mRNA_P-wetherbeei_contig51791.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig51791.1.1 vs. uniprot
Match: A0A7X9KLH1_9ACTN (Metal-sensitive transcriptional regulator n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A7X9KLH1_9ACTN) HSP 1 Score: 162 bits (409), Expect = 5.700e-50 Identity = 81/96 (84.38%), Postives = 89/96 (92.71%), Query Frame = 1
Query: 13 HATPGYSADKQQLIGRLRRIEGQVRGLQRLVESDTYCIDVLTQVAAVSKALQSVGVQLLDEHLQHCVAGAAASGDAERTEALVHEATRAVERLLRA 300
HATPGYSA+KQQ+I RL+RIEGQVRGLQRL++ DTYCIDVLTQVAAVSKALQ VG+ LLDEHLQHCVAGAAASGD +RT LVHEAT+AVERLLRA
Sbjct: 2 HATPGYSAEKQQVIARLKRIEGQVRGLQRLIDEDTYCIDVLTQVAAVSKALQGVGLHLLDEHLQHCVAGAAASGDTDRTTELVHEATKAVERLLRA 97
BLAST of mRNA_P-wetherbeei_contig51791.1.1 vs. uniprot
Match: A0A6I3X080_9ACTN (Metal-sensing transcriptional repressor n=2 Tax=root TaxID=1 RepID=A0A6I3X080_9ACTN) HSP 1 Score: 157 bits (396), Expect = 6.790e-48 Identity = 79/96 (82.29%), Postives = 88/96 (91.67%), Query Frame = 1
Query: 13 HATPGYSADKQQLIGRLRRIEGQVRGLQRLVESDTYCIDVLTQVAAVSKALQSVGVQLLDEHLQHCVAGAAASGDAERTEALVHEATRAVERLLRA 300
HATPGY DK+Q++ RLRRIEGQVRGLQRLV+ DTYCIDVLTQVAAVSKALQ VGV LLDEHL+HCVAGAAA+GDA RT+ LVHEAT+AVER+LRA
Sbjct: 9 HATPGYHDDKKQVLARLRRIEGQVRGLQRLVDEDTYCIDVLTQVAAVSKALQGVGVLLLDEHLRHCVAGAAAAGDAARTDELVHEATKAVERMLRA 104
BLAST of mRNA_P-wetherbeei_contig51791.1.1 vs. uniprot
Match: A0A7K1BA76_9ACTN (Metal-sensing transcriptional repressor n=2 Tax=root TaxID=1 RepID=A0A7K1BA76_9ACTN) HSP 1 Score: 152 bits (385), Expect = 2.450e-46 Identity = 78/93 (83.87%), Postives = 84/93 (90.32%), Query Frame = 1
Query: 22 PGYSADKQQLIGRLRRIEGQVRGLQRLVESDTYCIDVLTQVAAVSKALQSVGVQLLDEHLQHCVAGAAASGDAERTEALVHEATRAVERLLRA 300
PGY DKQQLI RL+RIEGQVRGLQRL+E DTYCIDVLTQ+AAVSK LQ VGVQLLDEHLQHCVAGAAASGD+ RT LVHEAT+AVERLLR+
Sbjct: 3 PGYHGDKQQLILRLKRIEGQVRGLQRLIEDDTYCIDVLTQLAAVSKGLQGVGVQLLDEHLQHCVAGAAASGDSARTTELVHEATKAVERLLRS 95
BLAST of mRNA_P-wetherbeei_contig51791.1.1 vs. uniprot
Match: A0A539DUC0_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A539DUC0_9ACTN) HSP 1 Score: 153 bits (386), Expect = 2.490e-46 Identity = 77/100 (77.00%), Postives = 86/100 (86.00%), Query Frame = 1
Query: 1 GTTAHATPGYSADKQQLIGRLRRIEGQVRGLQRLVESDTYCIDVLTQVAAVSKALQSVGVQLLDEHLQHCVAGAAASGDAERTEALVHEATRAVERLLRA 300
G TPGY DKQ+LI RL+RIEGQVRGLQR+++ DTYCIDVLTQ+AAVSK LQ VG+QLLDEHLQHCVAGAAASGD ERT LVHEATRAV+RLLR+
