mRNA_P-wetherbeei_contig5213.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5213.5.1
Unique NamemRNA_P-wetherbeei_contig5213.5.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5213.5.1 vs. uniprot
Match: A0A3S0PEV7_9GAMM (Short chain dehydrogenase n=1 Tax=Dyella dinghuensis TaxID=1920169 RepID=A0A3S0PEV7_9GAMM)

HSP 1 Score: 308 bits (790), Expect = 1.690e-104
Identity = 161/208 (77.40%), Postives = 182/208 (87.50%), Query Frame = 1
Query:    7 TEPRKRILVVGASGTLGRAVVAELGARHDIVTAGRSSGDVRLDLTDPKSIEAALAKAGKIDAVISTAGKVTFAPLADFKAAAYGESMHTTGIADKLLGQVNLALAARAHLADGGSVTLTTGILTEQPIAMGSSASLVNGAVEAFVRAAAIELPRGLRINAVSPTVLAESMAGYGPFFRGFEPVTAARAALAFSRSIEGLQTGQVYKVY 630
            +E R RIL+VGASGTLGRAV AEL  RH+++ AGRSSG +R+DLTD +SI   L +AG++DAVIS AG+VTFAPLADFK AA GES+HT GI DKLLGQVNLALAAR HL DGGS+TLTTGIL+EQPI  GSSAS+VNGAVEAFVRAAA+ELPRGLRIN +SPTVL E+M  YGPFFRGFEPVTAARAALAFSRS+EG QTGQVYKV+
Sbjct:    2 SEKRLRILLVGASGTLGRAVAAELSQRHEVIAAGRSSGSIRIDLTDVQSILRGLKEAGELDAVISAAGRVTFAPLADFKPAALGESLHTLGITDKLLGQVNLALAARDHLRDGGSITLTTGILSEQPIVAGSSASMVNGAVEAFVRAAAVELPRGLRINVISPTVLTEAMPSYGPFFRGFEPVTAARAALAFSRSVEGAQTGQVYKVF 209          
BLAST of mRNA_P-wetherbeei_contig5213.5.1 vs. uniprot
Match: A0A4R0YNV7_9GAMM (Short chain dehydrogenase n=3 Tax=Dyella TaxID=231454 RepID=A0A4R0YNV7_9GAMM)

HSP 1 Score: 306 bits (785), Expect = 9.770e-104
Identity = 161/207 (77.78%), Postives = 180/207 (86.96%), Query Frame = 1
Query:   10 EPRKRILVVGASGTLGRAVVAELGARHDIVTAGRSSGDVRLDLTDPKSIEAALAKAGKIDAVISTAGKVTFAPLADFKAAAYGESMHTTGIADKLLGQVNLALAARAHLADGGSVTLTTGILTEQPIAMGSSASLVNGAVEAFVRAAAIELPRGLRINAVSPTVLAESMAGYGPFFRGFEPVTAARAALAFSRSIEGLQTGQVYKVY 630
            E R RIL+VGASGTLGRAV AELG RH+++ AGR SGDVR+DLT   SI   LA+AG++DAVISTAG+VTFAPLADF AA +GES HT GI DKL+GQVNLALAAR HL DGGS+TLTTGIL EQPIA GSSASLVNGAVEAFVRAAAIELPRGLRIN VSP VL E+M  Y P+FRGFEPVTAAR+ALA+SRS+EGLQTGQV+KV+
Sbjct:    3 ERRLRILLVGASGTLGRAVAAELGQRHEVIAAGRQSGDVRMDLTHVASIRTGLARAGELDAVISTAGRVTFAPLADFAAAPFGESKHTLGITDKLMGQVNLALAARDHLRDGGSITLTTGILAEQPIAQGSSASLVNGAVEAFVRAAAIELPRGLRINVVSPNVLVEAMGDYAPYFRGFEPVTAARSALAYSRSVEGLQTGQVFKVF 209          
BLAST of mRNA_P-wetherbeei_contig5213.5.1 vs. uniprot
Match: UPI0019BEC3D3 (short chain dehydrogenase n=5 Tax=Dyella TaxID=231454 RepID=UPI0019BEC3D3)

