mRNA_P-wetherbeei_contig12201.2.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12201.2.2 vs. uniprot
Match: D8LTI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTI6_ECTSI) HSP 1 Score: 143 bits (360), Expect = 5.770e-34 Identity = 97/242 (40.08%), Postives = 117/242 (48.35%), Query Frame = 2 Query: 515 TRSGTGGMQAALLPRSDLAERLRNGDGDDATTTRGLLPRIAEFYAG--------------GTANVSGG----------WSPWPKR---------VPAPAAPLANGAYVQLVSPAATHVSQRDAGGAQWSCGYRNIQMLCSTLMALPPMAAVLFDGAVALATAGGAAAPATGASGGGLGKVPGVLGLQQWIEAAWAEGFDPEGCEQLGGRGALAGSTTWIGATECATLLRFFGIRAEVIDFEA 1141 T G+ G + + R++L R GD +TT GL+PRI E G G GG W + A A A +L H +QR + G+ +SCGYRNIQMLCS LM P VLF GG G +PGV LQ WIE AWA+G+DP+GC QLGG GAL GS TWIGATECATLLR FG++AEVIDFE+ Sbjct: 15 TTGGSIGGSSLVPTRAELKARTVAAGGDRLSTTPGLIPRIHERLLGEHNARGSGRGGGVRGNTTTGGGSLGVRERQTFMRGWGRGGFDMSVTSDFAGGGARAATAAEWRLCDQRTKHCTQRGSHGSGFSCGYRNIQMLCSALMEWPEYKRVLF---------------------GGSGCIPGVALLQCWIERAWADGYDPDGCAQLGGLGALMGSETWIGATECATLLRSFGVKAEVIDFES 235
BLAST of mRNA_P-wetherbeei_contig12201.2.2 vs. uniprot
Match: A0A7S4DCM4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCM4_HETAK) HSP 1 Score: 110 bits (276), Expect = 1.250e-25 Identity = 65/124 (52.42%), Postives = 74/124 (59.68%), Query Frame = 2 Query: 770 SQR-DAGGAQWSCGYRNIQMLCSTLMALPPMAAVLFDGAVALATAGGAAAPATGASGGGLGKVPGVLGLQQWIEAAWAEGFDPEGCEQLGGRGALAGSTTWIGATECATLLRFFGIRAEVIDFE 1138 SQR A G QWSCGYRNIQMLC L+ P VLF+GA A GAAA + PGV LQ W+E AWA GFDP G G G +AG WIGATE LLR FG+RA+V+DF+ Sbjct: 2 SQRTQAEGLQWSCGYRNIQMLCDALLRRPEYRRVLFEGAYARP---GAAA-----------RAPGVRALQGWLERAWALGFDPAGAALFPG-GRVAGGEAWIGATEAVALLRSFGVRAQVVDFD 110
BLAST of mRNA_P-wetherbeei_contig12201.2.2 vs. uniprot
Match: A0A2P6TIH3_CHLSO (Zinc finger-containing ubiquitin peptidase 1 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TIH3_CHLSO) HSP 1 Score: 102 bits (255), Expect = 5.750e-20 Identity = 56/114 (49.12%), Postives = 67/114 (58.77%), Query Frame = 2 Query: 797 WSCGYRNIQMLCSTLMALPPMA-AVLFDGAVALATAGGAAAPATGASGGGLGKVPGVLGLQQWIEAAWAEGFDPEGCEQLGGRGALAGSTTWIGATECATLLRFFGIRAEVIDF 1135 W CGY NIQMLCS L+A P A A LF GG G VP + LQ W+EAAW G+DP+G EQLG R + G+ WIG+TE A LLRFFG+RA++ DF Sbjct: 266 WGCGYNNIQMLCSHLLAARPEARAALF---------------------GGAGFVPDIPALQAWLEAAWQAGYDPQGAEQLGSR--VQGTQKWIGSTEAAALLRFFGLRAQIADF 356
BLAST of mRNA_P-wetherbeei_contig12201.2.2 vs. uniprot
