prot_P-wetherbeei_contig52160.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig52160.1.1
Unique Name	prot_P-wetherbeei_contig52160.1.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	182

Homology

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BLAST of mRNA_P-wetherbeei_contig52160.1.1 vs. uniprot
Match: A0A6L6AQA0_9ACTN (GAF domain-containing protein n=5 Tax=root TaxID=1 RepID=A0A6L6AQA0_9ACTN)

HSP 1 Score: 303 bits (775), Expect = 8.920e-100
Identity = 154/156 (98.72%), Postives = 155/156 (99.36%), Query Frame = 0

Query:   27 MGDDVGSSHRARDRALTDDTATAARPEISASWRRVRAGGLAPGAEPEVAPLSEAEVVSRRSTSTLAPLLPSITASLEPVVDDGLLMVVTDSDGRVLWRRGRTGVRRLADRLGFVSGSAWTEANVGTNAIGTCLVLGEPVHIRGPEHYVESHTRWSC 182
            MGDDV SSHRARDRALT+DTATAARPEISASWRRVRAGGLAPGAEPEVAPLSEAEVVSRRSTSTLAPLLPSITASLEPVVDDGLLMVVTDSDGRVLWRRGRTGVRRLADRLGFVSGSAWTEANVGTNAIGTCLVLGEPVHIRGPEHYVESHTRWSC
Sbjct:    1 MGDDVRSSHRARDRALTNDTATAARPEISASWRRVRAGGLAPGAEPEVAPLSEAEVVSRRSTSTLAPLLPSITASLEPVVDDGLLMVVTDSDGRVLWRRGRTGVRRLADRLGFVSGSAWTEANVGTNAIGTCLVLGEPVHIRGPEHYVESHTRWSC 156

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BLAST of mRNA_P-wetherbeei_contig52160.1.1 vs. uniprot
Match: A0A4Q2RQ87_9ACTN (GAF domain-containing protein n=2 Tax=Nocardioides glacieisoli TaxID=1168730 RepID=A0A4Q2RQ87_9ACTN)

HSP 1 Score: 270 bits (689), Expect = 2.000e-86
Identity = 139/182 (76.37%), Postives = 151/182 (82.97%), Query Frame = 0

Query:    1 HDTPGRRIGGRVAGGCNAGEARPGGTMGDDVGSSHRARDRALTDDTATAARPEISASWRRVRAGGLAPGAEPEVAPLSEAEVVSRRSTSTLAPLLPSITASLEPVVDDGLLMVVTDSDGRVLWRRGRTGVRRLADRLGFVSGSAWTEANVGTNAIGTCLVLGEPVHIRGPEHYVESHTRWSC 182
            HDTP  RIGGRVA GC     R G  MG D  ++   RD+AL      AARPEISASWRRVRAGGLAPGAEP VAPLSEAE+ +RR++S LAPL+PSITASLEPVVDDGLL+V+TD DGRVLW+RGR GVRRLAD LGFV GSAWTE NVGTNAIGTCLV+GEPVHIRGPEHYVESHTRWSC
Sbjct:   13 HDTPASRIGGRVARGCK----RTGVDMGADARAARPTRDQALAGRPDAAARPEISASWRRVRAGGLAPGAEPAVAPLSEAEIATRRTSSALAPLMPSITASLEPVVDDGLLLVLTDVDGRVLWQRGRAGVRRLADTLGFVPGSAWTEVNVGTNAIGTCLVVGEPVHIRGPEHYVESHTRWSC 190

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BLAST of mRNA_P-wetherbeei_contig52160.1.1 vs. uniprot
Match: A0A4V1RPY0_9ACTN (GAF domain-containing protein n=2 Tax=Nocardioides zhouii TaxID=1168729 RepID=A0A4V1RPY0_9ACTN)

HSP 1 Score: 265 bits (677), Expect = 3.840e-85
Identity = 134/157 (85.35%), Postives = 147/157 (93.63%), Query Frame = 0

Query:   27 MGDDVGSSHRARDRALT-DDTATAARPEISASWRRVRAGGLAPGAEPEVAPLSEAEVVSRRSTSTLAPLLPSITASLEPVVDDGLLMVVTDSDGRVLWRRGRTGVRRLADRLGFVSGSAWTEANVGTNAIGTCLVLGEPVHIRGPEHYVESHTRWSC 182
            MG+DV ++  AR++AL   D+ATAARPEISASWRRVRAGGLAPGAEPEVAPLSE E+ SRR+ S LAPLLPSITASLEPVVDDGLL+VVTD+DGRVLW+RGRTGVRRLADRLGFV+GSAWTEANVGTNAIGTCLV+GEPVHIRGPEHYVESHTRWSC
Sbjct:    1 MGEDVRTARLAREQALGGSDSATAARPEISASWRRVRAGGLAPGAEPEVAPLSEVEIESRRTASELAPLLPSITASLEPVVDDGLLLVVTDTDGRVLWQRGRTGVRRLADRLGFVAGSAWTEANVGTNAIGTCLVVGEPVHIRGPEHYVESHTRWSC 157

