mRNA_P-wetherbeei_contig12186.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12186.1.1 vs. uniprot
Match: D8LIK5_ECTSI (RNA pol II accessory factor, Cdc73 family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIK5_ECTSI) HSP 1 Score: 188 bits (477), Expect = 1.500e-53 Identity = 116/240 (48.33%), Postives = 151/240 (62.92%), Query Frame = 1 Query: 1 RLKVKRICDQEICVSDRNKVLRWPGRDFSFALHYYQEVRDAGRKTGKES---RAKRKGKALKFAVYRASGGTSTPSAXXXXXXXXXXXXXXXSHMVGPRSGPAARQWTGAPAIIIVPNTPSSMVTLYNAKQFLSDGRFEPSQLVKEQGDKKPANLRIERTLHNGQRMTYEVIDNPTRLYPQDWERVVCVLVQGVEWQFKRWQWEQPVTLFQTVLGVHLKYDDTRTLDTVAGWNVRVLEVS 711 ++ V +I E+ +SDRN VLR G+ F FAL YY +VR + +E+ KRK +A + A SG T SA XXXXXXXXXXX GA +IIVP P+S+VTLYNA FL DG F P+ K + ++KP+ + IER G++M + VIDN TRL+P++W+ VCVLVQG WQFK W+W+QPVTLFQ VLGVH+K+DD R D V+ WNVRVLE++ Sbjct: 213 KMIVAKILANEMSISDRNSVLRKEGKSFRFALEYYNQVRRKEKDQARENVDGYGKRKTRADREARQSGSGRGGTISASGGRXXXXXXXXXXXD-------------LAGATPVIIVPTVPTSLVTLYNATDFLQDGNFIPTMDKKSKSERKPSEIMIERVNSQGKKMKFRVIDNATRLHPKEWKACVCVLVQGAAWQFKGWEWDQPVTLFQNVLGVHMKFDDVRVNDKVSQWNVRVLEIN 439
BLAST of mRNA_P-wetherbeei_contig12186.1.1 vs. uniprot
Match: A0A4P9XSK4_9FUNG (RNA pol II accessory factor, Cdc73 family-domain-containing protein n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XSK4_9FUNG) HSP 1 Score: 125 bits (313), Expect = 3.250e-30 Identity = 66/145 (45.52%), Postives = 88/145 (60.69%), Query Frame = 1 Query: 280 GPRSGPAARQWTGAPAIIIVPNTPSSMVTLYNAKQFLSDGRFEPSQLVKEQGDKKPANLRIERTLHNGQRMT-YEVIDNPTRLYPQDWERVVCVLVQGVEWQFKRWQWEQPVTLFQTVLGVHLKYDDTRTLDTVAGWNVRVLEVS 711 G R+ PA + T P IIIVP +S++ LYN KQFL D F S++ +EQ +P + IER G+ +T Y+V+D+ RL P DW+RVV V V G EWQFK W W+ P+ +F V G ++KY D + D V WNV LE S Sbjct: 216 GSRATPARTKGTRIP-IIIVPAAATSILNLYNVKQFLQDRVFLDSRIAREQSSTRPTSATIERHHAGGEAVTIYQVVDSVDRLRPDDWKRVVAVFVTGAEWQFKNWVWQNPLDIFSNVKGYYVKYSDEQPKDNVLRWNVTTLEAS 359
BLAST of mRNA_P-wetherbeei_contig12186.1.1 vs. uniprot
Match: A0A7S3Y6H8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6H8_HETAK) HSP 1 Score: 114 bits (285), Expect = 2.760e-28 Identity = 54/122 (44.26%), Postives = 78/122 (63.93%), Query Frame = 1 Query: 358 MVTLYNAKQFLSDGRFEPSQLVKEQGDKKPANLRIERTLHNGQ----RMTYEVIDNPTRLYPQDWERVVCVLVQGVEWQFKRWQWEQPVTLFQTVLGVHLKYDDTRTLDTVAGWNVRVLEVS 711 M++L+NAK+F+ DG F PSQ + G KPA + +ER G T+EV+DN RL P+DW+RVV V+VQG WQFK W++ QP+ LF LG++ +Y+D + V WNV+ L ++ Sbjct: 1 MMSLFNAKEFMQDGSFVPSQEKRRAGAAKPARVVVERARPPGAPGEGNWTFEVVDNAARLKPRDWDRVVAVVVQGAAWQFKGWKYPQPLDLFNRYLGIYFQYEDEKIAAAVQQWNVKTLRIN 122
BLAST of mRNA_P-wetherbeei_contig12186.1.1 vs. uniprot
