prot_P-wetherbeei_contig12186.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig12186.1.1
Unique Nameprot_P-wetherbeei_contig12186.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length237
Homology
BLAST of mRNA_P-wetherbeei_contig12186.1.1 vs. uniprot
Match: D8LIK5_ECTSI (RNA pol II accessory factor, Cdc73 family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIK5_ECTSI)

HSP 1 Score: 188 bits (477), Expect = 1.500e-53
Identity = 116/240 (48.33%), Postives = 151/240 (62.92%), Query Frame = 0
Query:    1 RLKVKRICDQEICVSDRNKVLRWPGRDFSFALHYYQEVRDAGRKTGKES---RAKRKGKALKFAVYRASGGTSTPSAXXXXXXXXXXXXXXXSHMVGPRSGPAARQWTGAPAIIIVPNTPSSMVTLYNAKQFLSDGRFEPSQLVKEQGDKKPANLRIERTLHNGQRMTYEVIDNPTRLYPQDWERVVCVLVQGVEWQFKRWQWEQPVTLFQTVLGVHLKYDDTRTLDTVAGWNVRVLEVS 237
            ++ V +I   E+ +SDRN VLR  G+ F FAL YY +VR   +   +E+     KRK +A + A    SG   T SA    XXXXXXXXXXX                GA  +IIVP  P+S+VTLYNA  FL DG F P+   K + ++KP+ + IER    G++M + VIDN TRL+P++W+  VCVLVQG  WQFK W+W+QPVTLFQ VLGVH+K+DD R  D V+ WNVRVLE++
Sbjct:  213 KMIVAKILANEMSISDRNSVLRKEGKSFRFALEYYNQVRRKEKDQARENVDGYGKRKTRADREARQSGSGRGGTISASGGRXXXXXXXXXXXD-------------LAGATPVIIVPTVPTSLVTLYNATDFLQDGNFIPTMDKKSKSERKPSEIMIERVNSQGKKMKFRVIDNATRLHPKEWKACVCVLVQGAAWQFKGWEWDQPVTLFQNVLGVHMKFDDVRVNDKVSQWNVRVLEIN 439          
BLAST of mRNA_P-wetherbeei_contig12186.1.1 vs. uniprot
Match: A0A4P9XSK4_9FUNG (RNA pol II accessory factor, Cdc73 family-domain-containing protein n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XSK4_9FUNG)

HSP 1 Score: 125 bits (313), Expect = 3.250e-30
Identity = 66/145 (45.52%), Postives = 88/145 (60.69%), Query Frame = 0
Query:   94 GPRSGPAARQWTGAPAIIIVPNTPSSMVTLYNAKQFLSDGRFEPSQLVKEQGDKKPANLRIERTLHNGQRMT-YEVIDNPTRLYPQDWERVVCVLVQGVEWQFKRWQWEQPVTLFQTVLGVHLKYDDTRTLDTVAGWNVRVLEVS 237
            G R+ PA  + T  P IIIVP   +S++ LYN KQFL D  F  S++ +EQ   +P +  IER    G+ +T Y+V+D+  RL P DW+RVV V V G EWQFK W W+ P+ +F  V G ++KY D +  D V  WNV  LE S
Sbjct:  216 GSRATPARTKGTRIP-IIIVPAAATSILNLYNVKQFLQDRVFLDSRIAREQSSTRPTSATIERHHAGGEAVTIYQVVDSVDRLRPDDWKRVVAVFVTGAEWQFKNWVWQNPLDIFSNVKGYYVKYSDEQPKDNVLRWNVTTLEAS 359          
BLAST of mRNA_P-wetherbeei_contig12186.1.1 vs. uniprot
Match: A0A7S3Y6H8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6H8_HETAK)