HSP 1 Score: 306 bits (784), Expect = 1.390e-103
Identity = 162/208 (77.88%), Postives = 181/208 (87.02%), Query Frame = 1
Query:    7 TEPRKRILVVGASGTLGRAVVAELGARHDIVTAGRSSGDVRLDLTDPKSIEAALAKAGKIDAVISTAGKVTFAPLADFKAAAYGESMHTTGIADKLLGQVNLALAARAHLADGGSVTLTTGILTEQPIAMGSSASLVNGAVEAFVRAAAIELPRGLRINAVSPTVLAESMAGYGPFFRGFEPVTAARAALAFSRSIEGLQTGQVYKVY 630
            +E R RIL+VGASGTLGRAV AELG RH+++ AGR+SG V++DLTD  SI   L +AG++DAVIS AGKVTFAPLADFKAA YGES+HT GIADKLLGQVNLALAAR +L DGGS+TLTTGIL+EQPI  GSSASLVNGAVEAFV AAAIELPRGLRIN VSP VL E+M  Y PFFRGFEPVTAARAALAFSRS+EG QTGQ+YKV+
Sbjct:    2 SEKRLRILLVGASGTLGRAVAAELGQRHEVIAAGRNSGSVKIDLTDVDSIRNGLQQAGELDAVISAAGKVTFAPLADFKAAPYGESLHTLGIADKLLGQVNLALAARDYLRDGGSITLTTGILSEQPIVEGSSASLVNGAVEAFVYAAAIELPRGLRINVVSPNVLTEAMPSYAPFFRGFEPVTAARAALAFSRSVEGAQTGQIYKVF 209          
BLAST of mRNA_P-wetherbeei_contig5213.5.1 vs. uniprot
Match: A0A370WW46_9GAMM (Short chain dehydrogenase n=1 Tax=Dyella psychrodurans TaxID=1927960 RepID=A0A370WW46_9GAMM)

HSP 1 Score: 302 bits (774), Expect = 4.620e-102
Identity = 158/208 (75.96%), Postives = 181/208 (87.02%), Query Frame = 1
Query:    7 TEPRKRILVVGASGTLGRAVVAELGARHDIVTAGRSSGDVRLDLTDPKSIEAALAKAGKIDAVISTAGKVTFAPLADFKAAAYGESMHTTGIADKLLGQVNLALAARAHLADGGSVTLTTGILTEQPIAMGSSASLVNGAVEAFVRAAAIELPRGLRINAVSPTVLAESMAGYGPFFRGFEPVTAARAALAFSRSIEGLQTGQVYKVY 630
            +E R RILVVGASGTLG+AV AEL  RH+++ AGR+SG +R+DLTD +SI  AL +AG++DAVIS AG VTFAPLADFK A YGES+HT GIADKLLGQVNLALAAR HL  GGS+TLTTGIL+EQPI  GSSASLVNGAVEAFVRAAA+E+PRGLRIN VSPTVL E+M  Y PFFRG+EPVTAARAALA+SRS+EG QTGQ+YKV+
Sbjct:    2 SERRLRILVVGASGTLGKAVAAELAQRHEVMAAGRNSGSIRIDLTDVQSIGHALKQAGELDAVISAAGNVTFAPLADFKPAPYGESLHTLGIADKLLGQVNLALAARDHLRGGGSITLTTGILSEQPIVAGSSASLVNGAVEAFVRAAAVEMPRGLRINVVSPTVLVEAMPAYAPFFRGYEPVTAARAALAYSRSVEGAQTGQIYKVF 209          
BLAST of mRNA_P-wetherbeei_contig5213.5.1 vs. uniprot
Match: A0A370X9F8_9GAMM (Short chain dehydrogenase n=2 Tax=Dyella monticola TaxID=1927958 RepID=A0A370X9F8_9GAMM)

