prot_P-wetherbeei_contig5179.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig5179.1.1
Unique Nameprot_P-wetherbeei_contig5179.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length360
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5179.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 188..220
e-value: 260.0
score: 8.5
coord: 78..109
e-value: 100.0
score: 11.6
coord: 227..259
e-value: 0.0026
score: 27.0
coord: 152..183
e-value: 620.0
score: 5.5
coord: 41..73
e-value: 5.0
score: 16.1
coord: 110..147
e-value: 670.0
score: 5.2
coord: 264..295
e-value: 0.97
score: 18.5
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 3..312
e-value: 3.4E-29
score: 101.8
IPR003690Transcription termination factor, mitochondrial/chloroplasticPANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 2..100
coord: 69..286
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10Transcription termination factor 3, mitochondrialcoord: 135..319
e-value: 9.9E-30
score: 105.5
coord: 1..134
e-value: 3.7E-15
score: 57.8
NoneNo IPR availablePANTHERPTHR13068:SF5TRANSCRIPTION TERMINATION FACTOR MTERF6, CHLOROPLASTIC/MITOCHONDRIALcoord: 2..100
coord: 69..286

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5179contigP-wetherbeei_contig5179:1577..2855 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5179.1.1mRNA_P-wetherbeei_contig5179.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig5179 1275..2986 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig5179.1.1 ID=prot_P-wetherbeei_contig5179.1.1|Name=mRNA_P-wetherbeei_contig5179.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=360bp
MLIRQPSIMGSSIDNAFRPMAALLRADPAVGGLGLSQRELKVVVIREPSV
LALSLESNVAPKIAAFRREVGATPAELRSAILASPNLLTCSLERRVLPRI
ATMREGGVMPRTVRRVFRLLMYSETNFARWLQTRLRTTLFLEELGVTARD
LRLMRRRHRLLLSLSVATISRTAAFLRDGVGLSPPELRRVIVRFPQVLGC
SPKALAAKRAFCVDGDNGLGLDDDGLRAVVLAQPSLLGLSVEGNLEPKVK
LLCREMGATVAELRVAVLANPSLLEYSLERRIRPRLLSMREAGLPVRIGS
VRQVCKLTDIAFDRWLVAARGGFVRHTAYVAPLGATPSAAAVDAAGVAAA
GAALGGIEC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003690MTERF
IPR038538MTERF_sf