mRNA_P-wetherbeei_contig1231.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1231.1.1 vs. uniprot
Match: D7G5C5_ECTSI (DUF1394 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5C5_ECTSI) HSP 1 Score: 268 bits (686), Expect = 4.800e-85 Identity = 158/307 (51.47%), Postives = 200/307 (65.15%), Query Frame = 2 Query: 116 MGNLLGI-YQDGYVGYNLSINMEVEEGVGE-------CPEDVVGGEDAELYADLCALVEAGRAALLQLQSYRGCSEVIRASMSSPRNMAVQREAFATLARNAEAIKGFYALAQRLQGLAPALLRRLAALPVTAGGTGIGERPSLVRKTADVLELVLDWDQAKMMHPQVQNDFAYYRRLLPKMVNEPAAAAA---PVSDTDANVISMFIAENVPLTVTLAAATADTARRTDGVARVVATVANMCCGMVHRGIYSSEAINRKLLMAMTGAVVLYDRITDQGVFVKASGVGVSKCIKVLHKHGGQTGEQL 1003 MGNL+G+ ++DG+ GY +S+ V+EG P+D +D ELY LC +VE A+ +Q Y GCS +IR SMS+P++ +Q L N + IK F+ LA+ ++ LAPALL RLA L I E P L ++L+ VL+WDQ KMM PQVQNDFA YRR L ++ E A PV+DTDAN ISMFIAENVP+ V L+ TA TA V V+ATVANMCCGMVHR ++++A +RKLLMAMT A VLYDRITD GVFV+ S +GVSKCIKVL++HGG TGEQL Sbjct: 1 MGNLMGLLWRDGHAGYEISLPPLVDEGSERGQQRPKGSPKDGQERQDGELYLQLCLVVERCSDAIQSVQQYEGCSALIRQSMSAPKDTELQSAVTEALLPNVKKIKTFFDLARDVEQLAPALLGRLAGLG------SIVEAPLLACMLTELLQAVLEWDQIKMMRPQVQNDFATYRRYLSRLKREQEAGLLLELPVADTDANAISMFIAENVPMMVMLSKVTAKTAEEVPRVQNVIATVANMCCGMVHRRAHTNDATSRKLLMAMTSAAVLYDRITDSGVFVRRSHIGVSKCIKVLNRHGGATGEQL 301
BLAST of mRNA_P-wetherbeei_contig1231.1.1 vs. uniprot
Match: A0A835YT34_9STRA (DUF1394 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT34_9STRA) HSP 1 Score: 154 bits (389), Expect = 6.560e-41 Identity = 107/251 (42.63%), Postives = 141/251 (56.18%), Query Frame = 2 Query: 281 ALLQLQSYRGCSEVIRASMSSPRNMAVQREAFATLARNAEAIKGFYALAQRLQGLAPALLRRLAALPVTAGGT-----GIGERPSLVRKTADVLELVLDWDQAKMMHPQVQNDFAYYRRLLPKMV--NEPAAAAAPVSDTDANVISMFIAENVPLTVTLAAATAD--TARRTDGVARVVATVANMCCGMVHRGI-YSSEAINRKLLMAMTGAVVLYDRITDQGVFVKASGVGVSKCIKVLHKHGGQTGEQL 1003 AL + +Y GC++VIR SMS+P + + QR AF L N + I +A +Q L GG + E + + + D + Q+QNDFA+Y+RL+P+MV ++ VSD A ISMFIAEN+PLTV L+ A D TA RT A ++A VAN+CCG V R Y +A R+LL+ MT AVVLYDRIT +GVF + GVGVS+CIKVL+KHGG G QL Sbjct: 41 ALEAVNAYTGCADVIRHSMSAPGDHSAQRAAFDALLPNVDRIASLHATSQASSS---------EKLVGYGGGEHFHFFAVEEMRGVCAPSYTLQRTHFDHYDRLVTLSQIQNDFAFYKRLMPRMVASSDYTLEQLTVSDRHAGTISMFIAENMPLTVALSTALRDNTTASRT---ANIIAQVANLCCGTVARADGYRQDATLRQLLLGMTSAVVLYDRITIEGVFARGGGVGVSRCIKVLNKHGGDAGLQL 279
BLAST of mRNA_P-wetherbeei_contig1231.1.1 vs. uniprot