HSP 1 Score: 114 bits (285), Expect = 2.760e-28
Identity = 54/122 (44.26%), Postives = 78/122 (63.93%), Query Frame = 0
Query:  120 MVTLYNAKQFLSDGRFEPSQLVKEQGDKKPANLRIERTLHNGQ----RMTYEVIDNPTRLYPQDWERVVCVLVQGVEWQFKRWQWEQPVTLFQTVLGVHLKYDDTRTLDTVAGWNVRVLEVS 237
            M++L+NAK+F+ DG F PSQ  +  G  KPA + +ER    G       T+EV+DN  RL P+DW+RVV V+VQG  WQFK W++ QP+ LF   LG++ +Y+D +    V  WNV+ L ++
Sbjct:    1 MMSLFNAKEFMQDGSFVPSQEKRRAGAAKPARVVVERARPPGAPGEGNWTFEVVDNAARLKPRDWDRVVAVVVQGAAWQFKGWKYPQPLDLFNRYLGIYFQYEDEKIAAAVQQWNVKTLRIN 122          
BLAST of mRNA_P-wetherbeei_contig12186.1.1 vs. uniprot
Match: A0A7S3K0K2_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K0K2_9STRA)

HSP 1 Score: 120 bits (300), Expect = 8.500e-28
Identity = 57/130 (43.85%), Postives = 85/130 (65.38%), Query Frame = 0
Query:  108 PAIIIVPNTPSSMVTLYNAKQFLSDGRFEPSQLVKEQGDKKPANLRIERTLHNGQRMTYEVIDNPTRLYPQDWERVVCVLVQGVEWQFKRWQWEQPVTLFQTVLGVHLKYDDTRTLDTVAGWNVRVLEVS 237
            P IIIVP+  +S++TL NA  F+ DG+F P+   K  G K+  ++ IE+   +G    Y +IDNP +L P++++R+V V   G  WQFK W+  +PV LFQ VLG+HL++DD  T   +  WNVR+L++S
Sbjct:  283 PYIIIVPSATTSVLTLLNAADFMMDGKFIPTDEKKAAGIKRETSIIIEKQRSDGLMQPYRIIDNPIKLSPKEFDRIVAVFAMGPTWQFKGWRISEPVELFQRVLGIHLQFDDELTPTNITQWNVRILKLS 412          
BLAST of mRNA_P-wetherbeei_contig12186.1.1 vs. uniprot
Match: A0A7S0LM88_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LM88_9EUKA)

HSP 1 Score: 118 bits (296), Expect = 3.270e-27
Identity = 61/143 (42.66%), Postives = 92/143 (64.34%), Query Frame = 0
Query:   95 PRSGPAARQWTGAPAIIIVPNTPSSMVTLYNAKQFLSDGRFEPSQLVKEQGDKKPANLRIERTLHNGQRMTYEVIDNPTRLYPQDWERVVCVLVQGVEWQFKRWQWEQPVTLFQTVLGVHLKYDDTRTLDTVAGWNVRVLEVS 237
            P S  AA    G+  IIIVP+  +S+V+L+NA+Q L +  +     VK+ G+ KP+++R+  T  +G +  + +IDNP++L  +DWERVVCV VQG  WQFK W +E PV LF  +LGV++++ D +    V GW V+ L +S
Sbjct:  329 PASKQAASSRPGS--IIIVPSVVTSLVSLWNAQQLLQNKTWRAPIEVKQSGESKPSSVRLTHTFEDGAQGFFTIIDNPSKLTARDWERVVCVFVQGNAWQFKGWPFESPVDLFTKILGVNVRFSDEQPNQLVKGWTVKSLVLS 469          
BLAST of mRNA_P-wetherbeei_contig12186.1.1 vs. uniprot
Match: A0A1Y2GXI7_9FUNG (RNA pol II accessory factor, Cdc73 family-domain-containing protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GXI7_9FUNG)

HSP 1 Score: 117 bits (292), Expect = 4.380e-27
Identity = 57/130 (43.85%), Postives = 82/130 (63.08%), Query Frame = 0
Query:  110 IIIVPNTPSSMVTLYNAKQFLSDGRFEPSQLVKEQGDKKPANLRIERTLHNGQ--RMTYEVIDNPTRLYPQDWERVVCVLVQGVEWQFKRWQWEQPVTLFQTVLGVHLKYDDTRTLDTVAGWNVRVLEVS 237
            IIIVP   +SM+T+YN KQFL D  F  S+ ++ QG  KP+ L IER     +  +  Y VI+N  +L  +DW+RVVCV   G EWQFK+W+W+ PV LF  V G ++K+ D +  + +  WNV +L ++
Sbjct:  250 IIIVPAAMTSMLTMYNVKQFLEDQLFVNSEDIRNQGVTKPSRLSIERRQKPNEPHKTPYHVIENADQLKDEDWDRVVCVFTTGAEWQFKKWKWQTPVQLFAQVKGFYVKWADEQPKEIIKSWNVEILNLN 379          
BLAST of mRNA_P-wetherbeei_contig12186.1.1 vs. uniprot
Match: A0A8H7SHZ3_9FUNG (Tyrosine-protein phosphatase domain-containing protein n=1 Tax=Thamnidium elegans TaxID=101142 RepID=A0A8H7SHZ3_9FUNG)

HSP 1 Score: 117 bits (294), Expect = 1.330e-26
Identity = 55/128 (42.97%), Postives = 78/128 (60.94%), Query Frame = 0
Query:  110 IIIVPNTPSSMVTLYNAKQFLSDGRFEPSQLVKEQGDKKPANLRIERTLHNGQRMTYEVIDNPTRLYPQDWERVVCVLVQGVEWQFKRWQWEQPVTLFQTVLGVHLKYDDTRTLDTVAGWNVRVLEVS 237
            +IIVP  P++  TLYN KQFL D ++E SQ+++++G KKP  + +ER   NGQ + Y V+D+       DW+RV CV V G  WQFK W+WE+PV LF  V G + K+   +     + W V  + VS
Sbjct:  255 LIIVPAAPTAKFTLYNIKQFLEDQKYEDSQILRDEGRKKPERVTVERKKPNGQSVPYHVVDSVAHFKQSDWDRVCCVFVAGQLWQFKGWKWEKPVELFSNVKGFYPKWSSDKMTPPASEWAVSEINVS 382          
BLAST of mRNA_P-wetherbeei_contig12186.1.1 vs. uniprot
Match: A0A8H7PQN0_9FUNG (Uncharacterized protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7PQN0_9FUNG)

HSP 1 Score: 114 bits (286), Expect = 2.510e-26
Identity = 55/127 (43.31%), Postives = 77/127 (60.63%), Query Frame = 0
Query:  110 IIIVPNTPSSMVTLYNAKQFLSDGRFEPSQLVKEQGDKKPANLRIERTLHNGQRMTYEVIDNPTRLYPQDWERVVCVLVQGVEWQFKRWQWEQPVTLFQTVLGVHLKYDDTRTLDTVAGWNVRVLEV 236
            I+IVP  P++M+TL+N KQFL    F  SQ++++QG KKP  + IER   NGQ + Y V+D+       DW+RVVCV V G +WQFK W+WE+P+ LF  V GV+ K+           W V  + +
Sbjct:  235 IMIVPAAPTAMLTLFNIKQFLEGQEFVDSQVMRDQGMKKPERVTIERRKANGQVVPYHVVDSAVNFRQNDWDRVVCVFVAGQQWQFKGWKWEKPLELFSNVKGVYPKWQTDTLQGPAKDWAVTQMNI 361          
BLAST of mRNA_P-wetherbeei_contig12186.1.1 vs. uniprot
Match: A0A4V1J114_9FUNG (RNA pol II accessory factor, Cdc73 family-domain-containing protein (Fragment) n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4V1J114_9FUNG)

HSP 1 Score: 114 bits (285), Expect = 2.710e-26
Identity = 58/128 (45.31%), Postives = 76/128 (59.38%), Query Frame = 0
Query:  110 IIIVPNTPSSMVTLYNAKQFLSDGRFEPSQLVKEQGDKKPANLRIERTLHNGQRMT-YEVIDNPTRLYPQDWERVVCVLVQGVEWQFKRWQWEQPVTLFQTVLGVHLKYDDTRTLDTVAGWNVRVLEV 236
            IIIVP   +S++ LYN KQFL +  F  S+  +E    +P+ + IER        T Y+VID+  +L P DW+RVV V   G EWQFK W W+ P+ +F  V G +LKY D    DTV  WNV +LEV
Sbjct:  217 IIIVPAAATSLINLYNVKQFLEEKSFVDSRASREHSTARPSLVNIERRNEGTDTTTVYQVIDSVDKLRPDDWKRVVAVFTTGAEWQFKNWVWQTPLEIFNNVKGYYLKYTDEPAKDTVQRWNVTILEV 344          
BLAST of mRNA_P-wetherbeei_contig12186.1.1 vs. uniprot
Match: A7SKC9_NEMVE (Predicted protein n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7SKC9_NEMVE)

HSP 1 Score: 115 bits (289), Expect = 3.300e-26
Identity = 57/132 (43.18%), Postives = 80/132 (60.61%), Query Frame = 0
Query:  110 IIIVPNTPSSMVTLYNAKQFLSDGRFEPSQLVKEQGDKKPANLRIERTLHNGQRMTYEVIDNPTRLYPQDWERVVCVLVQGVEWQFKRWQW----EQPVTLFQTVLGVHLKYDDTRTLDTVAGWNVRVLEVS 237
            II++P   +S++T+YNAK+ L D +F  S   K+QG ++   + I+R       + Y V+DNPTRL P +W+RVV V VQG  WQFK W W      PV +F    G HLKYDDT+T   V  W+V +L ++
Sbjct:  357 IIVIPAGSTSLITIYNAKELLQDFKFVSSDEKKKQGARRENEVLIQRRKDASTTVPYRVVDNPTRLQPNEWDRVVAVFVQGPTWQFKGWPWLLADGSPVDIFTKTRGFHLKYDDTKTDPNVQKWDVTILTIN 488          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12186.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIK5_ECTSI1.500e-5348.33RNA pol II accessory factor, Cdc73 family protein ... [more]
A0A4P9XSK4_9FUNG3.250e-3045.52RNA pol II accessory factor, Cdc73 family-domain-c... [more]
A0A7S3Y6H8_HETAK2.760e-2844.26Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3K0K2_9STRA8.500e-2843.85Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S0LM88_9EUKA3.270e-2742.66Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A1Y2GXI7_9FUNG4.380e-2743.85RNA pol II accessory factor, Cdc73 family-domain-c... [more]
A0A8H7SHZ3_9FUNG1.330e-2642.97Tyrosine-protein phosphatase domain-containing pro... [more]
A0A8H7PQN0_9FUNG2.510e-2643.31Uncharacterized protein n=1 Tax=Umbelopsis vinacea... [more]
A0A4V1J114_9FUNG2.710e-2645.31RNA pol II accessory factor, Cdc73 family-domain-c... [more]
A7SKC9_NEMVE3.300e-2643.18Predicted protein n=2 Tax=Nematostella vectensis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031336Cell division control protein 73, C-terminalPFAMPF05179CDC73_Ccoord: 110..237
e-value: 2.1E-39
score: 134.7
IPR038103Cell division control protein 73, C-terminal domain superfamilyGENE3D3.40.50.11990coord: 100..237
e-value: 1.0E-41
score: 144.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..86
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..100
IPR007852Cdc73/ParafibrominPANTHERPTHR12466CDC73 DOMAIN PROTEINcoord: 5..237

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12186contigP-wetherbeei_contig12186:115..1793 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12186.1.1mRNA_P-wetherbeei_contig12186.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig12186 115..1793 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig12186.1.1 ID=prot_P-wetherbeei_contig12186.1.1|Name=mRNA_P-wetherbeei_contig12186.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=237bp
RLKVKRICDQEICVSDRNKVLRWPGRDFSFALHYYQEVRDAGRKTGKESR
AKRKGKALKFAVYRASGGTSTPSASGGRSSSSGGGGGGGSHMVGPRSGPA
ARQWTGAPAIIIVPNTPSSMVTLYNAKQFLSDGRFEPSQLVKEQGDKKPA
NLRIERTLHNGQRMTYEVIDNPTRLYPQDWERVVCVLVQGVEWQFKRWQW
EQPVTLFQTVLGVHLKYDDTRTLDTVAGWNVRVLEVS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031336CDC73_C
IPR038103CDC73_C_sf
IPR007852Cdc73/Parafibromin