Sbjct: 8 GYAGKVTPGYHGDKQKLITRLKRIEGQVRGLQRMIDDDTYCIDVLTQLAAVSKGLQGVGLQLLDEHLQHCVAGAAASGDRERTGELVHEATRAVDRLLRS 107
BLAST of mRNA_P-wetherbeei_contig51791.1.1 vs. uniprot
Match: A0A3C2AYG7_9ACTN (Transcriptional regulator n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2AYG7_9ACTN) HSP 1 Score: 137 bits (345), Expect = 3.070e-40 Identity = 70/95 (73.68%), Postives = 82/95 (86.32%), Query Frame = 1
Query: 13 HATPGYSADKQQLIGRLRRIEGQVRGLQRLVESDTYCIDVLTQVAAVSKALQSVGVQLLDEHLQHCVAGAAASGDAERTEALVHEATRAVERLLR 297
H TPGY DK +++ RL+RIEGQVRGLQR+V+ +TYCIDVLTQ+AA +KALQSVG+ LL+EHLQHCVAGAAA G ERT+ LV EATRAVERLLR
Sbjct: 2 HGTPGYHDDKAKVLARLKRIEGQVRGLQRMVDEETYCIDVLTQLAATTKALQSVGLHLLEEHLQHCVAGAAADG--ERTDELVSEATRAVERLLR 94
BLAST of mRNA_P-wetherbeei_contig51791.1.1 vs. uniprot
Match: A0A7K0VJA7_9ACTN (Metal-sensing transcriptional repressor (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7K0VJA7_9ACTN) HSP 1 Score: 128 bits (322), Expect = 6.700e-37 Identity = 63/81 (77.78%), Postives = 70/81 (86.42%), Query Frame = 1
Query: 19 TPGYSADKQQLIGRLRRIEGQVRGLQRLVESDTYCIDVLTQVAAVSKALQSVGVQLLDEHLQHCVAGAAASGDAERTEALV 261
TPGY DK Q++ RLRR+EGQVRGLQRL+E DTYCIDVLTQVAA SKALQ VG+ LLDEHL+HCV GAAASGD+ RTE LV
Sbjct: 2 TPGYHDDKTQVLARLRRVEGQVRGLQRLIEDDTYCIDVLTQVAAASKALQGVGLLLLDEHLRHCVVGAAASGDSTRTEELV 82
BLAST of mRNA_P-wetherbeei_contig51791.1.1 vs. uniprot
Match: A0A6N2DR04_9ACTN (Metal-sensitive transcriptional regulator n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A6N2DR04_9ACTN) HSP 1 Score: 122 bits (306), Expect = 3.110e-34 Identity = 61/97 (62.89%), Postives = 76/97 (78.35%), Query Frame = 1
Query: 10 AHATPGYSADKQQLIGRLRRIEGQVRGLQRLVESDTYCIDVLTQVAAVSKALQSVGVQLLDEHLQHCVAGAAASGDAERTEALVHEATRAVERLLRA 300
A TPGY DK ++ RLRR+EGQVRGLQR+VE DTYCIDVLTQVAA + ALQSV V+L+DEHL+HCVAGAA + D + EA+RA+ERL+++
Sbjct: 4 ADVTPGYHDDKAAILTRLRRVEGQVRGLQRMVEDDTYCIDVLTQVAAATSALQSVAVKLVDEHLRHCVAGAAEADDPAEMATKLAEASRAIERLVKS 100
BLAST of mRNA_P-wetherbeei_contig51791.1.1 vs. uniprot
Match: A0A838SX91_9ACTN (Metal-sensitive transcriptional regulator n=1 Tax=Euzebyales bacterium TaxID=2740540 RepID=A0A838SX91_9ACTN) HSP 1 Score: 120 bits (302), Expect = 1.060e-33 Identity = 59/92 (64.13%), Postives = 74/92 (80.43%), Query Frame = 1
Query: 25 GYSADKQQLIGRLRRIEGQVRGLQRLVESDTYCIDVLTQVAAVSKALQSVGVQLLDEHLQHCVAGAAASGDAERTEALVHEATRAVERLLRA 300
GY+ +K + RLRR+EGQ+RGLQRLV+ DTYCIDVLTQVAA +KAL SV V LLDEH++HCV AA SGD R + ++ EATRA+ERL++A
