prot_P-wetherbeei_contig5183.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig5183.1.1
Unique Nameprot_P-wetherbeei_contig5183.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length281
Homology
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BLAST of mRNA_P-wetherbeei_contig5183.1.1 vs. uniprot
Match: A0A6H5JNY1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY1_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 3.950e-8
Identity = 63/209 (30.14%), Postives = 91/209 (43.54%), Query Frame = 0 
Query:   52 FEMQAFLHPNLANMRYVDKLASSPAHADVVKKKIRAGIHGLLTEVV--AANHA---------AATAXXXXXXXXXXXXXXXAGEEDASVDQKHKATIGYF---SGGG------------------------AGIVRTVLAAPASWGSLEPDFCMAGRLIRPDRTSLRPRFVEMRIFLNANIDAMPALDWTPALSAEAAEMAVPVRLQDP 222
            F+MQ  LHP  A++RYVDKLAS+ A A  VK  I   +  L  ++   AA H          +A A               + EE  S +Q  +A +       GG                         A + R V+ A AS   LE DF  AGR++   R+++  ++VEM +FL+ N+D +P  D T  L+   A   +P RL +P
Sbjct:  264 FDMQMALHPTTADLRYVDKLASTSAFAGAVKSTITDKVISLAVKLAEAAALHTGDGSTTPAWSAAADKPAAKRARQAAAPGSKEEPPSFEQTARAELTKLRAVQGGSLAAGLRCEDVLKWWKMWAHAYPLLARVARVVIGALASAAVLEHDFSNAGRMMTSSRSTMDSKYVEMILFLHGNLDLIPE-DITK-LTEAVARTKIPGRLANP 470
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5183.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JNY1_9PHAE3.950e-830.14Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5183contigP-wetherbeei_contig5183:1911..2753 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5183.1.1mRNA_P-wetherbeei_contig5183.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig5183 1799..3082 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig5183.1.1 ID=prot_P-wetherbeei_contig5183.1.1|Name=mRNA_P-wetherbeei_contig5183.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=281bp
MDSKAGRYGGHRGGRRWRRGRSCAMRSGVACLFRYEETCTTDASGTGSRS
FFEMQAFLHPNLANMRYVDKLASSPAHADVVKKKIRAGIHGLLTEVVAAN
HAAATAAAAAAAEAAKAAETAAGEEDASVDQKHKATIGYFSGGGAGIVRT
VLAAPASWGSLEPDFCMAGRLIRPDRTSLRPRFVEMRIFLNANIDAMPAL
DWTPALSAEAAEMAVPVRLQDPAVLKATAALFRIQPAAGVEAGVDDRGTS
EMRTRGVPMMMRRRKMRMKRRRPTVFSQVA*
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