTTLKFLYDLDLLEEEAVMAWAAAPRD---PAAFTSPAVSGEQVAALKQRAAPFVTWLKEAEVEGGE 1418
            IINIAG + +DDPEYRYKMPR+IGKVEGRGNGIKT I N+VD++ SL R PGE+TKFFGCELGAQTT+  +TER+IVNGAH    LQ  +  YIE FV+CP C+LPE+SYKI+H II H C ACG ++  DM HKL T+IL Q K  K  +AKDK          XXX   XXXXXXXXXXXXXXXX                                     ++AG    ++  +R  ++      +   E+R  QTF A P  +R  I  AA F   + + +  + E AP+L+        +D Q + LI   E  C  Q+P L   F   LK LYD D++EEE ++ W  A  D   P     PAV  +  AA    + PFVTWL+EAE +  E
Sbjct:    4 IINIAGAQAIDDPEYRYKMPRIIGKVEGRGNGIKTAIPNMVDVASSLHRPPGEVTKFFGCELGAQTTYNDDTERSIVNGAHETRVLQDKLSVYIEKFVLCPACKLPETSYKIKHEIIYHNCLACGAREPCDMQHKLTTYILKQHKIEKKAKAKDKXXXXXXXXXXXXXDGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------XXXXXXXXNPEEAGPLGSAIRGIREFVAGGKPVGETVSELRAVQTFCALPRNERGFILCAAAFEDGSTLLK-QLPERAPLLKAFA-----KDAQPYSLIYGLEKFCLIQKPPLTAKFALVLKALYDDDVVEEEDILKWHDAGVDGIDPDVHKPPAVDAQASAAFLAASEPFVTWLREAESDTEE 386          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5240.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRC0_ECTSI1.650e-12256.76W2 domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
B8BW00_THAPS4.410e-8347.75W2 domain-containing protein n=1 Tax=Thalassiosira... [more]
A0A7S2KDW7_9STRA3.620e-8146.93Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A6T5QBS0_HETAK9.200e-8148.02Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1D9Q5_CYCTE2.330e-8047.54Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A448Z7H7_9STRA6.660e-8046.94W2 domain-containing protein n=1 Tax=Pseudo-nitzsc... [more]
A0A1E7FBJ2_9STRA4.940e-7845.63eIF-5_eIF-2B-domain-containing protein n=1 Tax=Fra... [more]
K0TFV7_THAOC5.130e-7644.55W2 domain-containing protein n=1 Tax=Thalassiosira... [more]
A0A1Z5JLW0_FISSO2.510e-7545.75Translation initiation factor 5 n=2 Tax=Fistulifer... [more]
A0A7S4E4E7_9STRA3.730e-7444.72Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5240contigP-wetherbeei_contig5240:2..3529 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LRC0
Preferred nameEIF5
PFAMsW2,eIF-5_eIF-2B
Model size1847
Max annot lvl2759|Eukaryota
KEGG koko:K03262,ko:K10683
KEGG Pathwayko03013,ko03440,ko04214,map03013,map03440,map04214
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464
Exons7
Evalue4.43e-126
EggNOG OGsCOG1601@1|root,KOG2767@2759|Eukaryota
Descriptiontranslation initiation factor activity
Cds size1230
COG categoryJ
BRITEko00000,ko00001,ko03012,ko03019,ko03036,ko04121
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5240.1.3prot_P-wetherbeei_contig5240.1.3Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5240 395..3305 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186785.2329662-UTR-P-wetherbeei_contig5240:1..3941683186785.2329662-UTR-P-wetherbeei_contig5240:1..394Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5240 2..394 -
