mRNA_P-wetherbeei_contig522.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig522.1.1 vs. uniprot
Match: A0A835ZA69_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA69_9STRA) HSP 1 Score: 221 bits (563), Expect = 1.510e-62 Identity = 128/254 (50.39%), Postives = 162/254 (63.78%), Query Frame = 1
Query: 7 AFFSTMLVLYLW-----------GFGAV----IAAASSSSM---SSMMWSVRPLTDAVLEGVAGAWLNVPNTTVTVRLDNEATVLASYEMIVTAARPQTPGSPFLTAG-QNNGGGRDVLQVRLVVNGVPYRQSASHVAPSTPYESFIGAVSGHAVVALGRGEHGVSLQWKRPA--GGAVTSWSNRPSDADGHNSGRSVVVTARHRYMWHASAVTDARTAAALGVWEDVPEGSLSFVLPEPASLRALYCMSVRPD 705
AF S + LY W G GA I S++S+ + +MWS RPLT+AVL AG W++VP+T+V V L NEATVL SY M++ A++ PGS FL++ Q NGG RDVLQ R+ V+G P+RQSA+H +PS+PYE+F+ V GH V +LG G H V+LQWKR A G VTSW P+ G ++ RS+ VTA+HRYMWHA DAR AA G W VPE L F L EPA+LR LY + VRPD
Sbjct: 11 AFASCLAALYAWLLLCRAAAQQRGAGAEAQSRIVCLSTTSIPHRAGLMWSARPLTNAVLTE-AGRWVDVPDTSVAVSLANEATVLVSYYMVLRASQAAAPGSAFLSSALQQNGGVRDVLQTRVTVDGAPFRQSAAHASPSSPYETFVDTVGGHLVASLGAGNHTVALQWKRAAAAGAGVTSWGTGPAHGAGADASRSLAVTAQHRYMWHAEGAADARLDAA-GAWSAVPEMELKFRLAEPATLRILYSLVVRPD 262
BLAST of mRNA_P-wetherbeei_contig522.1.1 vs. uniprot
Match: D7FQT8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQT8_ECTSI) HSP 1 Score: 212 bits (540), Expect = 1.840e-59 Identity = 104/204 (50.98%), Postives = 140/204 (68.63%), Query Frame = 1
Query: 94 MWSVRPLTDAVLEGVAGAWLNVPNTTVTVRLDNEATVLASYEMIVTAARPQTPGSPFLTAGQNNGGGRDVLQVRLVVNGVPYRQSASHVAPSTPYESFIGAVSGHAVVALGRGEHGVSLQWKRPAGGAVTSWSNRPSDADGHNSGRSVVVTARHRYMWHASAVTDARTAAALGVWEDVPEGSLSFVLPEPASLRALYCMSVRPD 705
MWS RPLT LE +G W++VP+T + + L++E T L SY ++V AA+PQ PGS FL +++GG +D LQ+RLVVNG+P RQSA+ +P+ PYES++ + GH + G+G H V LQWK+ +GG VTSWSNRPS DG GRS+VV+A+HRYMW+++ D G W ++P L LPEPAS+R LY MSV PD
Sbjct: 1 MWSSRPLTACRLEE-SGVWVDVPDTQLELVLESEVTSLISYSIVVVAAKPQLPGSSFLGEQRSSGGSKDFLQMRLVVNGLPMRQSAAFTSPAGPYESYVDTLGGHLSMEFGQGNHSVGLQWKKSSGGIVTSWSNRPSSHDGFAGGRSIVVSAQHRYMWYSAESNDDVQIDQTGTWNEIPGLRLQLELPEPASIRVLYSMSVMPD 203
BLAST of mRNA_P-wetherbeei_contig522.1.1 vs. uniprot
Match: A0A2R5GCE8_9STRA (Hepatocyte growth factor receptor n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GCE8_9STRA) HSP 1 Score: 145 bits (366), Expect = 3.870e-36 Identity = 83/208 (39.90%), Postives = 121/208 (58.17%), Query Frame = 1