Match: A0A7S3K0K2_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K0K2_9STRA) HSP 1 Score: 120 bits (300), Expect = 8.500e-28 Identity = 57/130 (43.85%), Postives = 85/130 (65.38%), Query Frame = 1 Query: 322 PAIIIVPNTPSSMVTLYNAKQFLSDGRFEPSQLVKEQGDKKPANLRIERTLHNGQRMTYEVIDNPTRLYPQDWERVVCVLVQGVEWQFKRWQWEQPVTLFQTVLGVHLKYDDTRTLDTVAGWNVRVLEVS 711 P IIIVP+ +S++TL NA F+ DG+F P+ K G K+ ++ IE+ +G Y +IDNP +L P++++R+V V G WQFK W+ +PV LFQ VLG+HL++DD T + WNVR+L++S Sbjct: 283 PYIIIVPSATTSVLTLLNAADFMMDGKFIPTDEKKAAGIKRETSIIIEKQRSDGLMQPYRIIDNPIKLSPKEFDRIVAVFAMGPTWQFKGWRISEPVELFQRVLGIHLQFDDELTPTNITQWNVRILKLS 412
BLAST of mRNA_P-wetherbeei_contig12186.1.1 vs. uniprot
Match: A0A7S0LM88_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LM88_9EUKA) HSP 1 Score: 118 bits (296), Expect = 3.270e-27 Identity = 61/143 (42.66%), Postives = 92/143 (64.34%), Query Frame = 1 Query: 283 PRSGPAARQWTGAPAIIIVPNTPSSMVTLYNAKQFLSDGRFEPSQLVKEQGDKKPANLRIERTLHNGQRMTYEVIDNPTRLYPQDWERVVCVLVQGVEWQFKRWQWEQPVTLFQTVLGVHLKYDDTRTLDTVAGWNVRVLEVS 711 P S AA G+ IIIVP+ +S+V+L+NA+Q L + + VK+ G+ KP+++R+ T +G + + +IDNP++L +DWERVVCV VQG WQFK W +E PV LF +LGV++++ D + V GW V+ L +S Sbjct: 329 PASKQAASSRPGS--IIIVPSVVTSLVSLWNAQQLLQNKTWRAPIEVKQSGESKPSSVRLTHTFEDGAQGFFTIIDNPSKLTARDWERVVCVFVQGNAWQFKGWPFESPVDLFTKILGVNVRFSDEQPNQLVKGWTVKSLVLS 469
BLAST of mRNA_P-wetherbeei_contig12186.1.1 vs. uniprot
Match: A0A1Y2GXI7_9FUNG (RNA pol II accessory factor, Cdc73 family-domain-containing protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GXI7_9FUNG) HSP 1 Score: 117 bits (292), Expect = 4.380e-27 Identity = 57/130 (43.85%), Postives = 82/130 (63.08%), Query Frame = 1 Query: 328 IIIVPNTPSSMVTLYNAKQFLSDGRFEPSQLVKEQGDKKPANLRIERTLHNGQ--RMTYEVIDNPTRLYPQDWERVVCVLVQGVEWQFKRWQWEQPVTLFQTVLGVHLKYDDTRTLDTVAGWNVRVLEVS 711 IIIVP +SM+T+YN KQFL D F S+ ++ QG KP+ L IER + + Y VI+N +L +DW+RVVCV G EWQFK+W+W+ PV LF V G ++K+ D + + + WNV +L ++ Sbjct: 250 IIIVPAAMTSMLTMYNVKQFLEDQLFVNSEDIRNQGVTKPSRLSIERRQKPNEPHKTPYHVIENADQLKDEDWDRVVCVFTTGAEWQFKKWKWQTPVQLFAQVKGFYVKWADEQPKEIIKSWNVEILNLN 379
BLAST of mRNA_P-wetherbeei_contig12186.1.1 vs. uniprot
Match: A0A8H7SHZ3_9FUNG (Tyrosine-protein phosphatase domain-containing protein n=1 Tax=Thamnidium elegans TaxID=101142 RepID=A0A8H7SHZ3_9FUNG) HSP 1 Score: 117 bits (294), Expect = 1.330e-26 Identity = 55/128 (42.97%), Postives = 78/128 (60.94%), Query Frame = 1 Query: 328 IIIVPNTPSSMVTLYNAKQFLSDGRFEPSQLVKEQGDKKPANLRIERTLHNGQRMTYEVIDNPTRLYPQDWERVVCVLVQGVEWQFKRWQWEQPVTLFQTVLGVHLKYDDTRTLDTVAGWNVRVLEVS 711 +IIVP P++ TLYN KQFL D ++E SQ+++++G KKP + +ER NGQ + Y V+D+ DW+RV CV V G WQFK W+WE+PV LF V G + K+ + + W V + VS Sbjct: 255 LIIVPAAPTAKFTLYNIKQFLEDQKYEDSQILRDEGRKKPERVTVERKKPNGQSVPYHVVDSVAHFKQSDWDRVCCVFVAGQLWQFKGWKWEKPVELFSNVKGFYPKWSSDKMTPPASEWAVSEINVS 382
BLAST of mRNA_P-wetherbeei_contig12186.1.1 vs. uniprot
