mRNA_P-wetherbeei_contig5215.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5215.1.1 vs. uniprot
Match: A0A7S2S0E2_9STRA (Vacuolar protein sorting-associated protein 51 homolog n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S0E2_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 2.550e-10 Identity = 37/97 (38.14%), Postives = 63/97 (64.95%), Query Frame = 1
Query: 580 AQRNLQLDVDRIFASEVSVFGGVRFTGDSIVGGVLKVVLKAMCECCRLCTLAGGAFRQMQADVEFLHQVLPIYVTDGAALSMLGNMLDQVVIAAETR 870
A + LQLD++R+F+ V VFG V F+ SI+ G+ K+ LKA+CE R ++ A++Q+ ADV+F+ Q+ +V D S++ ++D+ ++AA R
Sbjct: 759 AHKGLQLDIERVFSERVQVFGEVGFSLTSILEGLAKIALKAICEQVRASWISPEAYQQLLADVQFVRQISCCFVDDA---SVIDGLVDETLVAAADR 852
BLAST of mRNA_P-wetherbeei_contig5215.1.1 vs. uniprot
Match: A0A6P6YED2_DERPT (Vacuolar protein sorting-associated protein 51 homolog n=1 Tax=Dermatophagoides pteronyssinus TaxID=6956 RepID=A0A6P6YED2_DERPT) HSP 1 Score: 73.6 bits (179), Expect = 3.240e-10 Identity = 35/109 (32.11%), Postives = 67/109 (61.47%), Query Frame = 1
Query: 589 NLQLDVDRIFASEVSVFGGVRFTGDSIVGGVLKVVLKAMCECCRLCTLAGGAFRQMQADVEFLHQVLPIYVTDGAALSMLGNMLDQVVIAAETRALDPAPLQQRAVADI 915
N+ ++ ++F ++ +FG V F+ SIV G++K+ LK + EC RLCT + F+Q+Q D +L L + +D ++ N++D V+I+++ R LDP +++ + +I
Sbjct: 699 NIVSNIQKLFNDKIEIFGTVEFSKLSIVTGIIKIGLKTLIECVRLCTFSRYGFQQIQVDSYYLQTRLWRFASDE---KIIMNLIDDVIISSKKRCLDPVGMERSVIENI 804
BLAST of mRNA_P-wetherbeei_contig5215.1.1 vs. uniprot
Match: A0A0L9U9H5_PHAAN (Vacuolar protein sorting-associated protein 51 homolog n=1 Tax=Phaseolus angularis TaxID=3914 RepID=A0A0L9U9H5_PHAAN) HSP 1 Score: 70.9 bits (172), Expect = 1.050e-9 Identity = 39/105 (37.14%), Postives = 64/105 (60.95%), Query Frame = 1
Query: 580 AQRNLQLDVDRIFASEVSVFGGVRFTGDSIVGGVLKVVLKAMCECCRLCTLAGGAFRQMQADVEFLHQVLPIYVTDGAALSMLGNMLDQVVIAAETRALDPAPLQ 894
+Q+ L+ + ++F +V +F V +T +S+V ++K+ LK++ E RL T F+Q+Q D++FL L V D AA+ L LD+V++AA R LDP PL+
Sbjct: 245 SQQLLETHLAKLFKQKVEIFTKVEYTQESVVMTIVKLCLKSLQEYARLQTFNRSGFQQIQLDIQFLRTPLKEIVEDEAAMDFL---LDEVIVAAVERCLDPIPLE 346
BLAST of mRNA_P-wetherbeei_contig5215.1.1 vs. uniprot
Match: A0A1U8N993_GOSHI (Vacuolar protein sorting-associated protein 51 homolog n=25 Tax=Gossypium TaxID=3633 RepID=A0A1U8N993_GOSHI) HSP 1 Score: 71.6 bits (174), Expect = 1.310e-9 Identity = 40/116 (34.48%), Postives = 67/116 (57.76%), Query Frame = 1
Query: 592 LQLDVDRIFASEVSVFGGVRFTGDSIVGGVLKVVLKAMCECCRLCTLAGGAFRQMQADVEFLHQVLPIYVTDGAALSMLGNMLDQVVIAAETRALDPAPLQQRAVADIVTRALGRF 939
L+ + ++F +V +F V +T +S+V ++K+ LK++ E RL T F+Q+Q D++FL L V D AA+ L LD+VV+AA R LDP PL+ + ++ L ++
