prot_P-wetherbeei_contig5181.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig5181.1.1
Unique Nameprot_P-wetherbeei_contig5181.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length321
Homology
BLAST of mRNA_P-wetherbeei_contig5181.1.1 vs. uniprot
Match: A0A6H5JK59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK59_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 5.650e-13
Identity = 54/127 (42.52%), Postives = 71/127 (55.91%), Query Frame = 0
Query:   27 ISGLYNEGNSCFLNSILQGL-RATPLLSTLEQGCPN---SGRT-PTADALASIARRLENAR----------ESTASAADVLRALVHAQDSFRGNGQHDAHEALRALLDSVHEETCRRVPHWFAPGHA 138
            + GL NEGN C+LN+ LQ L R  P  + L +  P    +GR  P A A++ +   + +               A+ A+V+RALV     F GNGQHDAHEALR++LD +HEE  R VP  F PGHA
Sbjct:   27 VVGLTNEGNFCYLNASLQALARCAPFRTHLVECVPGPSVAGRPCPLAFAMSKLYSEMWSDEGXXXXXXXXXXXAATPAEVIRALVKGNRWFAGNGQHDAHEALRSILDLLHEELRRPVPVSFEPGHA 153          
BLAST of mRNA_P-wetherbeei_contig5181.1.1 vs. uniprot
Match: D8LS72_ECTSI (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS72_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 2.330e-12
Identity = 53/127 (41.73%), Postives = 70/127 (55.12%), Query Frame = 0
Query:   27 ISGLYNEGNSCFLNSILQGL-RATPLLSTLEQGCPN---SGRT-PTADALASIARRLENAR----------ESTASAADVLRALVHAQDSFRGNGQHDAHEALRALLDSVHEETCRRVPHWFAPGHA 138
            + GL NEGN C+LN+ LQ L R  P  + L +  P    +GR  P A A++ +   + +                + A+V+RALV     F GNGQHDAHEALR++LD +HEE  R VP  F PGHA
Sbjct:   68 VVGLTNEGNFCYLNASLQALARCAPFRAHLVECVPGPSVAGRPCPLAFAMSKLYSEMWSDEGXXXXXXXXXXRAETPAEVIRALVKGNRWFAGNGQHDAHEALRSILDLLHEELRRPVPVSFEPGHA 194          
BLAST of mRNA_P-wetherbeei_contig5181.1.1 vs. uniprot
Match: J9IRQ3_9SPIT (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9IRQ3_9SPIT)

HSP 1 Score: 68.6 bits (166), Expect = 3.440e-9
Identity = 48/119 (40.34%), Postives = 63/119 (52.94%), Query Frame = 0
Query:   10 ASTLDSLLEDDEPLRGKISGLYNEGNSCFLNSILQGLRATPLLSTLEQGCPNSG----RTPTADALASIARRLENARESTASAADVLRALVHAQDSFRGNGQHDAHEALRALLDSVHEE 124
            AST  SL +   P      GL N GN+CFLNSILQ + A+P L+    G    G    +   ADA  S+ ++++   E+T S  D+  A+      F G GQ DA E LR LLD +HEE
Sbjct:  145 ASTTSSLSKKSGPP----PGLRNIGNTCFLNSILQCIFASPYLNDYFLGQYQKGSGVGKARLADAYHSLIKQVKQGHETTISPTDLKYAVSKVAPQFSGYGQQDAQEFLRFLLDGLHEE 259          
BLAST of mRNA_P-wetherbeei_contig5181.1.1 vs. uniprot
Match: A0A078AN47_STYLE (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078AN47_STYLE)

HSP 1 Score: 64.7 bits (156), Expect = 6.610e-8
Identity = 43/104 (41.35%), Postives = 57/104 (54.81%), Query Frame = 0
Query:   25 GKISGLYNEGNSCFLNSILQGLRATPLLSTL---EQGCPNSGRTPT-ADALASIARRLENARESTASAADVLRALVHAQDSFRGNGQHDAHEALRALLDSVHEE 124
            G   GL N GN+CF+NSILQ + ATP L+     E    +  R+   ADA  S+ ++++   EST S  D+  A+      F G GQ DA E LR  LD +HEE
Sbjct:  175 GPPPGLRNIGNTCFMNSILQCVFATPYLNDFFLTEYSKSSQYRSARLADAYNSLIKQVKQGYESTISPTDLKYAVSKVAPQFSGYGQQDAQEFLRFFLDGLHEE 278          
BLAST of mRNA_P-wetherbeei_contig5181.1.1 vs. uniprot
Match: D8S7D6_SELML (USP domain-containing protein (Fragment) n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8S7D6_SELML)