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BLAST of mRNA_P-wetherbeei_contig52160.1.1 vs. uniprot
Match: A0A1I1B269_9ACTN (GAF domain-containing protein n=1 Tax=Nocardioides alpinus TaxID=748909 RepID=A0A1I1B269_9ACTN)

HSP 1 Score: 265 bits (676), Expect = 5.270e-85
Identity = 133/156 (85.26%), Postives = 142/156 (91.03%), Query Frame = 0

Query:   27 MGDDVGSSHRARDRALTDDTATAARPEISASWRRVRAGGLAPGAEPEVAPLSEAEVVSRRSTSTLAPLLPSITASLEPVVDDGLLMVVTDSDGRVLWRRGRTGVRRLADRLGFVSGSAWTEANVGTNAIGTCLVLGEPVHIRGPEHYVESHTRWSC 182
            MG+DV +SHRAR+RAL       + PEISASWRRVRAGGLAPGAEPEVAPLSE EV SRR++S LAPLL SITASLEPVVDDGLL+VVTD+DGRVLWRRGRTGVRRLADRLGFV GSAWTEANVGTNAIGTCLV+GEPVHIRGPEHYVESHTRWSC
Sbjct:    1 MGEDVRTSHRARERALATGIPVESSPEISASWRRVRAGGLAPGAEPEVAPLSEVEVESRRTSSALAPLLASITASLEPVVDDGLLLVVTDTDGRVLWRRGRTGVRRLADRLGFVPGSAWTEANVGTNAIGTCLVVGEPVHIRGPEHYVESHTRWSC 156

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BLAST of mRNA_P-wetherbeei_contig52160.1.1 vs. uniprot
Match: UPI000D30759D (GAF domain-containing protein n=1 Tax=Nocardioides sediminis TaxID=433648 RepID=UPI000D30759D)

HSP 1 Score: 246 bits (629), Expect = 7.500e-78
Identity = 129/161 (80.12%), Postives = 139/161 (86.34%), Query Frame = 0

Query:   27 MGDDVGSSHRA----RDRALTDD-TATAARPEISASWRRVRAGGLAPGAEPEVAPLSEAEVVSRRSTSTLAPLLPSITASLEPVVDDGLLMVVTDSDGRVLWRRGRTGVRRLADRLGFVSGSAWTEANVGTNAIGTCLVLGEPVHIRGPEHYVESHTRWSC 182
            MG D G   RA    R+RAL+   TA AARPEISASWRRVRAGGLAPGAEP V PLSE EV +RR++S LAPLLPSIT SL PVVDDGLL+VVTD+DGRVLWRRGR+GV+RLADRLGFV GSAWTEANVGTNAIGTCLV+GEPVHI GPEHYVESHTRWSC
Sbjct:    1 MGRDEGQHERAARLTRERALSGTGTAEAARPEISASWRRVRAGGLAPGAEPAVPPLSEGEVEARRASSALAPLLPSITTSLSPVVDDGLLVVVTDTDGRVLWRRGRSGVQRLADRLGFVRGSAWTEANVGTNAIGTCLVVGEPVHIHGPEHYVESHTRWSC 161

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BLAST of mRNA_P-wetherbeei_contig52160.1.1 vs. uniprot
Match: A0A0Q9Q9D2_9ACTN (GAF domain-containing protein n=2 Tax=Nocardioides TaxID=1839 RepID=A0A0Q9Q9D2_9ACTN)

HSP 1 Score: 246 bits (628), Expect = 1.060e-77
Identity = 128/161 (79.50%), Postives = 138/161 (85.71%), Query Frame = 0

Query:   27 MGDDVGSSHRA----RDRALTDDTATA-ARPEISASWRRVRAGGLAPGAEPEVAPLSEAEVVSRRSTSTLAPLLPSITASLEPVVDDGLLMVVTDSDGRVLWRRGRTGVRRLADRLGFVSGSAWTEANVGTNAIGTCLVLGEPVHIRGPEHYVESHTRWSC 182
            MG+D     RA    R+R L+   AT  ARPEISASWRRVRAGGLAPGAEP VAPL+E EV SRR++S L+PLLPSITASL PVVDDGLL+VVTD+DGRVLWRRGR GVRRLADRLGFV GSAWTEANVGTNAIGTCLV+GEPVHI GPEHYVESHTRWSC
Sbjct:    1 MGEDRRQGERAARLTRERVLSGGAATGVARPEISASWRRVRAGGLAPGAEPAVAPLTEGEVESRRASSALSPLLPSITASLSPVVDDGLLVVVTDTDGRVLWRRGRAGVRRLADRLGFVQGSAWTEANVGTNAIGTCLVVGEPVHIHGPEHYVESHTRWSC 161

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BLAST of mRNA_P-wetherbeei_contig52160.1.1 vs. uniprot
Match: A0A0Q9T466_9ACTN (GAF domain-containing protein n=1 Tax=Nocardioides sp. Soil805 TaxID=1736416 RepID=A0A0Q9T466_9ACTN)

HSP 1 Score: 242 bits (618), Expect = 2.880e-76
Identity = 122/146 (83.56%), Postives = 130/146 (89.04%), Query Frame = 0

Query:   38 RDRALTDDTATA-ARPEISASWRRVRAGGLAPGAEPEVAPLSEAEVVSRRSTSTLAPLLPSITASLEPVVDDGLLMVVTDSDGRVLWRRGRTGVRRLADRLGFVSGSAWTEANVGTNAIGTCLVLGEPVHIRGPEHYVESHTRWSC 182
            RDR L+       ARPEISASWRRVRAGGLAPGAEP VAPLSE EV SRR++S L PLLPSIT+SL PVVDDGLL+VVTD+DGRVLWRRGR+GVRRLADRLGFV GSAWTEANVGTNAIGTCLV+GEPVHI GPEHYVESHTRWSC
Sbjct:   16 RDRVLSGGAPVEEARPEISASWRRVRAGGLAPGAEPAVAPLSEGEVESRRASSALGPLLPSITSSLSPVVDDGLLVVVTDTDGRVLWRRGRSGVRRLADRLGFVQGSAWTEANVGTNAIGTCLVVGEPVHIHGPEHYVESHTRWSC 161

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BLAST of mRNA_P-wetherbeei_contig52160.1.1 vs. uniprot
Match: A0A2R7YUW1_9ACTN (Diguanylate cyclase n=1 Tax=Nocardioides currus TaxID=2133958 RepID=A0A2R7YUW1_9ACTN)

HSP 1 Score: 236 bits (603), Expect = 8.830e-74
Identity = 119/148 (80.41%), Postives = 133/148 (89.86%), Query Frame = 0

Query:   36 RARDRALTDDTATAA-RPEISASWRRVRAGGLAPGAEPEVAPLSEAEVVSRRSTSTLAPLLPSITASLEPVVDDGLLMVVTDSDGRVLWRRGRTGVRRLADRLGFVSGSAWTEANVGTNAIGTCLVLGEPVHIRGPEHYVESHTRWSC 182
            R+RDR L+    +   RPEISASWRRVRAGGLAPGAEPEVAPL+E EV SRRSTS LAPLLPSIT+SL PVVDDGLL+VVTD++GRVLWR+G +GVRRLADRLGFV GSAWTE+NVGTNAIGT LV+GEPVHI+GPEHYV+SHTRWSC
Sbjct:    9 RSRDRVLSGGAPSPGIRPEISASWRRVRAGGLAPGAEPEVAPLTEGEVESRRSTSALAPLLPSITSSLAPVVDDGLLVVVTDTEGRVLWRQGSSGVRRLADRLGFVPGSAWTESNVGTNAIGTSLVVGEPVHIQGPEHYVDSHTRWSC 156

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BLAST of mRNA_P-wetherbeei_contig52160.1.1 vs. uniprot
Match: R7XVY8_9ACTN (Transcriptional regulator n=2 Tax=Nocardioides TaxID=1839 RepID=R7XVY8_9ACTN)

HSP 1 Score: 234 bits (596), Expect = 6.090e-73
Identity = 117/148 (79.05%), Postives = 129/148 (87.16%), Query Frame = 0

Query:   36 RARDRALTDD-TATAARPEISASWRRVRAGGLAPGAEPEVAPLSEAEVVSRRSTSTLAPLLPSITASLEPVVDDGLLMVVTDSDGRVLWRRGRTGVRRLADRLGFVSGSAWTEANVGTNAIGTCLVLGEPVHIRGPEHYVESHTRWSC 182
            RAR+R L+ D +    RPEISASWRRVRA GLAPGAEP VAPL+E+EV SRRSTS + PLLP IT SL P VDDGLL+VVTD+DGRVLWRRG +GVRRLAD LGFV GSAWTEANVGTNAIGTCLVLG+PVHI+GPEHYV+SHTRWSC
Sbjct:    9 RARERVLSGDGSPQEVRPEISASWRRVRASGLAPGAEPAVAPLTESEVESRRSTSAMVPLLPGITGSLSPAVDDGLLVVVTDTDGRVLWRRGGSGVRRLADGLGFVPGSAWTEANVGTNAIGTCLVLGQPVHIQGPEHYVQSHTRWSC 156

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BLAST of mRNA_P-wetherbeei_contig52160.1.1 vs. uniprot
Match: A0A0K1JHW9_9MICO (GAF domain-containing protein n=1 Tax=Luteipulveratus mongoliensis TaxID=571913 RepID=A0A0K1JHW9_9MICO)

HSP 1 Score: 201 bits (511), Expect = 4.200e-60
Identity = 100/156 (64.10%), Postives = 120/156 (76.92%), Query Frame = 0

Query:   27 MGDDVGSSHRARDRALTDDTATAARPEISASWRRVRAGGLAPGAEPEVAPLSEAEVVSRRSTSTLAPLLPSITASLEPVVDDGLLMVVTDSDGRVLWRRGRTGVRRLADRLGFVSGSAWTEANVGTNAIGTCLVLGEPVHIRGPEHYVESHTRWSC 182
            M D   +  R R+R L+     AARPEI+ASWRR+RA GL PG+ PEVAPL  +++  RR+TS L PLLP +T++L+ VVD G L+V+TD +GRVLWR+G + VRR ADRLGFVSGSAWTE NVGTNAIGTCLVL  PV IRG EHYVESHT+W C
Sbjct:    1 MDDQDRAQRRTRERVLSGGHGAAARPEIAASWRRLRASGLDPGSNPEVAPLDRSDIEERRTTSGLLPLLPHLTSALKSVVDAGQLVVITDREGRVLWRQGGSQVRRFADRLGFVSGSAWTEGNVGTNAIGTCLVLNAPVQIRGGEHYVESHTQWGC 156

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig52160.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig52160.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6L6AQA0_9ACTN	8.920e-100	98.72	GAF domain-containing protein n=5 Tax=root TaxID=1...	[more]
A0A4Q2RQ87_9ACTN	2.000e-86	76.37	GAF domain-containing protein n=2 Tax=Nocardioides...	[more]
A0A4V1RPY0_9ACTN	3.840e-85	85.35	GAF domain-containing protein n=2 Tax=Nocardioides...	[more]
A0A1I1B269_9ACTN	5.270e-85	85.26	GAF domain-containing protein n=1 Tax=Nocardioides...	[more]
UPI000D30759D	7.500e-78	80.12	GAF domain-containing protein n=1 Tax=Nocardioides...	[more]
A0A0Q9Q9D2_9ACTN	1.060e-77	79.50	GAF domain-containing protein n=2 Tax=Nocardioides...	[more]
A0A0Q9T466_9ACTN	2.880e-76	83.56	GAF domain-containing protein n=1 Tax=Nocardioides...	[more]
A0A2R7YUW1_9ACTN	8.830e-74	80.41	Diguanylate cyclase n=1 Tax=Nocardioides currus Ta...	[more]
R7XVY8_9ACTN	6.090e-73	79.05	Transcriptional regulator n=2 Tax=Nocardioides Tax...	[more]
A0A0K1JHW9_9MICO	4.200e-60	64.10	GAF domain-containing protein n=1 Tax=Luteipulvera...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029016	GAF-like domain superfamily	GENE3D	3.30.450.40		coord: 41..182 e-value: 4.0E-35 score: 123.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..46

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig52160	contig	P-wetherbeei_contig52160:2..547 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig52160.1.1	mRNA_P-wetherbeei_contig52160.1.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig52160 2..547 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig52160.1.1 ID=prot_P-wetherbeei_contig52160.1.1|Name=mRNA_P-wetherbeei_contig52160.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=182bp
HDTPGRRIGGRVAGGCNAGEARPGGTMGDDVGSSHRARDRALTDDTATAA
RPEISASWRRVRAGGLAPGAEPEVAPLSEAEVVSRRSTSTLAPLLPSITA
SLEPVVDDGLLMVVTDSDGRVLWRRGRTGVRRLADRLGFVSGSAWTEANV
GTNAIGTCLVLGEPVHIRGPEHYVESHTRWSC

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR029016	GAF-like_dom_sf