HSP 1 Score: 301 bits (770), Expect = 1.880e-101
Identity = 158/208 (75.96%), Postives = 179/208 (86.06%), Query Frame = 1
Query:    7 TEPRKRILVVGASGTLGRAVVAELGARHDIVTAGRSSGDVRLDLTDPKSIEAALAKAGKIDAVISTAGKVTFAPLADFKAAAYGESMHTTGIADKLLGQVNLALAARAHLADGGSVTLTTGILTEQPIAMGSSASLVNGAVEAFVRAAAIELPRGLRINAVSPTVLAESMAGYGPFFRGFEPVTAARAALAFSRSIEGLQTGQVYKVY 630
            +E R RIL+VGASGTLGRAV AEL  RHD++ AGR+SG++R+DLTD  SI+ AL +AG++DAV+   G VTFAPLADFK AA+GES+HT GI DKLLGQVNLALAAR HL DGGS+TLTTGIL+EQPI  GSSASLVNGAVEAFVRAAAIELPR LRIN VSP VL E+M  Y PFFRGFEPV+AARAALAFSRS+EG QTGQVYKV+
Sbjct:    2 SERRLRILLVGASGTLGRAVEAELSQRHDVIAAGRNSGNIRIDLTDVASIQRALKQAGELDAVVGATGNVTFAPLADFKPAAFGESLHTLGITDKLLGQVNLALAARDHLRDGGSITLTTGILSEQPIVAGSSASLVNGAVEAFVRAAAIELPRRLRINVVSPNVLTEAMPAYAPFFRGFEPVSAARAALAFSRSVEGAQTGQVYKVF 209          
BLAST of mRNA_P-wetherbeei_contig5213.5.1 vs. uniprot
Match: A0A432LZX7_9GAMM (Short chain dehydrogenase n=2 Tax=Dyella TaxID=231454 RepID=A0A432LZX7_9GAMM)

HSP 1 Score: 298 bits (762), Expect = 2.610e-100
Identity = 157/203 (77.34%), Postives = 176/203 (86.70%), Query Frame = 1
Query:   22 RILVVGASGTLGRAVVAELGARHDIVTAGRSSGDVRLDLTDPKSIEAALAKAGKIDAVISTAGKVTFAPLADFKAAAYGESMHTTGIADKLLGQVNLALAARAHLADGGSVTLTTGILTEQPIAMGSSASLVNGAVEAFVRAAAIELPRGLRINAVSPTVLAESMAGYGPFFRGFEPVTAARAALAFSRSIEGLQTGQVYKVY 630
            RIL+VGASGTLGRAV AEL  RH+++ AGR SG +R+DLTD  SI++AL +AG++DAVIS AG VTFAPL  FK A YGES+HT G+ADKL+GQVNLALAAR HL DGGS+TLTTGIL+EQPI  GSSASLVNGAVEAFVRAAAIELPRGLRIN VSP VL ESM  Y PFFRGFEPV+AARAA+AFSRS+EG QTGQVYKVY
Sbjct:    2 RILLVGASGTLGRAVEAELKPRHEVIAAGRGSGSLRIDLTDVASIQSALQQAGELDAVISAAGNVTFAPLEAFKPAPYGESLHTQGLADKLMGQVNLALAARDHLRDGGSITLTTGILSEQPIVAGSSASLVNGAVEAFVRAAAIELPRGLRINVVSPNVLTESMPAYAPFFRGFEPVSAARAAMAFSRSVEGAQTGQVYKVY 204          
BLAST of mRNA_P-wetherbeei_contig5213.5.1 vs. uniprot
Match: UPI001F438391 (short chain dehydrogenase n=1 Tax=Dyella sp. 2HG41-7 TaxID=2883239 RepID=UPI001F438391)

HSP 1 Score: 295 bits (754), Expect = 4.310e-99
Identity = 153/203 (75.37%), Postives = 177/203 (87.19%), Query Frame = 1
Query:   22 RILVVGASGTLGRAVVAELGARHDIVTAGRSSGDVRLDLTDPKSIEAALAKAGKIDAVISTAGKVTFAPLADFKAAAYGESMHTTGIADKLLGQVNLALAARAHLADGGSVTLTTGILTEQPIAMGSSASLVNGAVEAFVRAAAIELPRGLRINAVSPTVLAESMAGYGPFFRGFEPVTAARAALAFSRSIEGLQTGQVYKVY 630
            RIL+VGASGTLGRAV AEL  RHD++ AGR+SG +R+DLTD +SI   L + G++DAV+S AGKVTFAPL+DFKAA +GES+HT GI+DKLLGQVNLALAAR  L DGGS+TLTTGIL+EQPI  G+SASLVNGAVEAFVRAAAIELPRGLRIN VSP VL E+M  Y PFFRGFEPV+AARAA+AFSRS+EG QTGQ+YKV+
Sbjct:    2 RILLVGASGTLGRAVQAELAQRHDVIAAGRNSGSIRMDLTDVQSIRDGLKQVGELDAVVSAAGKVTFAPLSDFKAAPFGESLHTLGISDKLLGQVNLALAARDCLRDGGSITLTTGILSEQPIVAGTSASLVNGAVEAFVRAAAIELPRGLRINVVSPNVLTEAMPAYAPFFRGFEPVSAARAAMAFSRSVEGAQTGQIYKVF 204          
BLAST of mRNA_P-wetherbeei_contig5213.5.1 vs. uniprot
Match: A0A7X0E3M0_9GAMM (NAD(P)-dependent dehydrogenase (Short-subunit alcohol dehydrogenase family) n=2 Tax=Rhodanobacter sp. MP1X3 TaxID=2723086 RepID=A0A7X0E3M0_9GAMM)

