mRNA_P-wetherbeei_contig51845.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig51845.1.1
Unique NamemRNA_P-wetherbeei_contig51845.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig51845.1.1 vs. uniprot
Match: A0A1M5WTA9_9BACT (Chaperone of endosialidase n=1 Tax=Chryseolinea serpens TaxID=947013 RepID=A0A1M5WTA9_9BACT)

HSP 1 Score: 62.8 bits (151), Expect = 1.150e-9
Identity = 34/63 (53.97%), Postives = 44/63 (69.84%), Query Frame = 1 
Query:    1 MKKKVLLLLFTVV-SICCYGQNNTNTGTNAGNSGSDNTSIGYKAGDLVEGAFNTFLGSYSGKS 186
            MK K  LLL  ++ +I    Q NTN GTNAGN+GS+NTSIGY A D+V G +N  +GSY+G +
Sbjct:    1 MKMKFKLLLVALLCAIISRAQTNTNLGTNAGNAGSENTSIGYNANDVVTGVYNVGVGSYAGSA 63
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BLAST of mRNA_P-wetherbeei_contig51845.1.1 vs. uniprot
Match: A0A385SRU0_9BACT (Peptidase S74 domain-containing protein n=1 Tax=Chryseolinea soli TaxID=2321403 RepID=A0A385SRU0_9BACT)

HSP 1 Score: 60.8 bits (146), Expect = 5.470e-9
Identity = 32/58 (55.17%), Postives = 39/58 (67.24%), Query Frame = 1 
Query:    7 KKVLLLLFTVVSICCYGQNNTNTGTNAGNSGSDNTSIGYKAGDLVEGAFNTFLGSYSG 180
            K  L L+F ++      Q NTN GTNAGN+GS+NTSIGY A +LV G  N  LGSY+G
Sbjct:    4 KWTLALIFFLLVTVARSQTNTNLGTNAGNAGSENTSIGYLANNLVTGTLNVSLGSYAG 61
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BLAST of mRNA_P-wetherbeei_contig51845.1.1 vs. uniprot
Match: L8JR58_9BACT (Peptidase S74 domain-containing protein n=1 Tax=Fulvivirga imtechensis AK7 TaxID=1237149 RepID=L8JR58_9BACT)

HSP 1 Score: 50.1 bits (118), Expect = 3.500e-5
Identity = 26/43 (60.47%), Postives = 32/43 (74.42%), Query Frame = 1 
Query:   52 YGQNNTNTGTNAGNSGSDNTSIGYKAGDLVEGAFNTFLGSYSG 180
            YGQN T  GT AGN+G+ NTS+GY AGD V G  N+F G+Y+G
Sbjct:   19 YGQN-TAYGTGAGNAGTQNTSVGYYAGDKVTGYNNSFFGTYAG 60
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BLAST of mRNA_P-wetherbeei_contig51845.1.1 vs. uniprot
Match: A0A2V4CL44_9FLAO (Uncharacterized protein n=1 Tax=Flavobacterium hydrophilum TaxID=2211445 RepID=A0A2V4CL44_9FLAO)

HSP 1 Score: 49.3 bits (116), Expect = 6.350e-5
Identity = 31/62 (50.00%), Postives = 43/62 (69.35%), Query Frame = 1 
Query:    1 MKKKVLLL--LFTVVSICCYGQNNTNTGTNAGNSGSDNTSIGYKAGDLVEGAFNTFLGSYSG 180
            MK K+L L  LF + S     QN TNTGT+AGN+G++N++ GY AG++V G  N+F G+ SG
Sbjct:    1 MKLKLLTLTSLFFINSNIINAQN-TNTGTDAGNAGTNNSAFGYYAGNVVTGNNNSFFGTNSG 61
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig51845.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A1M5WTA9_9BACT1.150e-953.97Chaperone of endosialidase n=1 Tax=Chryseolinea se... [more]
A0A385SRU0_9BACT5.470e-955.17Peptidase S74 domain-containing protein n=1 Tax=Ch... [more]
L8JR58_9BACT3.500e-560.47Peptidase S74 domain-containing protein n=1 Tax=Fu... [more]
A0A2V4CL44_9FLAO6.350e-550.00Uncharacterized protein n=1 Tax=Flavobacterium hyd... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig51845contigP-wetherbeei_contig51845:18..257 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1237149.C900_04525
PFAMsPeptidase_S74
Model size240
Max annot lvl976|Bacteroidetes
Hectar predicted targeting categorysignal peptide
Exons1
Evalue5.74e-06
EggNOG OGsCOG3210@1|root,COG5295@1|root,COG3210@2|Bacteria,COG5295@2|Bacteria,4NKG1@976|Bacteroidetes,47NK6@768503|Cytophagia
Descriptiondomain, Protein
Cds size240
COG categoryMUW
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186777.9180198-CDS-P-wetherbeei_contig51845:17..2571683186777.9180198-CDS-P-wetherbeei_contig51845:17..257Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig51845 18..257 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig51845.1.1prot_P-wetherbeei_contig51845.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig51845 18..257 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig51845.1.1

>prot_P-wetherbeei_contig51845.1.1 ID=prot_P-wetherbeei_contig51845.1.1|Name=mRNA_P-wetherbeei_contig51845.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=80bp
MKKKVLLLLFTVVSICCYGQNNTNTGTNAGNSGSDNTSIGYKAGDLVEGA
FNTFLGSYSGKSQVNGTYNTFLGAYSGYIT
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mRNA from alignment at P-wetherbeei_contig51845:18..257-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig51845.1.1 ID=mRNA_P-wetherbeei_contig51845.1.1|Name=mRNA_P-wetherbeei_contig51845.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=240bp|location=Sequence derived from alignment at P-wetherbeei_contig51845:18..257- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAAAAGAAAGTTTTGCTTTTACTGTTTACTGTGGTGTCTATATGTTG
CTATGGTCAGAATAACACCAATACTGGCACCAATGCTGGAAATTCTGGAT
CAGATAATACTTCTATTGGCTATAAAGCTGGAGATTTGGTCGAAGGAGCG
TTTAACACGTTTCTGGGTTCTTATAGTGGGAAAAGTCAAGTTAATGGTAC
GTATAATACTTTTCTAGGTGCTTATTCAGGATATATCACG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig51845:18..257-

>mRNA_P-wetherbeei_contig51845.1.1 ID=mRNA_P-wetherbeei_contig51845.1.1|Name=mRNA_P-wetherbeei_contig51845.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=240bp|location=Sequence derived from alignment at P-wetherbeei_contig51845:18..257- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAAAAGAAAGTTTTGCTTTTACTGTTTACTGTGGTGTCTATATGTTG
CTATGGTCAGAATAACACCAATACTGGCACCAATGCTGGAAATTCTGGAT
CAGATAATACTTCTATTGGCTATAAAGCTGGAGATTTGGTCGAAGGAGCG
TTTAACACGTTTCTGGGTTCTTATAGTGGGAAAAGTCAAGTTAATGGTAC
GTATAATACTTTTCTAGGTGCTTATTCAGGATATATCACG
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