Match: A0A8J4LT10_9CHLO (ZZ-type domain-containing protein (Fragment) n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4LT10_9CHLO) HSP 1 Score: 97.1 bits (240), Expect = 3.500e-19 Identity = 54/113 (47.79%), Postives = 66/113 (58.41%), Query Frame = 2 Query: 797 WSCGYRNIQMLCSTLMALPPMAAVLFDGAVALATAGGAAAPATGASGGGLGKVPGVLGLQQWIEAAWAEGFDPEGCEQLGGRGALAGSTTWIGATECATLLRFFGIRAEVIDF 1135 W CG+RNIQM+ S L+A D A+ A GGA G VP + LQ W+E+AWA GFD GCE LGGR + G WIG TE A LLRFFG+RA+++DF Sbjct: 38 WGCGWRNIQMMSSGLLAR--------DKALRAAMYGGA------------GFVPDIASLQAWLESAWAAGFDRLGCESLGGR--IQGDRKWIGTTEAAALLRFFGVRAQIVDF 128
BLAST of mRNA_P-wetherbeei_contig12201.2.2 vs. uniprot
Match: A0A150G6P6_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150G6P6_GONPE) HSP 1 Score: 97.8 bits (242), Expect = 1.990e-18 Identity = 54/115 (46.96%), Postives = 65/115 (56.52%), Query Frame = 2 Query: 797 WSCGYRNIQMLCSTLMALPP-MAAVLFDGAVALATAGGAAAPATGASGGGLGKVPGVLGLQQWIEAAWAEGFDPEGCEQLGGRGALAGSTTWIGATECATLLRFFGIRAEVIDFE 1138 W CG+RNIQML S L+ P + A L+ GG G VP + LQ W+E+AWA GFD GCE LGGR + G WIG TE A LLR FG+RA+V+DFE Sbjct: 255 WGCGWRNIQMLSSALLLRSPQLRAALY---------------------GGAGFVPDIGSLQAWLESAWAAGFDTMGCESLGGR--IQGDRKWIGTTEAAALLRSFGVRAQVVDFE 346
BLAST of mRNA_P-wetherbeei_contig12201.2.2 vs. uniprot
Match: A0A6P5MDN7_ARADU (zinc finger with UFM1-specific peptidase domain protein isoform X1 n=8 Tax=Arachis TaxID=3817 RepID=A0A6P5MDN7_ARADU) HSP 1 Score: 96.3 bits (238), Expect = 3.170e-18 Identity = 54/114 (47.37%), Postives = 64/114 (56.14%), Query Frame = 2 Query: 797 WSCGYRNIQMLCSTLMALPPMAA-VLFDGAVALATAGGAAAPATGASGGGLGKVPGVLGLQQWIEAAWAEGFDPEGCEQLGGRGALAGSTTWIGATECATLLRFFGIRAEVIDF 1135 W CG+RN+QML S L+A P A VLF GGLG VP + LQ+W+E AW GFDP G +Q A+ GS WIG TECA LLR FG+RA V+DF Sbjct: 146 WGCGWRNLQMLSSHLLAQRPQAREVLF---------------------GGLGFVPDISSLQRWLEIAWGRGFDPPGADQF--NHAVYGSRKWIGTTECAALLRSFGLRARVVDF 236
BLAST of mRNA_P-wetherbeei_contig12201.2.2 vs. uniprot
Match: A0A8J4EW24_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4EW24_9CHLO) HSP 1 Score: 96.7 bits (239), Expect = 4.340e-18 Identity = 53/114 (46.49%), Postives = 67/114 (58.77%), Query Frame = 2 Query: 797 WSCGYRNIQMLCSTLMALPPMAAVLFDGAVALATAGGAAAPATGASGGGLGKVPGVLGLQQWIEAAWAEGFDPEGCEQLGGRGALAGSTTWIGATECATLLRFFGIRAEVIDFE 1138 W CG+RNIQM+ S L+ + D + A GGA G VP + LQ W+E+AWA GFD GCE LGGR + G WIGATE A LLRFFG++A+++DFE Sbjct: 123 WGCGWRNIQMISSALL--------VRDETMRTAMYGGA------------GFVPDIPSLQAWLESAWAAGFDRLGCESLGGR--IQGDRKWIGATEAAALLRFFGVKAQIVDFE 214
BLAST of mRNA_P-wetherbeei_contig12201.2.2 vs. uniprot
Match: A0A388KGA4_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KGA4_CHABU) HSP 1 Score: 97.1 bits (240), Expect = 4.890e-18 Identity = 55/126 (43.65%), Postives = 66/126 (52.38%), Query Frame = 2 Query: 764 HVSQRDAGGAQWSCGYRNIQMLCSTLMALPPMAA-VLFDGAVALATAGGAAAPATGASGGGLGKVPGVLGLQQWIEAAWAEGFDPEGCEQLGGRGALAGSTTWIGATECATLLRFFGIRAEVIDFE 1138 H + W CG+RNIQMLCS L+ A LF GG G VP + LQQW+E AW GFD G EQLG + + GS WIG TECA LLRFFG+RA ++DF+ Sbjct: 202 HYESKKRDDLGWGCGWRNIQMLCSNLIKTREDAKRTLF---------------------GGSGFVPSIKDLQQWLEVAWRSGFDVVGAEQLGWK--VYGSKKWIGTTECAALLRFFGLRARIVDFK 304
BLAST of mRNA_P-wetherbeei_contig12201.2.2 vs. uniprot
Match: A0A8J4EYH4_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4EYH4_9CHLO) HSP 1 Score: 96.7 bits (239), Expect = 5.460e-18 Identity = 53/114 (46.49%), Postives = 67/114 (58.77%), Query Frame = 2 Query: 797 WSCGYRNIQMLCSTLMALPPMAAVLFDGAVALATAGGAAAPATGASGGGLGKVPGVLGLQQWIEAAWAEGFDPEGCEQLGGRGALAGSTTWIGATECATLLRFFGIRAEVIDFE 1138 W CG+RNIQM+ S L+ + D + A GGA G VP + LQ W+E+AWA GFD GCE LGGR + G WIGATE A LLRFFG++A+++DFE Sbjct: 407 WGCGWRNIQMISSALL--------VRDETMRTAMYGGA------------GFVPDIPSLQAWLESAWAAGFDRLGCESLGGR--IQGDRKWIGATEAAALLRFFGVKAQIVDFE 498
BLAST of mRNA_P-wetherbeei_contig12201.2.2 vs. uniprot
Match: UPI000D1C6536 (zinc finger with UFM1-specific peptidase domain protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1C6536) HSP 1 Score: 95.9 bits (237), Expect = 5.880e-18 Identity = 54/115 (46.96%), Postives = 66/115 (57.39%), Query Frame = 2 Query: 797 WSCGYRNIQMLCSTLMALPPMAAVLFDGAVALATAGGAAAPATGASGGGLGKVPGVLGLQQWIEAAWAEGFDPEGCEQLGGRGALAGSTTWIGATECATLLRFFGIRAEVIDFEA 1141 W CG+RNIQML S L+A D A A GGA G VP + LQQW+E AW++GFD +G E GA+ GS WIG TECA LLR FG+RA ++DF+A Sbjct: 187 WGCGWRNIQMLSSYLLAR--------DEAYRKALFGGA------------GFVPTIAALQQWLEIAWSKGFDSDGAEHF--NGAIYGSQKWIGTTECAALLRLFGVRARIVDFKA 279 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12201.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12201.2.2 >prot_P-wetherbeei_contig12201.2.2 ID=prot_P-wetherbeei_contig12201.2.2|Name=mRNA_P-wetherbeei_contig12201.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=356bp MVKPKSKAICASWECGHCTFKNSGISLQCEVCLSPKASAGSMAGIAEEDDback to top mRNA from alignment at P-wetherbeei_contig12201:380..2030- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12201.2.2 ID=mRNA_P-wetherbeei_contig12201.2.2|Name=mRNA_P-wetherbeei_contig12201.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1651bp|location=Sequence derived from alignment at P-wetherbeei_contig12201:380..2030- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12201:380..2030- >mRNA_P-wetherbeei_contig12201.2.2 ID=mRNA_P-wetherbeei_contig12201.2.2|Name=mRNA_P-wetherbeei_contig12201.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1068bp|location=Sequence derived from alignment at P-wetherbeei_contig12201:380..2030- (Phaeothamnion wetherbeei SAG_119_79)back to top |