HSP 1 Score: 291 bits (746), Expect = 8.440e-98
Identity = 152/207 (73.43%), Postives = 174/207 (84.06%), Query Frame = 1
Query:   10 EPRKRILVVGASGTLGRAVVAELGARHDIVTAGRSSGDVRLDLTDPKSIEAALAKAGKIDAVISTAGKVTFAPLADFKAAAYGESMHTTGIADKLLGQVNLALAARAHLADGGSVTLTTGILTEQPIAMGSSASLVNGAVEAFVRAAAIELPRGLRINAVSPTVLAESMAGYGPFFRGFEPVTAARAALAFSRSIEGLQTGQVYKVY 630
            E R RIL+VGASGTLGRAV AEL  RH+++ AGR SG++R+DLTD  SI   L +AG +DAV+  AG+VTFAPLADF  AAYG S+HT GIADKLLGQVNLALAAR HL DGGS+TLTTGI +EQPI  GSSAS++NGAVE+FVRAAAIELPRGLRIN VSP VL E+M  Y P+FRGFEPV AARAALAFSRS+EG QTGQ+YKV+
Sbjct:    3 ERRLRILLVGASGTLGRAVAAELAQRHEVIGAGRHSGELRMDLTDVDSIRLGLNQAGVLDAVVCAAGQVTFAPLADFLPAAYGNSLHTLGIADKLLGQVNLALAAREHLRDGGSITLTTGITSEQPIVQGSSASMINGAVESFVRAAAIELPRGLRINVVSPNVLTEAMGAYAPYFRGFEPVPAARAALAFSRSVEGAQTGQIYKVF 209          
BLAST of mRNA_P-wetherbeei_contig5213.5.1 vs. uniprot
Match: UPI001AEE9AF4 (short chain dehydrogenase n=1 Tax=Methylocapsa sp. S129 TaxID=1641869 RepID=UPI001AEE9AF4)

HSP 1 Score: 276 bits (705), Expect = 1.460e-91
Identity = 146/209 (69.86%), Postives = 167/209 (79.90%), Query Frame = 1
Query:    1 MATEPRKRILVVGASGTLGRAVVAELGARHDIVTAGRSSGDVRLDLTDPKSIEAALAKAGKIDAVISTAGKVTFAPLADFKAAAYGESMHTTGIADKLLGQVNLALAARAHLADGGSVTLTTGILTEQPIAMGSSASLVNGAVEAFVRAAAIELPRGLRINAVSPTVLAESMAGYGPFFRGFEPVTAARAALAFSRSIEGLQTGQVYKV 627
            M+   R RILVVGASGTLGRA+V+ELG RHDI+ AG  SGD+R+D+ DP SI AA A AG +DAV   AG V FAPL+ F  A    S++  G+A+KL+GQVNLALAAR  L DGGS+TL TGIL +QPIA GSSAS+VNGA+EAF RAAAIELPRGLRIN VSPTV  ESM GYGPFFRGFEPV  A+AALAFSRSIEG QTGQ+Y+V
Sbjct:    1 MSENERMRILVVGASGTLGRAIVSELGGRHDIIAAGSKSGDIRIDIADPASIVAAFAAAGPLDAVACAAGAVNFAPLSAFAPAGVAGSLYGLGLANKLMGQVNLALAARDALRDGGSITLITGILADQPIAQGSSASMVNGAIEAFARAAAIELPRGLRINVVSPTVFVESMEGYGPFFRGFEPVPVAKAALAFSRSIEGRQTGQIYRV 209          
BLAST of mRNA_P-wetherbeei_contig5213.5.1 vs. uniprot
Match: A0A2Z6E6H5_9GAMM (Short chain dehydrogenase n=1 Tax=Aerosticca soli TaxID=2010829 RepID=A0A2Z6E6H5_9GAMM)