Query: 85 SSMMWSVRPLTDAVL-EGVAGAWLNVPNTTVTVRLDNEATVLASYEMIVTAARPQTPGSPFLTAGQNNGGGRDVLQVRLVVNGVPYRQSASHVAPSTPYESFIGAVSGHAVVALGRGEHGVSLQWKRPAGGAVTSWSNRPSDADGHNSGRSVVVTARHRYMWHASAVTDARTAAALGVWEDVPEGSLSFVLPEPASLRALYCMSVRPD 705
+ ++WSV P + A L + A W V NTTV+ LD E TV +Y V A + PG+ L +++ DVL +R+V++GVP+RQS SH P + +E ++ GHAV LG GEH +L+W+R G V +WS RP+ G RSV V ARH++ + A +T AR ++A W DVP+ ++SF LP ++ LY + VRP
Sbjct: 104 NGLLWSVEPTSSAFLGQDAAPEWQAVENTTVSFLLDKEYTVRVTYTANVIADKAYEPGADALGWSEDD----DVLGMRIVIDGVPFRQSGSHANPLSSFEQNRASLMGHAVANLGPGEHTATLEWRR-WGSRVRTWSIRPTLLRGQGGSRSVTVKARHKFFYMAQPLTGARISSASDDWVDVPDCTISFTLPREWTMHLLYAIQVRPQ 306
BLAST of mRNA_P-wetherbeei_contig522.1.1 vs. uniprot
Match: A0A8J5J4H1_9STRA (IPT/TIG domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5J4H1_9STRA) HSP 1 Score: 133 bits (334), Expect = 1.310e-33 Identity = 83/235 (35.32%), Postives = 125/235 (53.19%), Query Frame = 1
Query: 1 QPAFFSTMLVLYLWGFGAVIAAASSSSMSSMMWSVRPLTDAVLEGVAGAWLNVPNTTVTVRLDNEATVLASYEMIVTAARPQTPGSPFLTAGQNNGGGRDVLQVRLVVNGVPYRQSASHVAPSTPYESFIGAVSGHAVVALGRGEHGVSLQWKRPAGGAVTSWSNRPSDADGHNSGRSVVVTARHRYMWHASAVTDARTAAALGVWEDVPEGSLSFVLPEPASLRALYCMSVRPD 705
+P + +L LW + A+ S+ +MW PLT AVLE W++VP+T+V V+L NEA V+ SY++ VT P ++ L R+ V+G PYRQSA+ V P + SG V+ + RG H V LQW++ G V W+ DG GRS+ V+A+HR++W+ +T A + +L WE VP +++F L EPA++R Y + VRP+
Sbjct: 5 EPTCHVLLALLTLWLPWIITLIAAQSAAPKLMWCASPLTPAVLESPIDTWVDVPDTSVAVKLQNEAVVMISYDVSVTHVTDVQPEGVQVSELSE-------LSFRIAVDGTPYRQSATTVDDREP---IVVVASGFLVLEIPRGHHLVKLQWRK-RGTHVLKWAVASDILDGFAGGRSLTVSAQHRFIWYKQPIT-AVSLLSLNKWEAVPGMAVNFRLSEPATIRFFYQLPVRPE 227
BLAST of mRNA_P-wetherbeei_contig522.1.1 vs. uniprot
Match: A0A0W8DQ85_PHYNI (Phosphatidylinositol 4-kinase gamma 5 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DQ85_PHYNI) HSP 1 Score: 129 bits (324), Expect = 4.850e-33 Identity = 79/236 (33.47%), Postives = 124/236 (52.54%), Query Frame = 1