HSP 1 Score: 62.4 bits (150), Expect = 2.620e-7
Identity = 47/121 (38.84%), Postives = 59/121 (48.76%), Query Frame = 0
Query:   29 GLYNEGNSCFLNSILQGLRATPLLSTLEQGCPNSGRTPTADALASIARRLENARE-------------------STASAADVLRALVHAQDSFRGNGQHDAHEALRALLDSVHEETCRRVP 130
            GL NEGN+CFLNS LQ L  T  LS+   G P S    T  A A   R   +  E                   STASA+ +L++L      F GN QHDA EA+R ++D +HE   R+ P
Sbjct:    3 GLMNEGNTCFLNSCLQCLAHTVPLSSAILG-PFSELIQTKGAAARSRRDTASLSEMLAYSFRQLLKDLCGKPSYSTASASMLLQSLQGLSPQFAGNRQHDAQEAMRTIIDGLHEALNRKPP 122          
BLAST of mRNA_P-wetherbeei_contig5181.1.1 vs. uniprot
Match: UPI000D1CD0B5 (ubiquitin carboxyl-terminal hydrolase Usp2 isoform X1 n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1CD0B5)

HSP 1 Score: 62.4 bits (150), Expect = 3.720e-7
Identity = 47/121 (38.84%), Postives = 59/121 (48.76%), Query Frame = 0
Query:   29 GLYNEGNSCFLNSILQGLRATPLLSTLEQGCPNSGRTPTADALASIARRLENARE-------------------STASAADVLRALVHAQDSFRGNGQHDAHEALRALLDSVHEETCRRVP 130
            GL NEGN+CFLNS LQ L  T  LS+   G P S    T  A A   R   +  E                   STASA+ +L++L      F GN QHDA EA+R ++D +HE   R+ P
Sbjct:  244 GLMNEGNTCFLNSCLQCLAHTVPLSSAILG-PFSELIQTKGAAARSRRDTASLSEMLAYSFRQLLKDLCGKPSYSTASASMLLQSLQGLSPQFAGNRQHDAQEAMRTIIDGLHEALNRKPP 363          
BLAST of mRNA_P-wetherbeei_contig5181.1.1 vs. uniprot
Match: A0A7S0DIH1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DIH1_9EUKA)

HSP 1 Score: 61.2 bits (147), Expect = 6.550e-7
Identity = 39/99 (39.39%), Postives = 55/99 (55.56%), Query Frame = 0
Query:   29 GLYNEGNSCFLNSILQGLRAT-PLLSTLEQGCPNSGRTPTADALASIARRLENA--RESTASAADVLRALVHAQDSFRGNGQHDAHEALRALLDSVHEE 124
            GL N GN+CF NS++Q L  T PL ++L +  P    T   D+L      +  +  + S+ + + V   +    D FRG  QHD+HE LRALLDS+ EE
Sbjct:  243 GLANLGNTCFFNSVMQNLAITDPLRTSLIRQGPTG--THLNDSLLGFMNEMSKSEGKRSSMNPSGVFSNVCRYHDRFRGGRQHDSHELLRALLDSLKEE 339          
BLAST of mRNA_P-wetherbeei_contig5181.1.1 vs. uniprot
Match: A0A1R2CTX5_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CTX5_9CILI)

HSP 1 Score: 60.8 bits (146), Expect = 1.580e-6
Identity = 38/109 (34.86%), Postives = 55/109 (50.46%), Query Frame = 0
Query:   28 SGLYNEGNSCFLNSILQGLRATPLLSTLEQG-------CPNSGRTPTADALA--SIARRLENARESTASAADVLRALVHAQDSFRGNGQHDAHEALRALLDSVHEETCR 127
            SGL N GN+CFLNS+LQ L  TP+      G        P+  +     +L   ++A+ +  ++ S  +     R+L+     F G  QHD HE L  +LDS+HEE  R
Sbjct:  481 SGLVNLGNTCFLNSVLQSLLHTPMFEKFFTGDSVISYITPSKAKDKIILSLELNALAKEMSASKTSKVTPNKFHRSLIKKFSMFDGTEQHDCHECLSLILDSLHEELSR 589          
BLAST of mRNA_P-wetherbeei_contig5181.1.1 vs. uniprot
Match: A0A8B8GKC6_9HEMI (Ubiquitinyl hydrolase 1 n=2 Tax=Sipha flava TaxID=143950 RepID=A0A8B8GKC6_9HEMI)

