prot_P-wetherbeei_contig12180.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig12180.1.1
Unique Nameprot_P-wetherbeei_contig12180.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length118
Homology
BLAST of mRNA_P-wetherbeei_contig12180.1.1 vs. uniprot
Match: D7G4M2_ECTSI (Smc-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4M2_ECTSI)

HSP 1 Score: 153 bits (386), Expect = 9.940e-41
Identity = 75/118 (63.56%), Postives = 95/118 (80.51%), Query Frame = 0
Query:    1 GDALVQVTLLNSDDGFEYDKYGDSITVRRTIKRAGGGGKLELIGEGGEVLSRDRKDLEKMLDHLNIQVDNPCAVLDQENAKKFLQGSERDKYHFFMKATDLDRIIRDSQETRRQIDAM 118
            GDA+++VTLLN++ GF +++YG+SIT+RRTIK+  GGG   L+G  G V S+++ +L ++LD LNIQVDNPCAVLDQEN+KKFLQGSE DKY FFMKATDL+RI  DS ET R I  M
Sbjct:  246 GDAVLEVTLLNTEHGFMFEEYGESITIRRTIKQPSGGG-FALVGADGAVKSKEKSELTRLLDTLNIQVDNPCAVLDQENSKKFLQGSESDKYAFFMKATDLERIHADSLETGRSISTM 362          
BLAST of mRNA_P-wetherbeei_contig12180.1.1 vs. uniprot
Match: D7G4M1_ECTSI (Smc-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4M1_ECTSI)

HSP 1 Score: 130 bits (327), Expect = 8.890e-33
Identity = 62/104 (59.62%), Postives = 85/104 (81.73%), Query Frame = 0
Query:    1 GDALVQVTLLNSDDGFEYDKYGDSITVRRTIKRAGGGGKLELIGEGGEVLSRDRKDLEKMLDHLNIQVDNPCAVLDQENAKKFLQGSERDKYHFFMKATDLDRI 104
            GDA+++VTLLN++ GF +++YG+SIT+RRTIK+  GGG   L+G   +V S ++ +L +ML+ LNIQVDNP AVLDQEN+KKF+ G+E+DKY FF+KATDL RI
Sbjct:  153 GDAVLEVTLLNTEHGFMFEEYGESITIRRTIKQPSGGG-FALLGHDRKVKSTNKAELLRMLEFLNIQVDNPVAVLDQENSKKFILGTEKDKYEFFLKATDLGRI 255          
BLAST of mRNA_P-wetherbeei_contig12180.1.1 vs. uniprot
Match: A0A836CML4_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CML4_9STRA)

HSP 1 Score: 127 bits (318), Expect = 1.460e-31
Identity = 62/106 (58.49%), Postives = 79/106 (74.53%), Query Frame = 0
Query:    1 GDALVQVTLLNSDDGFEYDKYGDSITVRRTIKRAGGGGKLELIGEGGEVLSRDRKDLEKMLDHLNIQVDNPCAVLDQENAKKFLQGSERDKYHFFMKATDLDRIIR 106
            GDA V+V +LN+ DG ++D YG SITVRR IKR G    +EL+   G V+ RDRK+LE++LD  NI V+NPC VLDQEN+KKFL+GS+ DKY FF+KAT  D + R
Sbjct:  144 GDAEVEVKMLNTPDGHKFDVYGQSITVRRVIKR-GASAVVELLSHDGTVVCRDRKELERILDSFNISVENPCVVLDQENSKKFLKGSDEDKYMFFLKATFTDTVPR 248          
BLAST of mRNA_P-wetherbeei_contig12180.1.1 vs. uniprot
Match: A0A1E7FGS7_9STRA (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FGS7_9STRA)

HSP 1 Score: 125 bits (314), Expect = 5.010e-31
Identity = 67/117 (57.26%), Postives = 80/117 (68.38%), Query Frame = 0
Query:    3 ALVQVTLLNS-DDGFEYDKYGDSITVRRTIKRAGGGGKLELIGEGGEVLSRDRKDLEKMLDHLNIQVDNPCAVLDQENAKKFLQGSERDKYHFFMKATDLDRIIRDSQETRRQIDAM 118
            A ++VTLLN  DD F++D YGDSITV RTI   GG    +L G      SR +KDL++MLD LNIQV+NP A+LDQE AKKFL G + DKY FFMKAT+L+RI      T  QID M
Sbjct:   62 AKIRVTLLNKGDDSFKHDVYGDSITVERTIALRGGYNGYKLYGADDVEQSRSKKDLDEMLDKLNIQVENPVAILDQEEAKKFLTGKDTDKYRFFMKATELERIDNTYGSTMEQIDEM 178          
BLAST of mRNA_P-wetherbeei_contig12180.1.1 vs. uniprot
Match: A0A1Z5K864_FISSO (AAA_23 domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K864_FISSO)