Query: 1 QPAFFSTMLVLYLWGFGAVIAAASSSSMSSMMWSVRPLTDAVLEGVAGAWLNVPNTTVTVRLDNEATVLASYEMIVTAARP-QTPGSPFLTAGQNNGGGRDVLQVRLVVNGVPYRQSASHVAPSTPYESFIGAVSGHAVVALGRGEHGVSLQWKRPAGGAVTSWSNRPSDADGHNSGRSVVVTARHRYMWHASAVTDARTAAALGVWEDVPEGSLSFVLPEPASLRALYCMSVRPD 705
+P+ ++L LW + A+ S+ +MW PLT AV+E W++VP+T+V + L NEA V+ SY++ V+ Q+ G P + L R+ V+ PYRQSA+ V P + SG V+ + G H V LQW++ G V W+ DG GRS+ V+A+HR++W+ +T A + ++ WE VP +++F L EPA+ R Y + VRP+
Sbjct: 6 EPSLHLLRVMLVLWLSWVISIIAAQSASPKLMWCASPLTPAVIESPIDKWVDVPDTSVAMELQNEAVVMVSYDVSVSHVTDMQSEGVPVTELSE--------LSFRIAVDNTPYRQSATTVDDREP---LVVVASGFLVLEIPHGHHNVKLQWRK-RGTHVLKWAVSSDILDGFAGGRSLTVSAQHRFIWYKQPIT-AVSLLSVNKWEAVPGMAINFRLSEPATFRFFYQLPVRPE 228
BLAST of mRNA_P-wetherbeei_contig522.1.1 vs. uniprot
Match: A0A329S4G1_9STRA (Cadherin domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329S4G1_9STRA) HSP 1 Score: 133 bits (334), Expect = 6.620e-32 Identity = 83/235 (35.32%), Postives = 126/235 (53.62%), Query Frame = 1
Query: 1 QPAFFSTMLVLYLWGFGAVIAAASSSSMSSMMWSVRPLTDAVLEGVAGAWLNVPNTTVTVRLDNEATVLASYEMIVTAARPQTPGSPFLTAGQNNGGGRDVLQVRLVVNGVPYRQSASHVAPSTPYESFIGAVSGHAVVALGRGEHGVSLQWKRPAGGAVTSWSNRPSDADGHNSGRSVVVTARHRYMWHASAVTDARTAAALGVWEDVPEGSLSFVLPEPASLRALYCMSVRPD 705
+P + +L LW + A+ S+ +MW PLT AVLE W++VP+T+V V+L NEA V+ SY++ VT P ++ + L R+ V+G PYRQSA+ V P + SG V+ + RG H V LQW++ G V W+ DG GRS+ V+A+HR++W+ +T A + +L WE VP +++F L EPA++R Y + VRP+
Sbjct: 5 EPTCHVLLALLTLWLPWIITLIAAQSAAPKLMWCASPLTPAVLESPIDTWVDVPDTSVAVKLQNEAVVMISYDVSVTHITDVQPEGVQVSE-------LNELSFRIAVDGTPYRQSATTVDDREP---IVVVASGFLVLEIPRGHHLVKLQWRK-RGTHVLKWAVASDILDGFAGGRSLTVSAQHRFIWYKQPIT-AVSLLSLNKWEAVPGMAVNFRLSEPATIRFFYQLPVRPE 227
BLAST of mRNA_P-wetherbeei_contig522.1.1 vs. uniprot
Match: H3GCM3_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GCM3_PHYRM) HSP 1 Score: 125 bits (314), Expect = 1.020e-31 Identity = 81/227 (35.68%), Postives = 119/227 (52.42%), Query Frame = 1
Query: 25 LVLYLWGFGAVIAAASSSSMSSMMWSVRPLTDAVLEGVAGAWLNVPNTTVTVRLDNEATVLASYEMIVTAARPQTPGSPFLTAGQNNGGGRDVLQVRLVVNGVPYRQSASHVAPSTPYESFIGAVSGHAVVALGRGEHGVSLQWKRPAGGAVTSWSNRPSDADGHNSGRSVVVTARHRYMWHASAVTDARTAAALGVWEDVPEGSLSFVLPEPASLRALYCMSVRPD 705
L+L LW A + S+ +MW PLT A LE +W++V +T V + L NEA V+ SY++ V+ P + L R+ V+G PYRQSA+ V P + SG+ V+ L RG H V LQW++ G V W+ DG GRS++V+A+HRY+WH +T A + ++ WE VP ++SF L E A++R Y + VRP+