1683186785.3181634-UTR-P-wetherbeei_contig5240:3305..35291683186785.3181634-UTR-P-wetherbeei_contig5240:3305..3529Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5240 3306..3529 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186785.248187-CDS-P-wetherbeei_contig5240:394..8961683186785.248187-CDS-P-wetherbeei_contig5240:394..896Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5240 395..896 -
1683186785.264137-CDS-P-wetherbeei_contig5240:1147..12511683186785.264137-CDS-P-wetherbeei_contig5240:1147..1251Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5240 1148..1251 -
1683186785.2728872-CDS-P-wetherbeei_contig5240:1689..18721683186785.2728872-CDS-P-wetherbeei_contig5240:1689..1872Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5240 1690..1872 -
1683186785.2810059-CDS-P-wetherbeei_contig5240:2197..25211683186785.2810059-CDS-P-wetherbeei_contig5240:2197..2521Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5240 2198..2521 -
1683186785.2892103-CDS-P-wetherbeei_contig5240:2679..27221683186785.2892103-CDS-P-wetherbeei_contig5240:2679..2722Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5240 2680..2722 -
1683186785.2981656-CDS-P-wetherbeei_contig5240:2978..29931683186785.2981656-CDS-P-wetherbeei_contig5240:2978..2993Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5240 2979..2993 -
1683186785.3099468-CDS-P-wetherbeei_contig5240:3246..33051683186785.3099468-CDS-P-wetherbeei_contig5240:3246..3305Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5240 3247..3305 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5240.1.3

>prot_P-wetherbeei_contig5240.1.3 ID=prot_P-wetherbeei_contig5240.1.3|Name=mRNA_P-wetherbeei_contig5240.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=410bp
MASGIINIAGLEKVDDPEYRYKMPRVIGKVEGRGNGIKTVIANVVDLSIS
LKRDPGEITKFFGCELGAQTTWRPETERAIVNGAHTDAALQQLVHKYIEL
FVICPQCRLPESSYKIRHGIINHKCAACGCKDVVDMTHKLCTFILNQEKK
AKSERAKDKAAKKEKESSGDKKDKKEKGEKKDKKSKKDKEGEAGAEPAAA
DDAKKSKKSDDGFGSDEDEAPTLDNVCADDAGAFADSVAAVRRHISDRAS
PEKLAEEIRTAQTFAAFPVYQRLHIYIAARFVGAAAITQPDIGEIAPVLR
LIRPGISLRDDQRHLIGAFELLCASQQPQLLPCFVTTLKFLYDLDLLEEE
AVMAWAAAPRDPAAFTSPAVSGEQVAALKQRAAPFVTWLKEAEVEGGEED
DDEDDEEED*
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mRNA from alignment at P-wetherbeei_contig5240:2..3529-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5240.1.3 ID=mRNA_P-wetherbeei_contig5240.1.3|Name=mRNA_P-wetherbeei_contig5240.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3528bp|location=Sequence derived from alignment at P-wetherbeei_contig5240:2..3529- (Phaeothamnion wetherbeei SAG_119_79)