HSP 1 Score: 275 bits (704), Expect = 2.080e-91
Identity = 144/207 (69.57%), Postives = 170/207 (82.13%), Query Frame = 1
Query:   10 EPRKRILVVGASGTLGRAVVAELGARHDIVTAGRSSGDVRLDLTDPKSIEAALAKAGKIDAVISTAGKVTFAPLADFKAAAYGESMHTTGIADKLLGQVNLALAARAHLADGGSVTLTTGILTEQPIAMGSSASLVNGAVEAFVRAAAIELPRGLRINAVSPTVLAESMAGYGPFFRGFEPVTAARAALAFSRSIEGLQTGQVYKVY 630
            E R RIL+VGA GT+GRA+ AELGARH I+ AGR SGD+  DL DP  +  ALA AG +DAVI  AG   FAPLADF AA YG S+HT G+ADKLLGQVNLALAAR  LA+GGS+TLTTG+L E+P+  GSS+SLVNGA+++FVRAAAIELPRGLRINAVSP V+AES+  Y P+FRGF+PV AAR ALA+SRS+EG QTGQVY+V+
Sbjct:    3 ERRLRILLVGAGGTIGRAIAAELGARHAIIGAGRRSGDLHFDLADPAGMREALAGAGPLDAVICAAGNTAFAPLADFVAAPYGASLHTLGLADKLLGQVNLALAARDVLAEGGSITLTTGLLAEEPVVEGSSSSLVNGALQSFVRAAAIELPRGLRINAVSPGVVAESLDAYAPYFRGFDPVPAARVALAYSRSVEGAQTGQVYRVH 209          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5213.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3S0PEV7_9GAMM1.690e-10477.40Short chain dehydrogenase n=1 Tax=Dyella dinghuens... [more]
A0A4R0YNV7_9GAMM9.770e-10477.78Short chain dehydrogenase n=3 Tax=Dyella TaxID=231... [more]
UPI0019BEC3D31.390e-10377.88short chain dehydrogenase n=5 Tax=Dyella TaxID=231... [more]
A0A370WW46_9GAMM4.620e-10275.96Short chain dehydrogenase n=1 Tax=Dyella psychrodu... [more]
A0A370X9F8_9GAMM1.880e-10175.96Short chain dehydrogenase n=2 Tax=Dyella monticola... [more]
A0A432LZX7_9GAMM2.610e-10077.34Short chain dehydrogenase n=2 Tax=Dyella TaxID=231... [more]
UPI001F4383914.310e-9975.37short chain dehydrogenase n=1 Tax=Dyella sp. 2HG41... [more]
A0A7X0E3M0_9GAMM8.440e-9873.43NAD(P)-dependent dehydrogenase (Short-subunit alco... [more]
UPI001AEE9AF41.460e-9169.86short chain dehydrogenase n=1 Tax=Methylocapsa sp.... [more]
A0A2Z6E6H5_9GAMM2.080e-9169.57Short chain dehydrogenase n=1 Tax=Aerosticca soli ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5213contigP-wetherbeei_contig5213:3098..3730 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1500890.JQNL01000001_gene2208
PFAMsadh_short_C2
Model size633
Max annot lvl135614|Xanthomonadales
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.75e-82
EggNOG OGsCOG1028@1|root,COG1028@2|Bacteria,1RA3U@1224|Proteobacteria,1RREY@1236|Gammaproteobacteria,1X6EF@135614|Xanthomonadales
DescriptionEnoyl-(Acyl carrier protein) reductase
Cds size633
COG categoryIQ
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186781.738844-CDS-P-wetherbeei_contig5213:3097..37301683186781.738844-CDS-P-wetherbeei_contig5213:3097..3730Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5213 3098..3730 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5213.5.1prot_P-wetherbeei_contig5213.5.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5213 3098..3730 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5213.5.1