Sbjct: 13 LLLTLW------TADAQSASPKLMWCASPLTPASLESPMDSWMDVLDTKVAMELLNEAVVMISYDVSVSHVTDAKPEGVRVAQVSE-------LSFRVAVDGSPYRQSATTVDDREP---LVATASGYLVLELPRGHHEVKLQWRK-RGTHVLKWALASDILDGFAGGRSLIVSAQHRYLWHTQPIT-ALSLLSVNKWEAVPGMAVSFRLSEAATMRFFYQLPVRPE 221
BLAST of mRNA_P-wetherbeei_contig522.1.1 vs. uniprot
Match: W2LFM4_PHYPR (Cadherin domain-containing protein n=3 Tax=Phytophthora parasitica TaxID=4792 RepID=W2LFM4_PHYPR) HSP 1 Score: 129 bits (324), Expect = 1.380e-30 Identity = 79/236 (33.47%), Postives = 124/236 (52.54%), Query Frame = 1
Query: 1 QPAFFSTMLVLYLWGFGAVIAAASSSSMSSMMWSVRPLTDAVLEGVAGAWLNVPNTTVTVRLDNEATVLASYEMIVTAARP-QTPGSPFLTAGQNNGGGRDVLQVRLVVNGVPYRQSASHVAPSTPYESFIGAVSGHAVVALGRGEHGVSLQWKRPAGGAVTSWSNRPSDADGHNSGRSVVVTARHRYMWHASAVTDARTAAALGVWEDVPEGSLSFVLPEPASLRALYCMSVRPD 705
+P+ ++L LW + A+ S+ +MW PLT AV+E W++VP+T+V + L NEA V+ SY++ V+ Q+ G P + L R+ V+ PYRQSA+ V P + SG V+ + G H V LQW++ G V W+ DG GRS+ V+A+HR++W+ +T A + ++ WE VP +++F L EPA+ R Y + VRP+
Sbjct: 7 EPSLHLLRVMLVLWLSWVISIIAAQSASPKLMWCASPLTPAVIESPIDKWVDVPDTSVAMELQNEAVVMVSYDVSVSHVTDMQSEGVPVTELSE--------LSFRIAVDNTPYRQSATTVDDREP---LVVVASGFLVLEIPHGHHNVKLQWRK-RGTHVLKWAVSSDILDGFAGGRSLTVSAQHRFIWYKQPIT-AVSLLSVNKWEAVPGMAINFRLSEPATFRFFYQLPVRPE 229
BLAST of mRNA_P-wetherbeei_contig522.1.1 vs. uniprot
Match: W2NNW0_PHYPR (Cadherin domain-containing protein n=3 Tax=Phytophthora parasitica TaxID=4792 RepID=W2NNW0_PHYPR) HSP 1 Score: 129 bits (324), Expect = 1.570e-30 Identity = 79/236 (33.47%), Postives = 124/236 (52.54%), Query Frame = 1
Query: 1 QPAFFSTMLVLYLWGFGAVIAAASSSSMSSMMWSVRPLTDAVLEGVAGAWLNVPNTTVTVRLDNEATVLASYEMIVTAARP-QTPGSPFLTAGQNNGGGRDVLQVRLVVNGVPYRQSASHVAPSTPYESFIGAVSGHAVVALGRGEHGVSLQWKRPAGGAVTSWSNRPSDADGHNSGRSVVVTARHRYMWHASAVTDARTAAALGVWEDVPEGSLSFVLPEPASLRALYCMSVRPD 705
+P+ ++L LW + A+ S+ +MW PLT AV+E W++VP+T+V + L NEA V+ SY++ V+ Q+ G P + L R+ V+ PYRQSA+ V P + SG V+ + G H V LQW++ G V W+ DG GRS+ V+A+HR++W+ +T A + ++ WE VP +++F L EPA+ R Y + VRP+
