mRNA_P-wetherbeei_contig12167.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12167.1.1
Unique NamemRNA_P-wetherbeei_contig12167.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig12167.1.1 vs. uniprot
Match: A0A7S2STJ4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STJ4_9STRA)

HSP 1 Score: 639 bits (1648), Expect = 4.530e-221
Identity = 292/364 (80.22%), Postives = 335/364 (92.03%), Query Frame = 1
Query:   10 QVGIEFMDLYSHLIPVYEVEPLEKITDAYLDQYLWFEADKRHLFPNWVKPSDAEPPPLLVYKWCQGINNVSDVWQTDGGECVVMLQAKLEKVYEKVDLTLLNRLMRLIVDHNIADYMTGKNNVVLAYKDMMHTNNYGLIRGLQFSSFVFQYYGLVLDLLLLGLTRASDIAGSPAMPNPFLTYRDAAVEARHPIRLYMRYVDQIFMVFRFDAEDARELIQRYLTEHPDPNNENVVGYNNKKCWPRDCRMRLMKHDVNLGRATFWDIKNRLPRSVTTVEWENSFVSVYSKDNPNLLFDMVGFEVRIKPKCRMIGEAPVHADGVWKLQNDLTKEMTAQGFLRVDESSLRSFEHRVRQILMSSGRTTF 1101
            +V IEFMDLYSHLIPV+ +EPLEKITDAYLDQYLW+EADKRHLFPNW KPSD+EPPPLLVYKWCQG+NN+ DVW T+ GECVVM++++L KVYEK+DLTLLNRL+RLIVDHNIADYMT KNNV +++KDMMH N+YGL+RGLQF+SFVFQYYGLV+DLL+LGLTRAS+IAG P +PN +L +RD A E +HPIR+Y RYVD++F+VFRFDAE+AR+LIQRYLTEHPDPNNEN+VGYNNKKCWPRDCRMRLMKHDVNLGRATFWDIKNRLPRSVTT+EWE+SFVSVYSKDNPNLLF+M GFEVR+KPK RM  E PVH DGVW LQN+ TKEMTAQ FLRVDE +LR+FE+R+RQILMSSG TTF
Sbjct:  278 EVSIEFMDLYSHLIPVFAIEPLEKITDAYLDQYLWYEADKRHLFPNWCKPSDSEPPPLLVYKWCQGVNNLEDVWGTESGECVVMMESELSKVYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVTISFKDMMHINSYGLVRGLQFASFVFQYYGLVIDLLVLGLTRASEIAGPPQVPNDYLCFRDVATETKHPIRMYTRYVDKVFIVFRFDAEEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDCRMRLMKHDVNLGRATFWDIKNRLPRSVTTIEWEDSFVSVYSKDNPNLLFNMCGFEVRMKPKIRMHMELPVHKDGVWNLQNESTKEMTAQAFLRVDEDALRTFENRIRQILMSSGSTTF 641          
BLAST of mRNA_P-wetherbeei_contig12167.1.1 vs. uniprot
Match: A0A836C932_9STRA (NUC071 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C932_9STRA)