Match: W7TKW8_9STRA (DUF1394 domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKW8_9STRA) HSP 1 Score: 120 bits (300), Expect = 1.090e-27 Identity = 87/272 (31.99%), Postives = 144/272 (52.94%), Query Frame = 2 Query: 179 EVEEGVGECPEDVVGGEDAELYADLCALVEAGRAALLQLQSYRGCSEVIRASMSSPRNMAVQREAFATLARNAEAIKGFYALAQRLQGLAPALLRRLAALPVTAGGTGIGERPSLVRKTADVLELVLDWDQAKMMHPQVQNDFAYYRRLLPKMVNEPAAAAAPVSDTDANVISMFIAENVPLTVTLAAAT---ADTARRTDGVA---RVVATVANMCCGMVHRGIYSSEAINRKLLMAMTGAVVLYDRITDQGVFVKASGVGVSKCIKVLHK 976 +V G P D V GE +L+ + L++ + ++ Y+ +E++RA+M +P N A+Q +AFA L + IK +AL+ L P LL L A + +L++ AD+L+ L +D KM P +QNDF+Y+RR L KM V + +A +IS+FIA+ +P+TVT+ A + + D + ++V +AN+ C + R + + R L MT +VV+YDR+++ GVF + S V KC+++L K Sbjct: 31 DVTSTAGRTPTDDVQGE--KLHQIMKGLLQESVCCIRAVREYQDNTELLRAAMKAPSNEALQLQAFACLMPSVANIKRAHALSICLSQELPQLLSYL-----IARRNNLRRNHALMKVLADILDFSLSFDFEKMRKPSIQNDFSYFRRYLNKMAPRMPDGEVQVQEAEAGMISLFIAQGLPMTVTVEKALRSLGEVSGSPDSLCHALQLVGLLANVSCDLALRPGLGVD-LRRFALRVMTSSVVIYDRVSEAGVFTRRSPVRTRKCLRILRK 294
BLAST of mRNA_P-wetherbeei_contig1231.1.1 vs. uniprot
Match: A0A0H5QKK4_9EUKA (DUF1394 domain-containing protein n=2 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5QKK4_9EUKA) HSP 1 Score: 113 bits (283), Expect = 1.790e-25 Identity = 72/232 (31.03%), Postives = 124/232 (53.45%), Query Frame = 2 Query: 284 LLQLQSYRGCSEVIRASMSSPRNMAVQREAFATLARNAEAIKGFYALAQRLQGLAPALLRRLAALPVTAGGTGIGERPSLVRKTADVLELVLDWDQAKMMHPQVQNDFAYYRRLLPKMVNEPAAAAAPVSDTDANVISMFIAENVPLTVTLAAATADTARRTDGVARVVATVANMCCGMVHRGIYSSEAINRKLLMAMTGAVVLYDRIT-DQGVFVKASGVGVSKCIKVLHK 976 L L+ Y C IR ++S P A + EAF + +A+ I+ F+ ++ + ++ LL LA + V+K +L VL +D+ KM+HP +QNDF+YYRR+L K N+P + D +A+ IS+++A+ +P+ + A ++ V + + + N+C ++ + SE IN+ L M GA++LYD I+ + G FVK SG+ + K I++ K Sbjct: 48 LQSLERYDNCGTYIRKALSDPHPTA-EMEAFEAVKASADIIRSFFEYSKAVSNISRELLTLLA---TGDEKSAFCSHQLAVKKFCLLLAFVLRFDELKMLHPSIQNDFSYYRRVLAKHTNDPNVK---ILDEEASFISLYVAQPIPMMAAVVKAVSNLYLSNPSVPQSLQLICNVCVDLLESKRFESEDINQLLTRTMVGAIILYDHISLEGGAFVKKSGINIKKAIQLTIK 272
BLAST of mRNA_P-wetherbeei_contig1231.1.1 vs. uniprot
Match: A0A0G4IKW3_PLABS (DUF1394 domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IKW3_PLABS) HSP 1 Score: 110 bits (275), Expect = 2.460e-24 Identity = 70/240 (29.17%), Postives = 129/240 (53.75%), Query Frame = 2 Query: 260 LVEAGRAALLQLQSYRGCSEVIRASMSSPRNMAVQREAFATLARNAEAIKGFYALAQRLQGLAPALLRRLAALPVTAGGTGIGERPSLVRKTADVLELVLDWDQAKMMHPQVQNDFAYYRRLLPKMVNEPAAAAAPVSDTDANVISMFIAENVPLTVTLAAATADTARRTDGVARVVATVANMCCGMVHRGIYSSEAINRKLLMAMTGAVVLYDRIT-DQGVFVKASGVGVSKCIKVLHK 976 ++E + L++Y C IR ++S P N ++EAF + N I F+ ++ + + LL+ LA V++ +L+ VL +D+ KM+ P +QNDF+YYRR+LPK N+P V D +A+ IS++IA+ +P+ LA +T+ V +A +AN+C ++ +++ N+ L+ M G++VL+D ++ + G FVK SG+ + + ++++ K Sbjct: 41 ILERAPGVIAALEAYANCGAQIRKALSDP-NPKSEQEAFQAVKANVAIINMFFNFSKEVANMVRELLKTLA---TGQEKEAFCAHQFSVKQLGRLLDFVLRFDELKMLRPGIQNDFSYYRRVLPKHSNDPDLK---VRDEEASFISLYIAQPIPMMTALAKSTSSLYVSNPNVPAALALMANVCLELLKSKRFTTSETNQLLVRVMVGSIVLFDHVSLEGGAFVKKSGINIKQAVQLVVK 273
BLAST of mRNA_P-wetherbeei_contig1231.1.1 vs. uniprot