Match: A0A8H7PQN0_9FUNG (Uncharacterized protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7PQN0_9FUNG) HSP 1 Score: 114 bits (286), Expect = 2.510e-26 Identity = 55/127 (43.31%), Postives = 77/127 (60.63%), Query Frame = 1 Query: 328 IIIVPNTPSSMVTLYNAKQFLSDGRFEPSQLVKEQGDKKPANLRIERTLHNGQRMTYEVIDNPTRLYPQDWERVVCVLVQGVEWQFKRWQWEQPVTLFQTVLGVHLKYDDTRTLDTVAGWNVRVLEV 708 I+IVP P++M+TL+N KQFL F SQ++++QG KKP + IER NGQ + Y V+D+ DW+RVVCV V G +WQFK W+WE+P+ LF V GV+ K+ W V + + Sbjct: 235 IMIVPAAPTAMLTLFNIKQFLEGQEFVDSQVMRDQGMKKPERVTIERRKANGQVVPYHVVDSAVNFRQNDWDRVVCVFVAGQQWQFKGWKWEKPLELFSNVKGVYPKWQTDTLQGPAKDWAVTQMNI 361
BLAST of mRNA_P-wetherbeei_contig12186.1.1 vs. uniprot
Match: A0A4V1J114_9FUNG (RNA pol II accessory factor, Cdc73 family-domain-containing protein (Fragment) n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4V1J114_9FUNG) HSP 1 Score: 114 bits (285), Expect = 2.710e-26 Identity = 58/128 (45.31%), Postives = 76/128 (59.38%), Query Frame = 1 Query: 328 IIIVPNTPSSMVTLYNAKQFLSDGRFEPSQLVKEQGDKKPANLRIERTLHNGQRMT-YEVIDNPTRLYPQDWERVVCVLVQGVEWQFKRWQWEQPVTLFQTVLGVHLKYDDTRTLDTVAGWNVRVLEV 708 IIIVP +S++ LYN KQFL + F S+ +E +P+ + IER T Y+VID+ +L P DW+RVV V G EWQFK W W+ P+ +F V G +LKY D DTV WNV +LEV Sbjct: 217 IIIVPAAATSLINLYNVKQFLEEKSFVDSRASREHSTARPSLVNIERRNEGTDTTTVYQVIDSVDKLRPDDWKRVVAVFTTGAEWQFKNWVWQTPLEIFNNVKGYYLKYTDEPAKDTVQRWNVTILEV 344
BLAST of mRNA_P-wetherbeei_contig12186.1.1 vs. uniprot
Match: A7SKC9_NEMVE (Predicted protein n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7SKC9_NEMVE) HSP 1 Score: 115 bits (289), Expect = 3.300e-26 Identity = 57/132 (43.18%), Postives = 80/132 (60.61%), Query Frame = 1 Query: 328 IIIVPNTPSSMVTLYNAKQFLSDGRFEPSQLVKEQGDKKPANLRIERTLHNGQRMTYEVIDNPTRLYPQDWERVVCVLVQGVEWQFKRWQW----EQPVTLFQTVLGVHLKYDDTRTLDTVAGWNVRVLEVS 711 II++P +S++T+YNAK+ L D +F S K+QG ++ + I+R + Y V+DNPTRL P +W+RVV V VQG WQFK W W PV +F G HLKYDDT+T V W+V +L ++ Sbjct: 357 IIVIPAGSTSLITIYNAKELLQDFKFVSSDEKKKQGARRENEVLIQRRKDASTTVPYRVVDNPTRLQPNEWDRVVAVFVQGPTWQFKGWPWLLADGSPVDIFTKTRGFHLKYDDTKTDPNVQKWDVTILTIN 488 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12186.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12186.1.1 >prot_P-wetherbeei_contig12186.1.1 ID=prot_P-wetherbeei_contig12186.1.1|Name=mRNA_P-wetherbeei_contig12186.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=237bp RLKVKRICDQEICVSDRNKVLRWPGRDFSFALHYYQEVRDAGRKTGKESRback to top mRNA from alignment at P-wetherbeei_contig12186:115..1793- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12186.1.1 ID=mRNA_P-wetherbeei_contig12186.1.1|Name=mRNA_P-wetherbeei_contig12186.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1679bp|location=Sequence derived from alignment at P-wetherbeei_contig12186:115..1793- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12186:115..1793- >mRNA_P-wetherbeei_contig12186.1.1 ID=mRNA_P-wetherbeei_contig12186.1.1|Name=mRNA_P-wetherbeei_contig12186.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=711bp|location=Sequence derived from alignment at P-wetherbeei_contig12186:115..1793- (Phaeothamnion wetherbeei SAG_119_79)back to top |