HSP 1 Score: 60.5 bits (145), Expect = 1.970e-6
Identity = 45/133 (33.83%), Postives = 67/133 (50.38%), Query Frame = 0
Query:   14 DSLLEDDEPLRGKISGLYNEGNSCFLNSILQGLRATP-----LLSTLEQGCPNSGR-------------TPTADALASIARRLENARESTASAADVLRALVHAQDSFRGNGQHDAHEALRALLDSVHEETCRR 128
            +S++ + E  R    GL N GN+CF NS+LQ L  TP     LL   E G P + +             +P  + L +  + + N R+ST + + +L +L      F G  QHD+HE LR LLDSV ++  +R
Sbjct:  215 ESIINNVERSRRPPRGLNNLGNTCFYNSVLQCLAQTPFLKNVLLDNSEFGEPITIQLDNEEITVLQEKWSPLTENLCTTLQEITNGRDSTFTPSALLDSLRKKCKMFIGYSQHDSHELLRHLLDSVRDDDLKR 347          
BLAST of mRNA_P-wetherbeei_contig5181.1.1 vs. uniprot
Match: A0A812JBM3_9DINO (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812JBM3_9DINO)

HSP 1 Score: 60.5 bits (145), Expect = 2.040e-6
Identity = 38/115 (33.04%), Postives = 54/115 (46.96%), Query Frame = 0
Query:   27 ISGLYNEGNSCFLNSILQGLRATPL-------LSTLEQGCPNSGRTPTADALASIARRLENARESTASAADVLRALVHAQDSFRGNGQHDAHEALRALLDSVHEETCRRVPHWFA 134
            ++GL N GN+CFLN+ LQ L   P        L        +S +     A+ S+     +    T S  DVL  L      F G  QHD+HEA+R +L+ +HE   +R  +W A
Sbjct:   49 LTGLVNLGNTCFLNAGLQALMCVPHFARSFTELYQTSSAATHSHKRTILRAMESLVCACASTELDTQSPRDVLGTLRSVNQMFSGYHQHDSHEAMRFILNDIHETAAQRENNWGA 163          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5181.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JK59_9PHAE5.650e-1342.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LS72_ECTSI2.330e-1241.73Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ecto... [more]
J9IRQ3_9SPIT3.440e-940.34Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Oxyt... [more]
A0A078AN47_STYLE6.610e-841.35Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Styl... [more]
D8S7D6_SELML2.620e-738.84USP domain-containing protein (Fragment) n=2 Tax=S... [more]
UPI000D1CD0B53.720e-738.84ubiquitin carboxyl-terminal hydrolase Usp2 isoform... [more]
A0A7S0DIH1_9EUKA6.550e-739.39Hypothetical protein (Fragment) n=1 Tax=Amorphochl... [more]
A0A1R2CTX5_9CILI1.580e-634.86Uncharacterized protein n=1 Tax=Stentor coeruleus ... [more]
A0A8B8GKC6_9HEMI1.970e-633.83Ubiquitinyl hydrolase 1 n=2 Tax=Sipha flava TaxID=... [more]
A0A812JBM3_9DINO2.040e-633.04Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Symb... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.70.10Cysteine proteinasescoord: 17..156
e-value: 1.2E-21
score: 79.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 137..261
NoneNo IPR availablePANTHERPTHR21646UBIQUITIN CARBOXYL-TERMINAL HYDROLASEcoord: 19..133
NoneNo IPR availablePANTHERPTHR21646:SF39CARBOXYL-TERMINAL HYDROLASE, PUTATIVE-RELATEDcoord: 19..133
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 29..127
e-value: 1.1E-12
score: 48.1
IPR018200Ubiquitin specific protease, conserved sitePROSITEPS00972USP_1coord: 29..44
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 28..320
score: 12.6369
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 26..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5181contigP-wetherbeei_contig5181:353..1568 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5181.1.1mRNA_P-wetherbeei_contig5181.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig5181 26..1683 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig5181.1.1 ID=prot_P-wetherbeei_contig5181.1.1|Name=mRNA_P-wetherbeei_contig5181.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=321bp
MTDYELESDASTLDSLLEDDEPLRGKISGLYNEGNSCFLNSILQGLRATP
LLSTLEQGCPNSGRTPTADALASIARRLENARESTASAADVLRALVHAQD
SFRGNGQHDAHEALRALLDSVHEETCRRVPHWFAPGHARAQRAQEPRWEQ
AGGSGSGGNVGSGGGGGGVNGSVGGGSNGDGGRKLNDCSNGSGDPGDAES
PVKPQRHGGGDATGPPTPLHQRPVACFPGSGSSDAGAPNSLPSPAAAPGS
RGAGAASPMEGDYGFGRSSGLGGGCCGGGGGSGGGGGPGCSSTWSMAMAA
ALAMAAALAMPRRRMRATTS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001394Peptidase_C19_UCH
IPR018200USP_CS
IPR028889USP_dom
IPR038765Papain-like_cys_pep_sf