GAAGGTCGTCGGTGCATGGGATTGGAAGGTGGCAGCCTCCAAACACAAAA ACATTGCGTCGTCGGAGTCGGCGTCCCAAATACATGCGCGGGAGAGATCG CGGATCCCAGGGTGCGGAGTTTGCAGCAATCATTGCCTGCGAAACGAAAG AGAACGCGAGCTTCGGCTGATCACGGCGGCGAATATACACCGCGGGTTCG CCTTACCGGCGTCCTTAGGTCAAGATGGCTAGCGGGATCATCAACATCGC GGGGTTGGAGAAGGTGGACGATCCTGAATACAGGCAAGTCGTCTTCCTTT CCATTTAATTCGATATTTAGCTTATTGCTCGTTGTGCGCTCGCCTTCCCC CAACGCCGGCCCGCTTTATCGCGGCTTTATCTGGTGGTCCCTCTCCAAGG CCATGGCTCAAGTTTCGTTTGCTCATTCTTAGTTCCCGTTCCCGGCCCGA GGGCCGCGCCTACCGCTCTCCTGCCATGCAGTTGACACTCAATATCCTCG TTTCCCTTGCTGACCCCGCCACCTCGCCAATCGCAGGTACAAGATGCCAA GGTAAGCGGACATGCCTCTTCCATCCTCGGAGGATGAGTCCAGCTCTCTC GTCCCTCTGCTTGTTTTGCCGTTTAAGCGTTGCCCGATTCCGTGGTGATG GCTTTCGTGCTGCCGCGACGTTAGCCCGCTGCCGGCTCACTTTCACGTGC TCTTGCAGGCTTGTTTGTGCGCCGGATGCCACTCCTGTTGCTCTTTTGAC ATTTGAAATGATTTTAACGCCGCATATTTCTTTCTACTCCCGTTTTCGGT CGTACAGAGTGATTGGTAAGGTGGAGGGCCGTGGCAACGGCATCAAGACG GTAAGCTGGAAGTTTTTGCCGCTTTTCCTAGCGCAGCTGTTCTATGCTTG GCTTCACTTTTGACCCATAAAAGTCAACTTCCTTTTCCTCCTACCTGCCC GTTGAACCAGCAACACGAAACTGACGAAATCCCAACATTAAAACCGCCGT CGTCGCAGGTCATTGCGAACGTGGTGGACCTGTCCATCTCGCTCAAGCGC GACCCCGGTGAGATCACCAAGTTCTTCGGCTGCGAGCTCGGCGCGCAGAC AACCTGGCGGCCGGAGACGGAGCGCGCCATCGTCAACGGCGCCCACACGG ACGCGGCGCTGCAGCAGCTGGTGCACAAGTACATTGAGCTGTTTGTCATC TGCCCACAGTGCCGGCTGCCTGAGTCGAGCTACAAGATCCGGCACGGCAT CATCAACCACAAGTGCGCGGCGTGCGGCTGCAAGGATGTCGTCGACATGA CGCACAAGCTCTGCACCTTCATCCTCAACCAGGTATCTATCGCTTTCTGT TCTGTTTTCTGTTTCTGATTTATAAAATAAGAAAATACAAAACAAGCAAT GTCTTTGTTTTCTGCGCTGTGTGTTTGTTAGACAGTTCGATTCTGTCTCT CTTCCCTTTTTGCTCCTGTTAAGATCAACAGCACTTTTCGTTTGCAGCAA TCATATCCCTAAAGTTTAAAAAGGATGCTTTCCTGTTCCTCGTCTCGTCT TCGGCGCCGCATCAGCCATCCTCACACTCCCGTCTTGCCTTGCACGCTTT GTTTCCTGTACCATCCCCTTTGTCGGTTTGCACTGATGGTGCCGTGCGAT TCCACAGGAGAAGAAGGCGAAGAGCGAGCGGGCCAAGGACAAGGCGGCGA AGAAGGAGAAGGAGAGCAGTGGCGACAAGAAGGACAAGAAGGAAAAGGGC GAGAAGAAGGACAAGAAGAGCAAGAAGGACAAGGAGGGCGAAGCCGGCGC TGAGCCCGCCGCCGCCGACGACGCCAAGAAGAGCAAGAAAGTAAGACTTG GGAAACGGTTGTTGCATGGCAGGAAGTTTCTGTTCTTACCCTTCTCGTAT TCCTTTCTTTTCAGCTGGGTACTTGGTGTCGTGTCATCCCAATGAGCGCC GACTCTCTTTTGTTCGTGCTGCAGCCGCAGCAGGGCAGTGCCAGCTCTGC TTTCAGCTGACAGGGGTCGGTGCAAAGAACGCGTGAGTGATTCCACATCC CGTCTTTTGGCCTTCCCGGCCTTCTGTTATTGTTGCTGCTGCCGCAACTC ATCCCTTTCGCAGGACAAGAAGGAGAAGTCCTCGAAGAAGGACAAGGCGG GCGTCGATGACAACTCCTCCGGCGGCGATGCCGACTCCAACGCCTCCCCC AAGACAAACGGCCACCGCGCCTCCAACGGCAACGGCCATGCCGCTGCGCG CAACGGCTCGGACGCCGCCGACGACGAGTCGGACGACGGCTTCGGCTCCG ACGAGGACGAGGCGCCGACGCTCGACAACGTCTGCGCGGACGACGCCGGC GCCTTCGCAGACTCGGTCGCCGCCGTCAGGCGGTAAGTTCTTCGGTTGGT TTTTGTGTCGGTTTTAACTTTTTGGTTTGCTTTTCTGGTTTCTGGTCTGA TATTTTGTGTTGCCGTCCCTATGGGGGCGGTGATTTACTGGACGGCTTGT GCGGGCGTGGTTATCTAATGATCGTCGTTATCTCTAGTCGTTACATCTTT