mRNA_P-wetherbeei_contig5230.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5230.1.1
Unique NamemRNA_P-wetherbeei_contig5230.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5230.1.1 vs. uniprot
Match: A0A835ZIF0_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIF0_9STRA)

HSP 1 Score: 255 bits (652), Expect = 4.650e-83
Identity = 123/163 (75.46%), Postives = 136/163 (83.44%), Query Frame = 1
Query:    7 QICAAIRHMHERRIMHRDLKPANIFLTLEGQVKVGDLGLGRAMSENTLEAHSKVGTPLYMSPEVLRGDGYDWKSDIWSLGCLLYELAMLRSPFKSEGLNLYSLFQKISKGDYAPLPEHYSEQLKDLAYRMISTDAADRPGIDEV--------------GRLCC 453
            QICA I+HMH RR+MHRDLKPANIFLTLEGQ+KVGDLGLGRA+SE+TLEAHSKVGTPLYMSPEVLRG GYDWKSDIWSLGC+LYELAMLRSPFK EGLNLYSLFQKIS+GDYAPLP HYSE L+ LAY MIST+   RP ++ V              G++CC
Sbjct:  147 QICAGIQHMHARRVMHRDLKPANIFLTLEGQIKVGDLGLGRALSEDTLEAHSKVGTPLYMSPEVLRGGGYDWKSDIWSLGCILYELAMLRSPFKGEGLNLYSLFQKISQGDYAPLPTHYSEDLRQLAYAMISTEPVRRPDVEAVCLVADRMREATARGGQVCC 309          
BLAST of mRNA_P-wetherbeei_contig5230.1.1 vs. uniprot
Match: A0A7S1TSS1_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TSS1_9STRA)

HSP 1 Score: 251 bits (640), Expect = 3.530e-80
Identity = 121/147 (82.31%), Postives = 132/147 (89.80%), Query Frame = 1
Query:    4 NQICAAIRHMHERRIMHRDLKPANIFLTLEGQVKVGDLGLGRAMSENTLEAHSKVGTPLYMSPEVLRGDGYDWKSDIWSLGCLLYELAMLRSPFKSEGLNLYSLFQKISKGDYAPLPEHYSEQLKDLAYRMISTDAADRPGIDEVGR 444
            +QI  AI HMH RRIMHRDLKPANIFLTL GQVKVGDLGLGRAMSE+T+EAHSKVGTPLYMSPEVLRG GYDWKSDIWSLGCLLYELAML+SPFKSEGLNLYSLFQKIS+GDY PLP+ YSE L++LAY MI T+A +RP I E+ R
Sbjct:  133 SQIAEAIAHMHSRRIMHRDLKPANIFLTLNGQVKVGDLGLGRAMSEHTMEAHSKVGTPLYMSPEVLRGGGYDWKSDIWSLGCLLYELAMLKSPFKSEGLNLYSLFQKISRGDYQPLPDFYSEDLRNLAYAMIRTEAQERPDIAEIVR 279          
BLAST of mRNA_P-wetherbeei_contig5230.1.1 vs. uniprot
Match: A0A7S2C573_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C573_9STRA)

HSP 1 Score: 243 bits (620), Expect = 9.030e-78
Identity = 115/144 (79.86%), Postives = 130/144 (90.28%), Query Frame = 1
Query:    7 QICAAIRHMHERRIMHRDLKPANIFLTLEGQVKVGDLGLGRAMSENTLEAHSKVGTPLYMSPEVLRGDGYDWKSDIWSLGCLLYELAMLRSPFKSEGLNLYSLFQKISKGDYAPLPEHYSEQLKDLAYRMISTDAADRPGIDEV 438
            QIC AI+HMHERRIMHRDLKPANIFLTL G VKVGDLGLGR +SE+T+EAHSKVGTPLYMSPEVLRGDGYD++SD+WS+GCLLYELAML+SPFKSEGLNLYSLFQKISK D+ PLP HYSE L++LAY MI+ D   RP ++EV
Sbjct:  141 QICEAIQHMHERRIMHRDLKPANIFLTLNGTVKVGDLGLGRELSEHTVEAHSKVGTPLYMSPEVLRGDGYDFRSDVWSVGCLLYELAMLKSPFKSEGLNLYSLFQKISKADFQPLPVHYSEDLRNLAYSMINIDPQQRPRMEEV 284          
BLAST of mRNA_P-wetherbeei_contig5230.1.1 vs. uniprot
Match: F0Y2C1_AURAN (Protein kinase domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2C1_AURAN)