Sbjct: 659 LETHLAKLFKQKVEIFTKVEYTQESVVTTIVKLCLKSLQEFARLQTFNRSGFQQIQLDIQFLRTPLKETVEDEAAIDFL---LDEVVVAASERCLDPIPLEPPILDRLIQAKLAKW 771
BLAST of mRNA_P-wetherbeei_contig5215.1.1 vs. uniprot
Match: A0A8K0GW53_9ROSA (Uncharacterized protein n=1 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0GW53_9ROSA) HSP 1 Score: 71.6 bits (174), Expect = 1.310e-9 Identity = 42/123 (34.15%), Postives = 70/123 (56.91%), Query Frame = 1
Query: 592 LQLDVDRIFASEVSVFGGVRFTGDSIVGGVLKVVLKAMCECCRLCTLAGGAFRQMQADVEFLHQVLPIYVTDGAALSMLGNMLDQVVIAAETRALDPAPLQQRAVADIVTRALGRFS*LISTS 960
L+ + ++F +V +F V FT +S+V V+K+ LK++ E RL T F+Q+Q D++FL + V D AA+ L LD+V++AA R LDP+PL+ + ++ L + +TS
Sbjct: 664 LETHLAKLFKQKVEIFTKVEFTQESVVTMVVKLCLKSLQEFVRLQTFNRSGFQQIQLDIQFLRTPIREAVEDEAAIDFL---LDEVIVAAAERCLDPSPLEPPILEKLIQAKLAKTKEQSTTS 783
BLAST of mRNA_P-wetherbeei_contig5215.1.1 vs. uniprot
Match: A0A4S4EQ94_CAMSI (Vacuolar protein sorting-associated protein 51 homolog n=1 Tax=Camellia sinensis var. sinensis TaxID=542762 RepID=A0A4S4EQ94_CAMSI) HSP 1 Score: 68.6 bits (166), Expect = 1.340e-9 Identity = 39/117 (33.33%), Postives = 66/117 (56.41%), Query Frame = 1
Query: 592 LQLDVDRIFASEVSVFGGVRFTGDSIVGGVLKVVLKAMCECCRLCTLAGGAFRQMQADVEFLHQVLPIYVTDGAALSMLGNMLDQVVIAAETRALDPAPLQQRAVADIVTRALGRFS 942
L+ + ++F ++ +F V T +S+V ++K+ LK++ E RL T F+Q+Q D++FL L V D AA+ L LD+V++AA R LDP PL+ + ++ L + S
Sbjct: 101 LETHLAKLFKQKMEIFTKVEHTQESVVTTIVKLCLKSLQEFVRLQTFNRSGFQQIQLDIQFLRTTLKDTVEDEAAIDFL---LDEVIVAAAERCLDPVPLEIPILDRLIEAKLAKTS 214
BLAST of mRNA_P-wetherbeei_contig5215.1.1 vs. uniprot
Match: A0A7J9A1H4_9ROSI (Vacuolar protein sorting-associated protein 51 homolog n=1 Tax=Gossypium laxum TaxID=34288 RepID=A0A7J9A1H4_9ROSI) HSP 1 Score: 71.2 bits (173), Expect = 1.460e-9 Identity = 39/116 (33.62%), Postives = 67/116 (57.76%), Query Frame = 1
Query: 592 LQLDVDRIFASEVSVFGGVRFTGDSIVGGVLKVVLKAMCECCRLCTLAGGAFRQMQADVEFLHQVLPIYVTDGAALSMLGNMLDQVVIAAETRALDPAPLQQRAVADIVTRALGRF 939
L+ + ++F +V +F V +T +S+V ++K+ LK++ E RL T F+Q+Q D++FL L V D AA+ L LD+V++AA R LDP PL+ + ++ L ++
Sbjct: 473 LETHLAKLFKQKVEIFTKVEYTQESVVTTIVKLCLKSLQEFARLQTFNRSGFQQIQLDIQFLRTPLKETVEDEAAIDFL---LDEVIVAASERCLDPIPLEPPILDRLIQAKLAKW 585
BLAST of mRNA_P-wetherbeei_contig5215.1.1 vs. uniprot
Match: A0A132AE42_SARSC (Vacuolar protein sorting-associated protein 51 homolog n=3 Tax=Sarcoptes scabiei TaxID=52283 RepID=A0A132AE42_SARSC) HSP 1 Score: 71.2 bits (173), Expect = 1.610e-9 Identity = 32/105 (30.48%), Postives = 65/105 (61.90%), Query Frame = 1
Query: 601 DVDRIFASEVSVFGGVRFTGDSIVGGVLKVVLKAMCECCRLCTLAGGAFRQMQADVEFLHQVLPIYVTDGAALSMLGNMLDQVVIAAETRALDPAPLQQRAVADI 915