HSP 1 Score: 124 bits (311), Expect = 1.210e-30
Identity = 65/118 (55.08%), Postives = 82/118 (69.49%), Query Frame = 0
Query:    2 DALVQVTLLNS-DDGFEYDKYGDSITVRRTIKRAGGGGKLELIGEGGEVLSRDRKDLEKMLDHLNIQVDNPCAVLDQENAKKFLQGSERDKYHFFMKATDLDRIIRDSQETRRQIDAM 118
            +A+V+V+L N   D +E DKYG +ITV RTI R+GG    +L+ E G  +SR +KDL +MLDHLNIQVDNP AVLDQE AKKFL GS+ +KY FF KA DL RI      T  +I+ +
Sbjct:  287 EAIVRVSLTNEGSDAYEADKYGKTITVERTITRSGGFNGYKLLDEAGREVSRKKKDLCRMLDHLNIQVDNPVAVLDQEKAKKFLLGSDTEKYEFFQKANDLSRINAKYSATLEEIEEL 404          
BLAST of mRNA_P-wetherbeei_contig12180.1.1 vs. uniprot
Match: A0A6V2GEJ9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2GEJ9_9STRA)

HSP 1 Score: 118 bits (296), Expect = 1.040e-29
Identity = 64/124 (51.61%), Postives = 85/124 (68.55%), Query Frame = 0
Query:    3 ALVQVTLLN-SDDGFEYDKYGDSITVRRTIKRAGGGGKLELIGEGGEVLSRDRKDLEKMLDHLNIQVDNPCAVLDQENAKKFLQGSERDKYHFFMKATDLDRI----------IRDSQETRRQI 115
            A V+VTLLN  DDGF+ D YGD+ITV R+I   GG    +L+ +  +  SR ++DL+ MLD LNIQV+NP AVLDQE AKKFL G E DKY FF+KAT+L+R+          I+D +ET+ ++
Sbjct:  177 AKVRVTLLNRGDDGFQRDVYGDTITVERSISLRGGYNGYKLLDDQLKEKSRSKRDLDAMLDQLNIQVENPVAVLDQEEAKKFLMGKEEDKYAFFIKATELERLDQTYASAVDNIQDLEETKNRV 300          
BLAST of mRNA_P-wetherbeei_contig12180.1.1 vs. uniprot
Match: A0A7S1W016_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1W016_9STRA)

HSP 1 Score: 119 bits (299), Expect = 5.270e-29
Identity = 65/124 (52.42%), Postives = 85/124 (68.55%), Query Frame = 0
Query:    3 ALVQVTLLN-SDDGFEYDKYGDSITVRRTIKRAGGGGKLELIGEGGEVLSRDRKDLEKMLDHLNIQVDNPCAVLDQENAKKFLQGSERDKYHFFMKATDLDRI----------IRDSQETRRQI 115
            A V+VTLLN  DDGF+ D YGD+ITV R+I   GG    +L+ +  +  SR +KDL+ MLD LNIQV+NP AVLDQE AKKFL G E DKY FF+KAT+L+R+          I+D +ET+ ++
Sbjct:   21 AKVRVTLLNRGDDGFQRDVYGDTITVERSISLRGGYNGYKLLDDQLKEKSRSKKDLDAMLDQLNIQVENPVAVLDQEEAKKFLMGKEEDKYAFFIKATELERLDQTYASAVDNIQDLEETKNRV 144          
BLAST of mRNA_P-wetherbeei_contig12180.1.1 vs. uniprot
Match: A0A7S4RG96_9STRA (Hypothetical protein (Fragment) n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RG96_9STRA)