Sbjct: 7 EPSLHLLRVMLVLWLSWVISIIAAQSASPKLMWCASPLTPAVIESPIDKWVDVPDTSVAMELQNEAVVMVSYDVSVSHVTDMQSEGVPVTELSE--------LSFRIAVDNTPYRQSATTVDDREP---LVVVASGFLVLEIPHGHHNVKLQWRK-RGTHVLKWAVSSDILDGFAGGRSLTVSAQHRFIWYKQPIT-AVSLLSVNKWEAVPGMAINFRLSEPATFRFFYQLPVRPE 229
BLAST of mRNA_P-wetherbeei_contig522.1.1 vs. uniprot
Match: W2RC48_PHYPN (Cadherin domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=W2RC48_PHYPN) HSP 1 Score: 129 bits (324), Expect = 1.590e-30 Identity = 79/236 (33.47%), Postives = 124/236 (52.54%), Query Frame = 1
Query: 1 QPAFFSTMLVLYLWGFGAVIAAASSSSMSSMMWSVRPLTDAVLEGVAGAWLNVPNTTVTVRLDNEATVLASYEMIVTAARP-QTPGSPFLTAGQNNGGGRDVLQVRLVVNGVPYRQSASHVAPSTPYESFIGAVSGHAVVALGRGEHGVSLQWKRPAGGAVTSWSNRPSDADGHNSGRSVVVTARHRYMWHASAVTDARTAAALGVWEDVPEGSLSFVLPEPASLRALYCMSVRPD 705
+P+ ++L LW + A+ S+ +MW PLT AV+E W++VP+T+V + L NEA V+ SY++ V+ Q+ G P + L R+ V+ PYRQSA+ V P + SG V+ + G H V LQW++ G V W+ DG GRS+ V+A+HR++W+ +T A + ++ WE VP +++F L EPA+ R Y + VRP+
Sbjct: 7 EPSLHLLRVMLVLWLSWVISIIAAQSASPKLMWCASPLTPAVIESPIDKWVDVPDTSVAMELQNEAVVMVSYDVSVSHVTDMQSEGVPVTELSE--------LSFRIAVDNTPYRQSATTVDDREP---LVVVASGFLVLEIPHGHHNVKLQWRK-RGTHVLKWAVSSDILDGFAGGRSLTVSAQHRFIWYKQPIT-AVSLLSVNKWEAVPGMAINFRLSEPATFRFFYQLPVRPE 229 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig522.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig522.1.1 >prot_P-wetherbeei_contig522.1.1 ID=prot_P-wetherbeei_contig522.1.1|Name=mRNA_P-wetherbeei_contig522.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=228bp MLVLYLWGFGAVIAAASSSSMSSMMWSVRPLTDAVLEGVAGAWLNVPNTTback to top mRNA from alignment at P-wetherbeei_contig522:340..1044- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig522.1.1 ID=mRNA_P-wetherbeei_contig522.1.1|Name=mRNA_P-wetherbeei_contig522.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=705bp|location=Sequence derived from alignment at P-wetherbeei_contig522:340..1044- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig522:340..1044- >mRNA_P-wetherbeei_contig522.1.1 ID=mRNA_P-wetherbeei_contig522.1.1|Name=mRNA_P-wetherbeei_contig522.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=684bp|location=Sequence derived from alignment at P-wetherbeei_contig522:340..1044- (Phaeothamnion wetherbeei SAG_119_79)back to top |