++ +IF ++ +FG V F+ S+ G++K+ LK + EC RLCT + F+Q+Q D +L L +++D ++ N++D+V+ +++ R LDP +++ + +I
Sbjct: 576 NIQKIFNDKIEIFGSVEFSKLSVATGIIKISLKTLIECVRLCTFSRYGFQQIQVDSYYLQTKLWRFISDE---KIILNLIDEVISSSKKRCLDPIGMERSVIENI 677
BLAST of mRNA_P-wetherbeei_contig5215.1.1 vs. uniprot
Match: A0A6P6V9H9_COFAR (Vacuolar protein sorting-associated protein 51 homolog n=5 Tax=Coffea TaxID=13442 RepID=A0A6P6V9H9_COFAR) HSP 1 Score: 71.2 bits (173), Expect = 1.740e-9 Identity = 42/117 (35.90%), Postives = 65/117 (55.56%), Query Frame = 1
Query: 592 LQLDVDRIFASEVSVFGGVRFTGDSIVGGVLKVVLKAMCECCRLCTLAGGAFRQMQADVEFLHQVLPIYVTDGAALSMLGNMLDQVVIAAETRALDPAPLQQRAVADIVTRALGRFS 942
L+ + ++F +V +F + FT +S+V +LK+ LK++ E RL T F+Q+Q D+EFL L D AA L LD+VV+AA R LDP PL Q + ++ + + S
Sbjct: 666 LETHLAKLFKQKVEIFTKIEFTQESVVTTILKLCLKSLQEFVRLQTFNRRGFQQIQLDIEFLRTTLKDTSEDEAATDFL---LDEVVVAAAERCLDPVPLDQPILDKLIQVKVAKTS 779
BLAST of mRNA_P-wetherbeei_contig5215.1.1 vs. uniprot
Match: A0A3Q0EX39_VIGRR (Vacuolar protein sorting-associated protein 51 homolog n=5 Tax=Vigna TaxID=3913 RepID=A0A3Q0EX39_VIGRR) HSP 1 Score: 70.9 bits (172), Expect = 2.280e-9 Identity = 39/105 (37.14%), Postives = 64/105 (60.95%), Query Frame = 1
Query: 580 AQRNLQLDVDRIFASEVSVFGGVRFTGDSIVGGVLKVVLKAMCECCRLCTLAGGAFRQMQADVEFLHQVLPIYVTDGAALSMLGNMLDQVVIAAETRALDPAPLQ 894
+Q+ L+ + ++F +V +F V +T +S+V ++K+ LK++ E RL T F+Q+Q D++FL L V D AA+ L LD+V++AA R LDP PL+
Sbjct: 641 SQQLLETHLAKLFKQKVEIFTKVEYTQESVVMTIVKLCLKSLQEYARLQTFNRSGFQQIQLDIQFLRTPLKEIVEDEAAMDFL---LDEVIVAAVERCLDPIPLE 742 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5215.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5215.1.1 >prot_P-wetherbeei_contig5215.1.1 ID=prot_P-wetherbeei_contig5215.1.1|Name=mRNA_P-wetherbeei_contig5215.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=218bp MQVLEGVERAASEASAFLGEARVNPIAMGRASAGGMGMGMAGGGGYRRASback to top mRNA from alignment at P-wetherbeei_contig5215:701..2573- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5215.1.1 ID=mRNA_P-wetherbeei_contig5215.1.1|Name=mRNA_P-wetherbeei_contig5215.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1873bp|location=Sequence derived from alignment at P-wetherbeei_contig5215:701..2573- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5215:701..2573- >mRNA_P-wetherbeei_contig5215.1.1 ID=mRNA_P-wetherbeei_contig5215.1.1|Name=mRNA_P-wetherbeei_contig5215.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=654bp|location=Sequence derived from alignment at P-wetherbeei_contig5215:701..2573- (Phaeothamnion wetherbeei SAG_119_79)back to top |