Sbjct: 3 GYTQNKDDYLKRLRRVEGQIRGLQRLVDEDTYCIDVLTQVAAATKALHSVAVGLLDEHMRHCVREAATSGDDARADEMIAEATRAIERLVKA 94
BLAST of mRNA_P-wetherbeei_contig51791.1.1 vs. uniprot
Match: A0A7K0A8H9_9ACTN (Metal-sensing transcriptional repressor n=2 Tax=Actinomycetia TaxID=1760 RepID=A0A7K0A8H9_9ACTN) HSP 1 Score: 120 bits (301), Expect = 1.510e-33 Identity = 60/92 (65.22%), Postives = 74/92 (80.43%), Query Frame = 1
Query: 25 GYSADKQQLIGRLRRIEGQVRGLQRLVESDTYCIDVLTQVAAVSKALQSVGVQLLDEHLQHCVAGAAASGDAERTEALVHEATRAVERLLRA 300
GYS K+ + RLRRIEGQVRGLQRL+ DTYCIDVL QVAAV++ALQSV V LLDEH++HCV+ AA D + +A+V EATRA+ERL++A
Sbjct: 3 GYSISKEDYLKRLRRIEGQVRGLQRLINEDTYCIDVLNQVAAVNRALQSVAVGLLDEHVRHCVSDAAKGEDRDHADAMVTEATRAIERLIKA 94
BLAST of mRNA_P-wetherbeei_contig51791.1.1 vs. uniprot
Match: A0A838HTJ0_9ACTN (Metal-sensitive transcriptional regulator n=1 Tax=Euzebyaceae bacterium TaxID=2740542 RepID=A0A838HTJ0_9ACTN) HSP 1 Score: 119 bits (299), Expect = 3.040e-33 Identity = 59/92 (64.13%), Postives = 73/92 (79.35%), Query Frame = 1
Query: 25 GYSADKQQLIGRLRRIEGQVRGLQRLVESDTYCIDVLTQVAAVSKALQSVGVQLLDEHLQHCVAGAAASGDAERTEALVHEATRAVERLLRA 300
GY+ +K + RLRR+EGQVRGLQRLV+ D YCIDVLTQVAA +KALQSV V LLDEH++HCV A A GD R + ++ EATRA+ERL++A
Sbjct: 3 GYTINKDDYLKRLRRVEGQVRGLQRLVDEDAYCIDVLTQVAAATKALQSVAVGLLDEHVRHCVREAVAGGDRARADEMITEATRAIERLVKA 94 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig51791.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig51791.1.1 >prot_P-wetherbeei_contig51791.1.1 ID=prot_P-wetherbeei_contig51791.1.1|Name=mRNA_P-wetherbeei_contig51791.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=101bp GTTAHATPGYSADKQQLIGRLRRIEGQVRGLQRLVESDTYCIDVLTQVAAback to top mRNA from alignment at P-wetherbeei_contig51791:22..324- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig51791.1.1 ID=mRNA_P-wetherbeei_contig51791.1.1|Name=mRNA_P-wetherbeei_contig51791.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=303bp|location=Sequence derived from alignment at P-wetherbeei_contig51791:22..324- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig51791:22..324- >mRNA_P-wetherbeei_contig51791.1.1 ID=mRNA_P-wetherbeei_contig51791.1.1|Name=mRNA_P-wetherbeei_contig51791.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=303bp|location=Sequence derived from alignment at P-wetherbeei_contig51791:22..324- (Phaeothamnion wetherbeei SAG_119_79)back to top |