TGCTGTTTCACAACAAACGCTCCAGGTCACCAGTTCGCACTCTTCTTCGC CCGGCTTTCATATCTGCCATCTGCCATCTGCAGGCACATCTCCGATAGGG CGTCGCCCGAGAAGCTGGCCGAGGAGATCCGCACGGCGCAAACCTTCGCC GCGTTCCCCGTCTACCAGCGCCTCCATATCTACATCGCCGCCCGCTTCGT CGGCGCCGCCGCCATTACGCAGCCCGACATCGGCGAGATCGCGCCGGTCC TCCGCCTCATCCGCCCGGGCATTTCCCTGCGCGACGACCAGCGGCACCTC ATCGGCGCGTTCGAGCTGCTCTGCGCGTCGCAGCAACCGCAGCTGCTGCC GTGCTTCGTCACGACCCTCAAGTTCCTCTACGACCTGGACCTGCTGGAAG AGGAAGCGGTCATGGCGTGGGCGGCGGCGCCGCGCGACCCCGCGGCGTTC ACGAGCCCGGCAGTGTCGGGGGAGCAGGTGGCGGCGCTGAAACAGCGTGC CGCGCCGTTCGTGACGTGGCTCAAGGAGGCCGAGGTGGAGGGCGGGGAGG AGGACGATGACGAGGACGACGAGGAGGAGGACTGAACCGTCTGAATCCGT CGTTTCTTTCCTGCGCGAGAGGCGTCGCGCCGAGTTGTGAGGGGTCGAGC GGCGTTGTGAGAGTCGAGCTGCGGCGACGGAGGGGCCTTCTCTGACGCTC TCATCGCGGTTCTTGGGAGGTTCTTGAGAGAGTCTTTGAGGGGCGGAAGC GCGCGCGGGAGGTTCTTGGGCATGGCGGAGCGCGGGAGGTGCGGCATCTC TTTGTTCTGGCTTGGGGGCTTGGGCTGGGTCGGATTGTGGGCGGGCGGGT GGCTGGGAAAGGCCGATTTGGGGGCCAACAGGGACTGTTCAGCGGCGAAC GGCGGCGAGAGACGCTGGCGGGTAGGCGCCGCAGCGGAGGATGCCGTGGC GGCGAGAGCTGCGCCGTGGCAGCAATGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5240:2..3529-

>mRNA_P-wetherbeei_contig5240.1.3 ID=mRNA_P-wetherbeei_contig5240.1.3|Name=mRNA_P-wetherbeei_contig5240.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1230bp|location=Sequence derived from alignment at P-wetherbeei_contig5240:2..3529- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCTAGCGGGATCATCAACATCGCGGGGTTGGAGAAGGTGGACGATCC
TGAATACAGGTACAAGATGCCAAGAGTGATTGGTAAGGTGGAGGGCCGTG
GCAACGGCATCAAGACGGTCATTGCGAACGTGGTGGACCTGTCCATCTCG
CTCAAGCGCGACCCCGGTGAGATCACCAAGTTCTTCGGCTGCGAGCTCGG
CGCGCAGACAACCTGGCGGCCGGAGACGGAGCGCGCCATCGTCAACGGCG
CCCACACGGACGCGGCGCTGCAGCAGCTGGTGCACAAGTACATTGAGCTG
TTTGTCATCTGCCCACAGTGCCGGCTGCCTGAGTCGAGCTACAAGATCCG
GCACGGCATCATCAACCACAAGTGCGCGGCGTGCGGCTGCAAGGATGTCG
TCGACATGACGCACAAGCTCTGCACCTTCATCCTCAACCAGGAGAAGAAG
GCGAAGAGCGAGCGGGCCAAGGACAAGGCGGCGAAGAAGGAGAAGGAGAG
CAGTGGCGACAAGAAGGACAAGAAGGAAAAGGGCGAGAAGAAGGACAAGA
AGAGCAAGAAGGACAAGGAGGGCGAAGCCGGCGCTGAGCCCGCCGCCGCC
GACGACGCCAAGAAGAGCAAGAAATCGGACGACGGCTTCGGCTCCGACGA
GGACGAGGCGCCGACGCTCGACAACGTCTGCGCGGACGACGCCGGCGCCT
TCGCAGACTCGGTCGCCGCCGTCAGGCGGCACATCTCCGATAGGGCGTCG
CCCGAGAAGCTGGCCGAGGAGATCCGCACGGCGCAAACCTTCGCCGCGTT
CCCCGTCTACCAGCGCCTCCATATCTACATCGCCGCCCGCTTCGTCGGCG
CCGCCGCCATTACGCAGCCCGACATCGGCGAGATCGCGCCGGTCCTCCGC
CTCATCCGCCCGGGCATTTCCCTGCGCGACGACCAGCGGCACCTCATCGG
CGCGTTCGAGCTGCTCTGCGCGTCGCAGCAACCGCAGCTGCTGCCGTGCT
TCGTCACGACCCTCAAGTTCCTCTACGACCTGGACCTGCTGGAAGAGGAA
GCGGTCATGGCGTGGGCGGCGGCGCCGCGCGACCCCGCGGCGTTCACGAG
CCCGGCAGTGTCGGGGGAGCAGGTGGCGGCGCTGAAACAGCGTGCCGCGC
CGTTCGTGACGTGGCTCAAGGAGGCCGAGGTGGAGGGCGGGGAGGAGGAC
GATGACGAGGACGACGAGGAGGAGGACTGA
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