>prot_P-wetherbeei_contig5213.5.1 ID=prot_P-wetherbeei_contig5213.5.1|Name=mRNA_P-wetherbeei_contig5213.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=211bp
MATEPRKRILVVGASGTLGRAVVAELGARHDIVTAGRSSGDVRLDLTDPK
SIEAALAKAGKIDAVISTAGKVTFAPLADFKAAAYGESMHTTGIADKLLG
QVNLALAARAHLADGGSVTLTTGILTEQPIAMGSSASLVNGAVEAFVRAA
AIELPRGLRINAVSPTVLAESMAGYGPFFRGFEPVTAARAALAFSRSIEG
LQTGQVYKVY*
back to top

mRNA from alignment at P-wetherbeei_contig5213:3098..3730-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5213.5.1 ID=mRNA_P-wetherbeei_contig5213.5.1|Name=mRNA_P-wetherbeei_contig5213.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=633bp|location=Sequence derived from alignment at P-wetherbeei_contig5213:3098..3730- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCCACCGAACCCCGCAAACGCATCCTCGTCGTAGGCGCCTCCGGCAC GCTCGGCCGCGCCGTCGTCGCCGAACTCGGCGCGCGCCACGACATCGTCA CCGCCGGGCGCAGCTCCGGCGACGTGCGGCTCGACCTCACCGACCCCAAG AGCATCGAGGCCGCGCTGGCCAAGGCCGGGAAGATCGATGCGGTGATTTC GACCGCGGGCAAGGTCACCTTCGCACCGCTGGCCGATTTCAAGGCCGCGG CCTACGGCGAGTCCATGCACACCACCGGCATCGCCGACAAACTGCTCGGG CAGGTGAACCTGGCGCTGGCGGCGCGCGCCCACCTTGCCGATGGGGGTTC GGTCACGCTGACGACCGGGATCCTCACCGAGCAGCCGATTGCGATGGGCT CCTCGGCGAGCCTTGTGAACGGAGCAGTGGAAGCATTCGTCCGCGCCGCA GCCATCGAGCTGCCGCGCGGCCTGCGCATCAACGCAGTCAGCCCCACCGT GCTCGCCGAATCGATGGCCGGATACGGCCCGTTCTTCCGCGGGTTCGAAC CGGTGACCGCGGCGCGCGCGGCGTTGGCCTTCAGCCGCAGCATCGAGGGC CTGCAGACCGGGCAGGTCTACAAGGTCTACTAA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig5213:3098..3730-

>mRNA_P-wetherbeei_contig5213.5.1 ID=mRNA_P-wetherbeei_contig5213.5.1|Name=mRNA_P-wetherbeei_contig5213.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=633bp|location=Sequence derived from alignment at P-wetherbeei_contig5213:3098..3730- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCCACCGAACCCCGCAAACGCATCCTCGTCGTAGGCGCCTCCGGCAC
GCTCGGCCGCGCCGTCGTCGCCGAACTCGGCGCGCGCCACGACATCGTCA
CCGCCGGGCGCAGCTCCGGCGACGTGCGGCTCGACCTCACCGACCCCAAG
AGCATCGAGGCCGCGCTGGCCAAGGCCGGGAAGATCGATGCGGTGATTTC
GACCGCGGGCAAGGTCACCTTCGCACCGCTGGCCGATTTCAAGGCCGCGG
CCTACGGCGAGTCCATGCACACCACCGGCATCGCCGACAAACTGCTCGGG
CAGGTGAACCTGGCGCTGGCGGCGCGCGCCCACCTTGCCGATGGGGGTTC
GGTCACGCTGACGACCGGGATCCTCACCGAGCAGCCGATTGCGATGGGCT
CCTCGGCGAGCCTTGTGAACGGAGCAGTGGAAGCATTCGTCCGCGCCGCA
GCCATCGAGCTGCCGCGCGGCCTGCGCATCAACGCAGTCAGCCCCACCGT
GCTCGCCGAATCGATGGCCGGATACGGCCCGTTCTTCCGCGGGTTCGAAC
CGGTGACCGCGGCGCGCGCGGCGTTGGCCTTCAGCCGCAGCATCGAGGGC
CTGCAGACCGGGCAGGTCTACAAGGTCTACTAA
back to top