Match: A0A0P1AIT5_PLAHL (Uncharacterized conserved protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AIT5_PLAHL) HSP 1 Score: 89.0 bits (219), Expect = 2.280e-16 Identity = 70/262 (26.72%), Postives = 123/262 (46.95%), Query Frame = 2 Query: 236 ELYADLCALVEAGRAALLQLQSYRGCSEVIRASMSSPRNMAVQREAFATLARNAEAIKGFYALAQRLQGLAPALLRRLAALPVTAGGTGIGERPSLVRKTADVLELVLDWDQAKMMHPQVQNDFAYYRRLLP----KMVNEPAAAAAPVSDTDANVISMFIAENVPLTVTLAAATADTARRTDGVARVVATVANMCCGMVHRGIYSSEAINRKLLMAMTGAVVLYDRITDQGVFVKASGVGVSKCIKVL--HKHGGQTGEQL 1003 +L ++ ++ + AL++LQ Y GC ++I+ ++ P+N ++ E L+RN ++ FY LA ++ + AL++ + + T L+ K A +++ + +D K +QND +++RR L K+ + A AP+ N +S F+A++ P+ L A + V A +AN C + L AMTGA++LYD G F S V + +C+K L KH G T E + Sbjct: 61 DLASEADEVISQSKTALVRLQCYEGCLQLIQKTVREPKNENLKTELVNRLSRNITTLRVFYDLATDIETIFVALIQ-ICSQKATKKAAAY-----LIEKIASLVDFAVSFDSLKAKTSDIQNDLSHFRRFLAINAAKLNQLESLADAPL-----NAMSFFVADHCPMLKVLIRAIECAMAKEPAAVDVSAILANSRCACMTSSRPKDGRPMMNFLRAMTGAIILYDHTAVHGAFCSKSEVKIKRCVKELVQGKHNGATLELI 311
BLAST of mRNA_P-wetherbeei_contig1231.1.1 vs. uniprot
Match: A0A7S2WT86_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WT86_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 1.580e-13 Identity = 73/248 (29.44%), Postives = 114/248 (45.97%), Query Frame = 2 Query: 251 LCALVEAGRAALLQLQSYRGCSEVIRASMSSPRNMAVQREAFATLARNAEAIKGFYALAQRLQGLAPALLRRLAALPVTAGGTGIGERPSLVRKTADVLELVLDWDQAKMMHPQVQNDFAYYRRLLPKMVNEPAAAAAPVSDTDANVISMFIAENVPLTVTLAAATADTARRTDGVARVVATVANMCCGMVHRGIYSSEAINRKLLMAMTGAVVLYDRITDQG---VFVKASGVGVSKCIKVLHKHGG 985 L L E AA+ Q++ Y E IR +++ P + + A L N I+ + LA+++ L ++ T + PS + V +DQAKMM P +QNDFA YRR++ K+ + + S T ++SM+IA+ +P VTL +A A +A VAN CCGM+ S + AM A+++YDR+ G VF V + KC+ + + GG Sbjct: 47 LAELFENMEAAMKQIEGYEAKPEPIRQAINIPNDPEIALNAVKALLPNVNMIETWMDLAEKIASAVDDLTKKF------QNKTLEQDVPSAAA-LFKIFAFVWKFDQAKMMQPGIQNDFAGYRRVVSKVPADTPGLSMDESAT--GIVSMWIADMMP--VTLKVVSALNQALPHEAATTIAEVANCCCGMISG---SRTSNTEPYFHAMICAIIIYDRLLLHGGNSVFTSRD-VAIRKCLLTIRRSGG 279
BLAST of mRNA_P-wetherbeei_contig1231.1.1 vs. uniprot
Match: UPI000523A963 (protein FAM49B-like n=1 Tax=Chaetura pelagica TaxID=8897 RepID=UPI000523A963) HSP 1 Score: 62.0 bits (149), Expect = 1.220e-7 Identity = 43/157 (27.39%), Postives = 72/157 (45.86%), Query Frame = 2 Query: 518 SLVRKTADVLELVLDWDQAKMMHPQVQNDFAYYRRLLPK--MVNEPAAAAAPVSDTDANVISMFIAENVPLTVTLAAATADTARRTDGVARVVATVANMCCGMVHRGIYSSEAINRKLLM----AMTGAVVLYDRITDQGVFVKASGVGVSKCIKVL 970 +L ++ A++L L +D+ KM HP +QNDF+YYRR + + + N V + ++N L + + ++T+A +C M+ Y S N + L+ M G ++LYD + G F K S + + CIKVL Sbjct: 33 ALAKQFAEILHFTLSFDELKMTHPAIQNDFSYYRRTISRNRINNLQVRGQCCVPPLAQRWSPLGDSQNKTLPI-------------EDTTDCLSTMACVCRVMLETPEYRSRFTNTETLLFCMRVMVGVIILYDHVHPVGAFAKTSKIDMKGCIKVL 176
BLAST of mRNA_P-wetherbeei_contig1231.1.1 vs. uniprot
Match: A0A662Y2N5_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y2N5_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 3.980e-7 Identity = 50/196 (25.51%), Postives = 94/196 (47.96%), Query Frame = 2 Query: 260 LVEAGRAALLQLQSYRGCSEVIRA------SMSSPRNMAVQREAFATLARNAEAIKGFYALAQRLQGLAPALLRRLAALPVTAGGTGIGERPSLVRKTADVLELVLDWDQAKMMHPQVQNDFAYYRRLLPKMVNEPAAAAAPVSDTDANVISMFIAENVPLTVTLAAATADTARRTDGVARVVATVANMCCGMVHR 829 L+ + AL+++QSY GC ++I+ S+ +P + ++ E A LA N + + Y L+ ++ + AL++ L+A T G L+ + +E + +D K P +QND +++RR++ + A +SD N +S F+A++ P+ L A + + V A +AN C + R Sbjct: 28 LIGQAKNALVRMQSYDGCLQLIQKVCTSPFSICAPNDADLKAELVAKLAPNVDLTRALYELSIDIESIFSALIQ-LSAQKSTKKAAGF-----LMESISSFVEFAVCFDNIKSRKPDIQNDLSHFRRVV-AVSTLAANQLESLSDAPLNAMSFFVADHCPMLKMLIRAVENAMAKEPSAVDVAALLANSRCSSIKR 216
BLAST of mRNA_P-wetherbeei_contig1231.1.1 vs. uniprot
Match: A0A1V9ZMA0_9STRA (FAM49A-like isoform X2 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZMA0_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 1.540e-6 Identity = 46/173 (26.59%), Postives = 84/173 (48.55%), Query Frame = 2 Query: 503 IGERPSLVRKTADVLELVLDWDQAKMMHPQVQNDFAYYRR-LLPKMVNEPAAAAAPVSDTDANVISMFIAENVPLTVTLAAATADTARRTDG----------VARVV------ATVANMCCGMVHRGIYSSEAINRKLLMAMTGAVVLYDRITDQGVFVKASGVGVSKCIKVL 970 I + P L+R+ AD+ L +D K P VQND ++YRR L+P N+ + + ++ AN +S+F+AE++P+ LA A A +++ + RV AT + M + +E + + AM ++++ D +G S + ++KC++VL Sbjct: 42 IDDHPELIRRVADICISALLFDSLKATQPGVQNDVSFYRRYLIPSTDNQVTS----IKESQANALSLFLAEHMPIVKGLARAVAAVCHQSEQGLSPSWPMSPMLRVQLYIPARATAPTILRAMTVPPLSPAEELY--CMRAMAASILVLDHALPKGALRARSAININKCLRVL 208 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1231.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1231.1.1 >prot_P-wetherbeei_contig1231.1.1 ID=prot_P-wetherbeei_contig1231.1.1|Name=mRNA_P-wetherbeei_contig1231.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=296bp MGNLLGIYQDGYVGYNLSINMEVEEGVGECPEDVVGGEDAELYADLCALVback to top mRNA from alignment at P-wetherbeei_contig1231:3..2548- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1231.1.1 ID=mRNA_P-wetherbeei_contig1231.1.1|Name=mRNA_P-wetherbeei_contig1231.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2546bp|location=Sequence derived from alignment at P-wetherbeei_contig1231:3..2548- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1231:3..2548- >mRNA_P-wetherbeei_contig1231.1.1 ID=mRNA_P-wetherbeei_contig1231.1.1|Name=mRNA_P-wetherbeei_contig1231.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=888bp|location=Sequence derived from alignment at P-wetherbeei_contig1231:3..2548- (Phaeothamnion wetherbeei SAG_119_79)back to top |