HSP 1 Score: 118 bits (296), Expect = 1.250e-28
Identity = 64/124 (51.61%), Postives = 85/124 (68.55%), Query Frame = 0
Query:    3 ALVQVTLLN-SDDGFEYDKYGDSITVRRTIKRAGGGGKLELIGEGGEVLSRDRKDLEKMLDHLNIQVDNPCAVLDQENAKKFLQGSERDKYHFFMKATDLDRI----------IRDSQETRRQI 115
            A V+VTLLN  DDGF+ D YGD+ITV R+I   GG    +L+ +  +  SR ++DL+ MLD LNIQV+NP AVLDQE AKKFL G E DKY FF+KAT+L+R+          I+D +ET+ ++
Sbjct:  177 AKVRVTLLNRGDDGFQRDVYGDTITVERSISLRGGYNGYKLLDDQLKEKSRSKRDLDAMLDQLNIQVENPVAVLDQEEAKKFLMGKEEDKYAFFIKATELERLDQTYASAVDNIQDLEETKNRV 300          
BLAST of mRNA_P-wetherbeei_contig12180.1.1 vs. uniprot
Match: A0A7S1FSU6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FSU6_9STRA)

HSP 1 Score: 118 bits (296), Expect = 1.310e-28
Identity = 63/107 (58.88%), Postives = 76/107 (71.03%), Query Frame = 0
Query:    1 GDALVQVTLLN-SDDGFEYDKYGDSITVRRTIKRAGGGGKLELIGEGGEVLSRDRKDLEKMLDHLNIQVDNPCAVLDQENAKKFLQGSERDKYHFFMKATDLDRIIR 106
            G ++V+V LLN  DD +E+D YGD +TV RTI+R G GG   L+ E   V S  R DL+ +LDHLNIQVDNP AVLDQE AK+FL G   DKY FF KAT+L+RI R
Sbjct:  169 GKSVVKVRLLNRGDDAYEHDLYGDYVTVERTIERNGSGG-YRLLDEHEAVKSMRRGDLDSLLDHLNIQVDNPVAVLDQEEAKRFLTGKPEDKYAFFTKATELERIDR 274          
BLAST of mRNA_P-wetherbeei_contig12180.1.1 vs. uniprot
Match: A0A7S2UR98_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UR98_9STRA)

HSP 1 Score: 117 bits (294), Expect = 2.500e-28
Identity = 61/103 (59.22%), Postives = 74/103 (71.84%), Query Frame = 0
Query:    3 ALVQVTLLNS-DDGFEYDKYGDSITVRRTIKRAGGGGKLELIGEGGEVLSRDRKDLEKMLDHLNIQVDNPCAVLDQENAKKFLQGSERDKYHFFMKATDLDRI 104
            A V+VTLLN  +DG++ + YGDSIT+ R+I   GG     L+   G+  SR +KDLE MLD LNIQVDNP AVLDQE AKKFL G  +DKY FF KAT+L+RI
Sbjct:  134 AKVRVTLLNGGEDGYKREMYGDSITIERSITLRGGYNGYRLLDHDGKERSRSKKDLEAMLDQLNIQVDNPVAVLDQEEAKKFLTGRPQDKYDFFAKATELERI 236          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12180.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4M2_ECTSI9.940e-4163.56Smc-like protein n=2 Tax=Ectocarpus TaxID=2879 Rep... [more]
D7G4M1_ECTSI8.890e-3359.62Smc-like protein n=1 Tax=Ectocarpus siliculosus Ta... [more]
A0A836CML4_9STRA1.460e-3158.49P-loop containing nucleoside triphosphate hydrolas... [more]
A0A1E7FGS7_9STRA5.010e-3157.26p-loop containing nucleoside triphosphate hydrolas... [more]
A0A1Z5K864_FISSO1.210e-3055.08AAA_23 domain-containing protein n=1 Tax=Fistulife... [more]
A0A6V2GEJ9_9STRA1.040e-2951.61Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S1W016_9STRA5.270e-2952.42Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4RG96_9STRA1.250e-2851.61Hypothetical protein (Fragment) n=3 Tax=Ditylum br... [more]
A0A7S1FSU6_9STRA1.310e-2858.88Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A7S2UR98_9STRA2.500e-2859.22Hypothetical protein n=1 Tax=Attheya septentrional... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..118
e-value: 1.9E-11
score: 46.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 16..116
NoneNo IPR availablePANTHERPTHR19306STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6coord: 3..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12180contigP-wetherbeei_contig12180:100..1253 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12180.1.1mRNA_P-wetherbeei_contig12180.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig12180 100..1253 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig12180.1.1 ID=prot_P-wetherbeei_contig12180.1.1|Name=mRNA_P-wetherbeei_contig12180.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=118bp
GDALVQVTLLNSDDGFEYDKYGDSITVRRTIKRAGGGGKLELIGEGGEVL
SRDRKDLEKMLDHLNIQVDNPCAVLDQENAKKFLQGSERDKYHFFMKATD
LDRIIRDSQETRRQIDAM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase