mRNA_P-wetherbeei_contig51792.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig51792.1.1
Unique NamemRNA_P-wetherbeei_contig51792.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig51792.1.1 vs. uniprot
Match: A0A6A7LY65_9PROT (Hydroxyquinol 1,2-dioxygenase n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A6A7LY65_9PROT)

HSP 1 Score: 187 bits (474), Expect = 5.920e-59
Identity = 89/100 (89.00%), Postives = 95/100 (95.00%), Query Frame = 1
Query:    1 VQVHTVFGSLADHTKGSIELVSGEARHYVFSNIFDVAAKSKPYERVVVAKNLEYVQEVMRAEGVSLWFACGHDEIALCMEGEITVDFIKMAHPPSAAKNG 300
            VQVHTVFGS+ D+TKGSIELVSGEARHYVFSNIFDVAAKSKPYERVVVAKN+EYVQEVMRAEGVS WFACGHDE ALCM+GE+TVDFIKM +PPS AKNG
Sbjct:    3 VQVHTVFGSITDYTKGSIELVSGEARHYVFSNIFDVAAKSKPYERVVVAKNMEYVQEVMRAEGVSPWFACGHDEFALCMDGEVTVDFIKMKNPPSTAKNG 102          
BLAST of mRNA_P-wetherbeei_contig51792.1.1 vs. uniprot
Match: A0A512N2U9_9HYPH (Uncharacterized protein n=1 Tax=Reyranella soli TaxID=1230389 RepID=A0A512N2U9_9HYPH)

HSP 1 Score: 176 bits (446), Expect = 1.020e-54
Identity = 82/100 (82.00%), Postives = 94/100 (94.00%), Query Frame = 1
Query:    1 VQVHTVFGSLADHTKGSIELVSGEARHYVFSNIFDVAAKSKPYERVVVAKNLEYVQEVMRAEGVSLWFACGHDEIALCMEGEITVDFIKMAHPPSAAKNG 300
            +QVHTVFGS+ D+TKG+IELVSGEARHYVFSN+F+VAAKS+PYERVVVA+N+EYVQEVMRA+GVS WFACGHDE ALCM+GEITVDFI+M  PPSA KNG
Sbjct:    1 MQVHTVFGSITDYTKGTIELVSGEARHYVFSNVFEVAAKSRPYERVVVARNMEYVQEVMRADGVSPWFACGHDEFALCMDGEITVDFIRMKVPPSADKNG 100          
BLAST of mRNA_P-wetherbeei_contig51792.1.1 vs. uniprot
Match: A0A537N602_9PROT (Hydroxyquinol 1,2-dioxygenase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537N602_9PROT)

HSP 1 Score: 176 bits (445), Expect = 1.490e-54
Identity = 81/99 (81.82%), Postives = 91/99 (91.92%), Query Frame = 1
Query:    4 QVHTVFGSLADHTKGSIELVSGEARHYVFSNIFDVAAKSKPYERVVVAKNLEYVQEVMRAEGVSLWFACGHDEIALCMEGEITVDFIKMAHPPSAAKNG 300
            Q HTVFGSL D+TKG+IELVSGEARHYVFSNIF+VA+K++PYER+VV KNLEYVQEVMRAEGVS WFAC HDE ALCM+GE+TVDFI+M HPP AAKNG
Sbjct:    3 QAHTVFGSLKDYTKGTIELVSGEARHYVFSNIFEVASKAQPYERIVVGKNLEYVQEVMRAEGVSPWFACAHDEFALCMDGEVTVDFIRMKHPPGAAKNG 101          
BLAST of mRNA_P-wetherbeei_contig51792.1.1 vs. uniprot
Match: A0A1Q8IYQ7_9BURK (Hydroxyquinol 1,2-dioxygenase n=3 Tax=Burkholderiaceae TaxID=119060 RepID=A0A1Q8IYQ7_9BURK)

HSP 1 Score: 136 bits (343), Expect = 5.260e-39
Identity = 64/100 (64.00%), Postives = 79/100 (79.00%), Query Frame = 1
Query:    4 QVHTVFGSLADHTKGSIELVSGEARHYVFSNIFDVAAKSKPYERVVVAKNLEYVQEVMRAEGVSLWFACGHDEIALCMEGEITVDFIKMAHPPSAAKNGT 303
            Q HTVFGSL  + KG IE+ +G+ARHYVFSN+F+VAAKS PYE+VVV KNL+YV EV+R EG S WFAC HDE A+ M+GE+ +DFIK+  PP +  NGT
Sbjct:    5 QFHTVFGSLDGYRKGEIEITTGDARHYVFSNVFEVAAKSAPYEKVVVGKNLDYVIEVLRTEGQSPWFACAHDEFAIQMDGEVRIDFIKLDTPPQSG-NGT 103          
BLAST of mRNA_P-wetherbeei_contig51792.1.1 vs. uniprot
Match: A0A0A6QEI0_9BURK (Hydroxyquinol 1,2-dioxygenase n=8 Tax=Paraburkholderia TaxID=1822464 RepID=A0A0A6QEI0_9BURK)

HSP 1 Score: 135 bits (341), Expect = 9.970e-39
Identity = 61/91 (67.03%), Postives = 75/91 (82.42%), Query Frame = 1
Query:   10 HTVFGSLADHTKGSIELVSGEARHYVFSNIFDVAAKSKPYERVVVAKNLEYVQEVMRAEGVSLWFACGHDEIALCMEGEITVDFIKMAHPP 282
            HTVFGSL  + KG IE+ SG+ARHYVFSN+F+VAA+S PYE+VVV KNLEYV EV+R EG S WFAC HDE A+ M+GE+ +DFIK+ +PP
Sbjct:    7 HTVFGSLEQYRKGEIEITSGDARHYVFSNVFEVAAQSAPYEKVVVGKNLEYVIEVLRTEGQSRWFACAHDEFAILMDGEMRIDFIKLDNPP 97          
BLAST of mRNA_P-wetherbeei_contig51792.1.1 vs. uniprot
Match: A0A2N8QE45_9BURK (Hydroxyquinol 1,2-dioxygenase n=5 Tax=Paraburkholderia TaxID=1822464 RepID=A0A2N8QE45_9BURK)

HSP 1 Score: 134 bits (336), Expect = 5.730e-38
Identity = 60/95 (63.16%), Postives = 75/95 (78.95%), Query Frame = 1
Query:   10 HTVFGSLADHTKGSIELVSGEARHYVFSNIFDVAAKSKPYERVVVAKNLEYVQEVMRAEGVSLWFACGHDEIALCMEGEITVDFIKMAHPPSAAK 294
            HT+FGSL  + KG IE+ SG ARHY FSNIF+VA++S PYE+VVV KNLEYV EV+R EG S WFAC HDE A+ M+GE+ +DFIK+  PP+A +
Sbjct:    7 HTIFGSLESYHKGEIEITSGSARHYAFSNIFEVASQSTPYEKVVVGKNLEYVIEVLRTEGRSAWFACAHDEFAILMDGEVQIDFIKLDTPPAAGQ 101          
BLAST of mRNA_P-wetherbeei_contig51792.1.1 vs. uniprot
Match: A0A1B4EXD5_9BURK (Hydroxyquinol 1,2-dioxygenase n=28 Tax=Burkholderia TaxID=32008 RepID=A0A1B4EXD5_9BURK)

HSP 1 Score: 133 bits (334), Expect = 1.150e-37
Identity = 57/95 (60.00%), Postives = 75/95 (78.95%), Query Frame = 1
Query:   10 HTVFGSLADHTKGSIELVSGEARHYVFSNIFDVAAKSKPYERVVVAKNLEYVQEVMRAEGVSLWFACGHDEIALCMEGEITVDFIKMAHPPSAAK 294
            HTVFGSL  HTKG IE+ SG A+HY FSN+F++A+KS PYE+VV  KNLEYV EV+R +G S WFAC HDE A+ M+GE+ ++FIK+ +PP+  +
Sbjct:    7 HTVFGSLDSHTKGEIEITSGSAKHYAFSNVFEIASKSAPYEKVVAGKNLEYVIEVLRTDGQSPWFACAHDEFAIQMDGEVRIEFIKLDNPPTTGR 101          
BLAST of mRNA_P-wetherbeei_contig51792.1.1 vs. uniprot
Match: UPI00155D5728 (hydroxyquinol 1,2-dioxygenase n=1 Tax=Achromobacter anxifer TaxID=1287737 RepID=UPI00155D5728)

HSP 1 Score: 133 bits (334), Expect = 1.150e-37
Identity = 61/93 (65.59%), Postives = 74/93 (79.57%), Query Frame = 1
Query:   13 TVFGSLADHTKGSIELVSGEARHYVFSNIFDVAAKSKPYERVVVAKNLEYVQEVMRAEGVSLWFACGHDEIALCMEGEITVDFIKMAHPPSAA 291
            TVFGSL D+ KGSIE+  G  RHYVFSNIF+VAA S PYE+VVV KNLEYV E +RAEGVS W+AC HDE A+ M+G++ VDF+ +  PP+AA
Sbjct:    8 TVFGSLNDYRKGSIEITQGSPRHYVFSNIFEVAANSAPYEKVVVGKNLEYVIETLRAEGVSPWYACSHDEFAIVMDGQVQVDFLALEQPPAAA 100          
BLAST of mRNA_P-wetherbeei_contig51792.1.1 vs. uniprot
Match: UPI0012DCE779 (hydroxyquinol 1,2-dioxygenase n=4 Tax=Burkholderia multivorans TaxID=87883 RepID=UPI0012DCE779)

HSP 1 Score: 132 bits (331), Expect = 3.290e-37
Identity = 58/95 (61.05%), Postives = 74/95 (77.89%), Query Frame = 1
Query:   10 HTVFGSLADHTKGSIELVSGEARHYVFSNIFDVAAKSKPYERVVVAKNLEYVQEVMRAEGVSLWFACGHDEIALCMEGEITVDFIKMAHPPSAAK 294
            HTVFGSL  +T+G IE+ SG A+HY FSNIFD+A+KS PYE+VV  KNLEYV EV+R EG S WFAC HDE A+ M+GE+ ++FIK+  PP+  +
Sbjct:    7 HTVFGSLDSYTRGEIEITSGSAKHYAFSNIFDIASKSAPYEKVVAGKNLEYVIEVLRTEGESPWFACAHDEFAIQMDGEVRIEFIKLDSPPTTGR 101          
BLAST of mRNA_P-wetherbeei_contig51792.1.1 vs. uniprot
Match: A0A1B4P031_9BURK (Hydroxyquinol 1,2-dioxygenase n=46 Tax=Burkholderiaceae TaxID=119060 RepID=A0A1B4P031_9BURK)

HSP 1 Score: 131 bits (330), Expect = 4.660e-37
Identity = 57/95 (60.00%), Postives = 76/95 (80.00%), Query Frame = 1
Query:   10 HTVFGSLADHTKGSIELVSGEARHYVFSNIFDVAAKSKPYERVVVAKNLEYVQEVMRAEGVSLWFACGHDEIALCMEGEITVDFIKMAHPPSAAK 294
            HTVFGSL  +T+G IE+ SG A+HY FSN+FD+A+KS PYE+VV  KNLEYV EV+R +G S WFAC HDE A+ M+GE+ ++FIK+ +PP+A +
Sbjct:    7 HTVFGSLDCYTRGDIEITSGSAKHYAFSNVFDIASKSAPYEKVVAGKNLEYVIEVLRTDGESPWFACAHDEFAIQMDGEVRIEFIKLDNPPAAGR 101          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig51792.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A7LY65_9PROT5.920e-5989.00Hydroxyquinol 1,2-dioxygenase n=1 Tax=Rhodospirill... [more]
A0A512N2U9_9HYPH1.020e-5482.00Uncharacterized protein n=1 Tax=Reyranella soli Ta... [more]
A0A537N602_9PROT1.490e-5481.82Hydroxyquinol 1,2-dioxygenase n=1 Tax=Alphaproteob... [more]
A0A1Q8IYQ7_9BURK5.260e-3964.00Hydroxyquinol 1,2-dioxygenase n=3 Tax=Burkholderia... [more]
A0A0A6QEI0_9BURK9.970e-3967.03Hydroxyquinol 1,2-dioxygenase n=8 Tax=Paraburkhold... [more]
A0A2N8QE45_9BURK5.730e-3863.16Hydroxyquinol 1,2-dioxygenase n=5 Tax=Paraburkhold... [more]
A0A1B4EXD5_9BURK1.150e-3760.00Hydroxyquinol 1,2-dioxygenase n=28 Tax=Burkholderi... [more]
UPI00155D57281.150e-3765.59hydroxyquinol 1,2-dioxygenase n=1 Tax=Achromobacte... [more]
UPI0012DCE7793.290e-3761.05hydroxyquinol 1,2-dioxygenase n=4 Tax=Burkholderia... [more]
A0A1B4P031_9BURK4.660e-3760.00Hydroxyquinol 1,2-dioxygenase n=46 Tax=Burkholderi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig51792contigP-wetherbeei_contig51792:247..549 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog159450.NH14_07785
Model size303
Max annot lvl28216|Betaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.64e-39
EggNOG OGs28PSM@1|root,2ZCE4@2|Bacteria,1RBR6@1224|Proteobacteria,2VQIJ@28216|Betaproteobacteria,1K3P8@119060|Burkholderiaceae
Cds size303
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186777.2371728-CDS-P-wetherbeei_contig51792:246..5491683186777.2371728-CDS-P-wetherbeei_contig51792:246..549Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig51792 247..549 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig51792.1.1prot_P-wetherbeei_contig51792.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig51792 247..549 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig51792.1.1

>prot_P-wetherbeei_contig51792.1.1 ID=prot_P-wetherbeei_contig51792.1.1|Name=mRNA_P-wetherbeei_contig51792.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=101bp
VQVHTVFGSLADHTKGSIELVSGEARHYVFSNIFDVAAKSKPYERVVVAK
NLEYVQEVMRAEGVSLWFACGHDEIALCMEGEITVDFIKMAHPPSAAKNG
T
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mRNA from alignment at P-wetherbeei_contig51792:247..549+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig51792.1.1 ID=mRNA_P-wetherbeei_contig51792.1.1|Name=mRNA_P-wetherbeei_contig51792.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=303bp|location=Sequence derived from alignment at P-wetherbeei_contig51792:247..549+ (Phaeothamnion wetherbeei SAG_119_79)
GTGCAGGTTCATACCGTCTTCGGGTCGCTTGCGGACCACACGAAAGGCAG CATCGAACTGGTGTCCGGCGAAGCCCGGCACTACGTGTTCTCCAACATCT TCGATGTTGCTGCCAAATCGAAACCCTACGAACGCGTCGTCGTCGCCAAG AACCTGGAGTACGTCCAGGAGGTCATGCGCGCGGAGGGCGTTTCGCTGTG GTTCGCCTGCGGCCATGACGAGATCGCGCTGTGCATGGAAGGCGAGATTA CCGTCGACTTCATCAAGATGGCGCATCCACCGAGTGCGGCCAAGAACGGC ACG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig51792:247..549+

>mRNA_P-wetherbeei_contig51792.1.1 ID=mRNA_P-wetherbeei_contig51792.1.1|Name=mRNA_P-wetherbeei_contig51792.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=303bp|location=Sequence derived from alignment at P-wetherbeei_contig51792:247..549+ (Phaeothamnion wetherbeei SAG_119_79)
GTGCAGGTTCATACCGTCTTCGGGTCGCTTGCGGACCACACGAAAGGCAG
CATCGAACTGGTGTCCGGCGAAGCCCGGCACTACGTGTTCTCCAACATCT
TCGATGTTGCTGCCAAATCGAAACCCTACGAACGCGTCGTCGTCGCCAAG
AACCTGGAGTACGTCCAGGAGGTCATGCGCGCGGAGGGCGTTTCGCTGTG
GTTCGCCTGCGGCCATGACGAGATCGCGCTGTGCATGGAAGGCGAGATTA
CCGTCGACTTCATCAAGATGGCGCATCCACCGAGTGCGGCCAAGAACGGC
ACG
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