HSP 1 Score: 239 bits (611), Expect = 2.250e-77
Identity = 112/142 (78.87%), Postives = 126/142 (88.73%), Query Frame = 1
Query:    4 NQICAAIRHMHERRIMHRDLKPANIFLTLEGQVKVGDLGLGRAMSENTLEAHSKVGTPLYMSPEVLRGDGYDWKSDIWSLGCLLYELAMLRSPFKSEGLNLYSLFQKISKGDYAPLPEHYSEQLKDLAYRMISTDAADRPGI 429
            +QIC A+ HMHE+RI+HRDLKPAN+FLTL G VKVGDLGLGR MSE+T EAHSKVGTPLYMSPEVLRGDGYDWKSD+WSLGC+LYELAMLRSPFK+EGLNLYSLFQKISK DY PLP+ YS  L+DLA  M+S D A+RP +
Sbjct:  112 SQICDALAHMHEQRILHRDLKPANVFLTLNGTVKVGDLGLGRMMSEHTFEAHSKVGTPLYMSPEVLRGDGYDWKSDVWSLGCVLYELAMLRSPFKAEGLNLYSLFQKISKADYEPLPDTYSAPLRDLATAMLSVDPAERPDV 253          
BLAST of mRNA_P-wetherbeei_contig5230.1.1 vs. uniprot
Match: K3WH02_GLOUD (Protein kinase domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WH02_GLOUD)

HSP 1 Score: 244 bits (624), Expect = 6.960e-74
Identity = 117/148 (79.05%), Postives = 129/148 (87.16%), Query Frame = 1
Query:    7 QICAAIRHMHERRIMHRDLKPANIFLTLEGQVKVGDLGLGRAMSENTLEAHSKVGTPLYMSPEVLRGDGYDWKSDIWSLGCLLYELAMLRSPFKSEGLNLYSLFQKISKGDYAPLPEHYSEQLKDLAYRMISTDAADRPGIDEVGRLC 450
            Q+CAAI HMH  RIMHRDLKPANIFLTL+G VKVGDLGLGR +SENT+EAHSKVGTPLYMSPEVLRG+GYDWKSD+WSLGC+LYELAMLRSPFKSEGLNLY LFQKI+KGDY  LP  YSE L+ L  RMIS  A+DRP ++EV  LC
Sbjct:  131 QLCAAILHMHNARIMHRDLKPANIFLTLQGVVKVGDLGLGRHLSENTMEAHSKVGTPLYMSPEVLRGEGYDWKSDVWSLGCILYELAMLRSPFKSEGLNLYGLFQKINKGDYEALPAIYSEHLRSLVTRMISLGASDRPTMEEVWSLC 278          
BLAST of mRNA_P-wetherbeei_contig5230.1.1 vs. uniprot
Match: A0A7R9UDR5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UDR5_9STRA)

HSP 1 Score: 245 bits (625), Expect = 3.940e-73
Identity = 116/145 (80.00%), Postives = 129/145 (88.97%), Query Frame = 1
Query:    4 NQICAAIRHMHERRIMHRDLKPANIFLTLEGQVKVGDLGLGRAMSENTLEAHSKVGTPLYMSPEVLRGDGYDWKSDIWSLGCLLYELAMLRSPFKSEGLNLYSLFQKISKGDYAPLPEHYSEQLKDLAYRMISTDAADRPGIDEV 438
            +QI  AI HMH RRIMHRDLKPANIFLTL GQVKVGDLGLGRAMSE+T+EAHSKVGTPLYMSPEVLRG GYDWKSDIWSLGCLLYELAML+SPFKSEGLNLYSLFQKIS+GDY PLP+ YS +L+ L   MI TD ++RP I+++
Sbjct:  127 SQIAEAIEHMHSRRIMHRDLKPANIFLTLSGQVKVGDLGLGRAMSEHTMEAHSKVGTPLYMSPEVLRGGGYDWKSDIWSLGCLLYELAMLKSPFKSEGLNLYSLFQKISRGDYLPLPDRYSNELRSLVDAMIQTDPSERPDIEQI 271          
BLAST of mRNA_P-wetherbeei_contig5230.1.1 vs. uniprot
Match: A0A7S1GED1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GED1_9STRA)

HSP 1 Score: 230 bits (587), Expect = 6.390e-73
Identity = 108/145 (74.48%), Postives = 125/145 (86.21%), Query Frame = 1
Query:    4 NQICAAIRHMHERRIMHRDLKPANIFLTLEGQVKVGDLGLGRAMSENTLEAHSKVGTPLYMSPEVLRGDGYDWKSDIWSLGCLLYELAMLRSPFKSEGLNLYSLFQKISKGDYAPLPEHYSEQLKDLAYRMISTDAADRPGIDEV 438
            +QI  A+RHMHERR+MHRDLKPAN+FLTL G VKVGDLGLGR  SE T+EA+SKVGTPLYMSPEVLRG GY+WKSD+WSLGC+LYELAML SPFK EGLNLY LFQKI+KGDYAP+   YS +L+DLA+RM+S D   RP ++EV
Sbjct:  142 SQIAEALRHMHERRVMHRDLKPANVFLTLNGTVKVGDLGLGRHFSEATMEAYSKVGTPLYMSPEVLRGKGYEWKSDVWSLGCVLYELAMLTSPFKEEGLNLYGLFQKITKGDYAPVSSVYSPELRDLAHRMLSVDPDGRPDMEEV 286          
BLAST of mRNA_P-wetherbeei_contig5230.1.1 vs. uniprot
Match: A0A8J2WWI5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WWI5_9STRA)

HSP 1 Score: 243 bits (619), Expect = 6.980e-73
Identity = 113/145 (77.93%), Postives = 128/145 (88.28%), Query Frame = 1
Query:    4 NQICAAIRHMHERRIMHRDLKPANIFLTLEGQVKVGDLGLGRAMSENTLEAHSKVGTPLYMSPEVLRGDGYDWKSDIWSLGCLLYELAMLRSPFKSEGLNLYSLFQKISKGDYAPLPEHYSEQLKDLAYRMISTDAADRPGIDEV 438
            +QIC AI HMH RRI+HRDLKPAN+FLTL+G VKVGDLGLGR MSE+T EAHSKVGTPLYMSPEVLRGDGYDWKSD+WSLGC+LYELA+L+SPFK+EGL+LYSLFQKISKGDYAP PEHYS  L++L   M+S DA DRP +  V
Sbjct:  113 SQICDAITHMHSRRILHRDLKPANVFLTLDGTVKVGDLGLGRMMSEHTFEAHSKVGTPLYMSPEVLRGDGYDWKSDVWSLGCVLYELAVLKSPFKAEGLDLYSLFQKISKGDYAPPPEHYSSTLRELCVSMLSVDAKDRPDVAHV 257          
BLAST of mRNA_P-wetherbeei_contig5230.1.1 vs. uniprot
Match: A0A8K1CJK0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CJK0_PYTOL)

HSP 1 Score: 240 bits (612), Expect = 1.250e-72
Identity = 113/148 (76.35%), Postives = 128/148 (86.49%), Query Frame = 1
Query:    7 QICAAIRHMHERRIMHRDLKPANIFLTLEGQVKVGDLGLGRAMSENTLEAHSKVGTPLYMSPEVLRGDGYDWKSDIWSLGCLLYELAMLRSPFKSEGLNLYSLFQKISKGDYAPLPEHYSEQLKDLAYRMISTDAADRPGIDEVGRLC 450
            Q+CAAI H+H  RIMHRDLKPANIFLTL+G+VKVGDLGLGR +SENTLEAHSKVGTPLYMSPEVLRG+GYDWKSD+WSLGC+LYELAM+RSPFKSEGLNLY LFQKISKGDY P+   YSE L+ L  RM S  A++RP ++EV   C
Sbjct:  129 QLCAAILHLHRARIMHRDLKPANIFLTLQGEVKVGDLGLGRHLSENTLEAHSKVGTPLYMSPEVLRGEGYDWKSDVWSLGCILYELAMMRSPFKSEGLNLYGLFQKISKGDYEPVSSVYSEHLRRLVTRMTSLSASERPTMEEVWNAC 276          
BLAST of mRNA_P-wetherbeei_contig5230.1.1 vs. uniprot
Match: A0A812TRW5_9DINO (Nekl-3 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812TRW5_9DINO)

HSP 1 Score: 223 bits (567), Expect = 1.550e-70
Identity = 108/152 (71.05%), Postives = 125/152 (82.24%), Query Frame = 1
Query:    4 NQICAAIRHMHERRIMHRDLKPANIFLTLEGQVKVGDLGLGRAMSENTLEAHSKVGTPLYMSPEVLRGDGYDWKSDIWSLGCLLYELAMLRSPFKSEGLNLYSLFQKISKGDYAPLPEHYSEQLKDLAYRMISTDAADRPGIDEVGRLCCLL 459
            +Q+ AA+ HMHER +MHRDLKPANIFLTL G VKVGDLGLGR +SE+TLEA SKVGTPLYMSPEVL+G GYD+KSD+WSLGC+LYELAML SPFK EGLNLY LFQKISKG Y  +   YS +L+DL  RM+S+D A RP + EV R+ C L
Sbjct:   74 SQVAAAVAHMHERHVMHRDLKPANIFLTLNGTVKVGDLGLGRYLSEHTLEAFSKVGTPLYMSPEVLQGKGYDYKSDVWSLGCVLYELAMLISPFKEEGLNLYGLFQKISKGTYPGISTLYSTELQDLVARMLSSDPAARPDMGEVTRISCAL 225          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5230.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZIF0_9STRA4.650e-8375.46Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A7S1TSS1_9STRA3.530e-8082.31Hypothetical protein (Fragment) n=2 Tax=Phaeomonas... [more]
A0A7S2C573_9STRA9.030e-7879.86Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
F0Y2C1_AURAN2.250e-7778.87Protein kinase domain-containing protein (Fragment... [more]
K3WH02_GLOUD6.960e-7479.05Protein kinase domain-containing protein n=1 Tax=G... [more]
A0A7R9UDR5_9STRA3.940e-7380.00Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1GED1_9STRA6.390e-7374.48Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A8J2WWI5_9STRA6.980e-7377.93Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A8K1CJK0_PYTOL1.250e-7276.35Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A812TRW5_9DINO1.550e-7071.05Nekl-3 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5230contigP-wetherbeei_contig5230:234..1213 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog65071.PYU1_T004243
PFAMsIFT57,Pkinase
Model size462
Max annot lvl121069|Pythiales
Hectar predicted targeting categoryother localisation
Exons3
Evalue1.14e-74
EggNOG OGsKOG0591@1|root,KOG0591@2759|Eukaryota,1MAUU@121069|Pythiales
DescriptionProtein kinase domain containing protein. Source PGD
Cds size462
COG categoryT
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186784.1165907-CDS-P-wetherbeei_contig5230:233..3981683186784.1165907-CDS-P-wetherbeei_contig5230:233..398Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5230 234..398 +
1683186784.1290011-CDS-P-wetherbeei_contig5230:730..8981683186784.1290011-CDS-P-wetherbeei_contig5230:730..898Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5230 731..898 +
1683186784.1372473-CDS-P-wetherbeei_contig5230:1084..12131683186784.1372473-CDS-P-wetherbeei_contig5230:1084..1213Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5230 1085..1213 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5230.1.1prot_P-wetherbeei_contig5230.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5230 234..1213 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5230.1.1

>prot_P-wetherbeei_contig5230.1.1 ID=prot_P-wetherbeei_contig5230.1.1|Name=mRNA_P-wetherbeei_contig5230.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=154bp
MNQICAAIRHMHERRIMHRDLKPANIFLTLEGQVKVGDLGLGRAMSENTL
EAHSKVGTPLYMSPEVLRGDGYDWKSDIWSLGCLLYELAMLRSPFKSEGL
NLYSLFQKISKGDYAPLPEHYSEQLKDLAYRMISTDAADRPGIDEVGRLC
CLL*
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mRNA from alignment at P-wetherbeei_contig5230:234..1213+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5230.1.1 ID=mRNA_P-wetherbeei_contig5230.1.1|Name=mRNA_P-wetherbeei_contig5230.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=980bp|location=Sequence derived from alignment at P-wetherbeei_contig5230:234..1213+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAATCAGATCTGCGCGGCGATCCGGCACATGCACGAGCGGCGCATCAT GCACCGTGACCTCAAGCCAGCCAACATCTTCCTGACGCTCGAGGGGCAGG TCAAGGTCGGCGACCTCGGCCTCGGCCGTGCCATGAGCGAGAACACCCTC GAGGCACACTCCAAGGTACAGTAGGTTGCAGCCGGTTACAATCAGTTGCA GGGTAGTTGCTGCCCAATCAAGTCGATGGAGGCGGGGGAGGCGGAACTTC TCGATTTGTTAAGTTTTCATGTCATCTAGGTTACTGGCGTCGGCAAGCTG TCCAGACTTTGAATGGCGGCTTTGGTGATGCAACGTGCTTTTACAACTTC CGTTCCTGTCATCTTGCTCCTTGTACTGCCTCCATGTCGTTCCTTTCCTG CGGCCGCCTCCACCGCGGCCGCCACCCGTGCTGTCGTGCCGATCGGCCCG CCGGACTGCCTGGTCTGGCCGACCTGGCCGGGACGGGTGGATCGCAGGTG GGCACGCCGCTGTACATGTCGCCGGAGGTACTGCGGGGGGACGGCTACGA CTGGAAGAGCGACATCTGGAGCCTCGGCTGCCTTCTCTACGAGCTCGCCA TGCTGCGCAGCCCCTTCAAGTCCGAAGGGCTCAACCTCTACAGCCTTTTC CAGAAGATCAGCAAGGTACTGGAGATGGGTGATACGTTCACTATGCTATG GTGGCGAAGGAATGCAGGACGAACAGGAGGGGCTGTTGCCCATTGCTTGT TTAAGGTTATAAAGCTGGCAGCCCCCCGTCGACTTCCGAATGAGTGACAG AGATCAAGTGATGGGGGCCGCCTTTCGTGTCGCGTTCGAATTTCTTTATA GGGCGACTACGCACCGCTGCCGGAGCACTATTCGGAGCAGCTGAAGGATC TCGCCTACCGGATGATCTCCACCGACGCTGCCGACCGCCCCGGAATCGAC GAGGTGGGTCGCCTCTGCTGTCTTCTCTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5230:234..1213+

>mRNA_P-wetherbeei_contig5230.1.1 ID=mRNA_P-wetherbeei_contig5230.1.1|Name=mRNA_P-wetherbeei_contig5230.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=462bp|location=Sequence derived from alignment at P-wetherbeei_contig5230:234..1213+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAATCAGATCTGCGCGGCGATCCGGCACATGCACGAGCGGCGCATCAT
GCACCGTGACCTCAAGCCAGCCAACATCTTCCTGACGCTCGAGGGGCAGG
TCAAGGTCGGCGACCTCGGCCTCGGCCGTGCCATGAGCGAGAACACCCTC
GAGGCACACTCCAAGGTGGGCACGCCGCTGTACATGTCGCCGGAGGTACT
GCGGGGGGACGGCTACGACTGGAAGAGCGACATCTGGAGCCTCGGCTGCC
TTCTCTACGAGCTCGCCATGCTGCGCAGCCCCTTCAAGTCCGAAGGGCTC
AACCTCTACAGCCTTTTCCAGAAGATCAGCAAGGGCGACTACGCACCGCT
GCCGGAGCACTATTCGGAGCAGCTGAAGGATCTCGCCTACCGGATGATCT
CCACCGACGCTGCCGACCGCCCCGGAATCGACGAGGTGGGTCGCCTCTGC
TGTCTTCTCTAA
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