HSP 1 Score: 670 bits (1729), Expect = 5.190e-220
Identity = 308/364 (84.62%), Postives = 346/364 (95.05%), Query Frame = 1
Query:   10 QVGIEFMDLYSHLIPVYEVEPLEKITDAYLDQYLWFEADKRHLFPNWVKPSDAEPPPLLVYKWCQGINNVSDVWQTDGGECVVMLQAKLEKVYEKVDLTLLNRLMRLIVDHNIADYMTGKNNVVLAYKDMMHTNNYGLIRGLQFSSFVFQYYGLVLDLLLLGLTRASDIAGSPAMPNPFLTYRDAAVEARHPIRLYMRYVDQIFMVFRFDAEDARELIQRYLTEHPDPNNENVVGYNNKKCWPRDCRMRLMKHDVNLGRATFWDIKNRLPRSVTTVEWENSFVSVYSKDNPNLLFDMVGFEVRIKPKCRMIGEAPVHADGVWKLQNDLTKEMTAQGFLRVDESSLRSFEHRVRQILMSSGRTTF 1101
            +VGIEFMDLYSHLIPV+E+EPLEKITDAYLDQY+WFEADKR+LFPNWVKPSD EPPPLLVYKWCQG+NNV+DVW T  G+CVVML+ +LEKVYEKVDLTLLNRL+RLIVDHNIADYMT KNNVV++YKDMMHTN+YGL+RGLQF+SFVFQYYGLVLDLLLLGLTRA++IAG P +PN +L YRD A EARHPIRLY RY+D+++M+FRFDAED+R+LIQRYLTEHPDPNNENVVGYNN+KCWPRDCRMRLMKHDVNLGRATFWDIKNRLPRSVTT+EW NSFVSVYS+DNPN+LF+M GFEVRIKPKCRM+GEAPVHADGVWKLQND TKEMTAQ FLRVD++S+R+FE+RVRQILMSSG TTF
Sbjct:  939 EVGIEFMDLYSHLIPVHEIEPLEKITDAYLDQYIWFEADKRNLFPNWVKPSDQEPPPLLVYKWCQGLNNVTDVWDTSAGQCVVMLETRLEKVYEKVDLTLLNRLLRLIVDHNIADYMTAKNNVVVSYKDMMHTNSYGLVRGLQFASFVFQYYGLVLDLLLLGLTRATEIAGPPQIPNQYLCYRDTATEARHPIRLYTRYIDKVYMLFRFDAEDSRDLIQRYLTEHPDPNNENVVGYNNRKCWPRDCRMRLMKHDVNLGRATFWDIKNRLPRSVTTIEWNNSFVSVYSRDNPNVLFNMCGFEVRIKPKCRMLGEAPVHADGVWKLQNDATKEMTAQAFLRVDDTSIRTFENRVRQILMSSGSTTF 1302          
BLAST of mRNA_P-wetherbeei_contig12167.1.1 vs. uniprot
Match: UPI00064A36EB (pre-mRNA-splicing factor 8 homolog n=1 Tax=Sorex araneus TaxID=42254 RepID=UPI00064A36EB)

HSP 1 Score: 616 bits (1588), Expect = 8.650e-220
Identity = 285/364 (78.30%), Postives = 326/364 (89.56%), Query Frame = 1
Query:   10 QVGIEFMDLYSHLIPVYEVEPLEKITDAYLDQYLWFEADKRHLFPNWVKPSDAEPPPLLVYKWCQGINNVSDVWQTDGGECVVMLQAKLEKVYEKVDLTLLNRLMRLIVDHNIADYMTGKNNVVLAYKDMMHTNNYGLIRGLQFSSFVFQYYGLVLDLLLLGLTRASDIAGSPAMPNPFLTYRDAAVEARHPIRLYMRYVDQIFMVFRFDAEDARELIQRYLTEHPDPNNENVVGYNNKKCWPRDCRMRLMKHDVNLGRATFWDIKNRLPRSVTTVEWENSFVSVYSKDNPNLLFDMVGFEVRIKPKCRMIGEAPVHADGVWKLQNDLTKEMTAQGFLRVDESSLRSFEHRVRQILMSSGRTTF 1101
            +VGIEFMDLYSHLIPVY++EPLEK+TDAYLDQYLW+EADKR LFP+WVKP+D+EPPPLLVYKWCQGINN+ DVW+T+ G+C V+L+AK EK+YEK+DLTLLNRL+RLIVDHNIADYMT KNNVV+ YKDM HTN+YG+IRGLQFSSF+ QYYG+VLDLLLLGL RAS+IAG P  PN FLTY+D + E  HPIRLY RY+D+++M FRFDAE+AR+LIQRYLTEHPDPNNEN+VGYNNKKCWPRD RMRLMKHDVNLGRA FWDIKNRLPRSVTT+EWE+SFVSVYSKDNPNLLFDM GFE RI PKCRM  E  VH DGVW LQN++TKE T+Q +LRVD+ SL  F +RVRQILM+SG TTF
Sbjct:   35 EVGIEFMDLYSHLIPVYDIEPLEKVTDAYLDQYLWYEADKRRLFPHWVKPADSEPPPLLVYKWCQGINNLQDVWETNNGQCNVVLEAKFEKLYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFSSFIVQYYGMVLDLLLLGLRRASEIAGPPQCPNDFLTYQDVSTETGHPIRLYCRYIDRVWMFFRFDAEEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDSRMRLMKHDVNLGRAVFWDIKNRLPRSVTTIEWESSFVSVYSKDNPNLLFDMAGFECRILPKCRMGHEDFVHRDGVWNLQNEVTKERTSQCYLRVDDESLGRFHNRVRQILMASGSTTF 398          
BLAST of mRNA_P-wetherbeei_contig12167.1.1 vs. uniprot
Match: A0A482RQT9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RQT9_9ARCH)

HSP 1 Score: 610 bits (1574), Expect = 6.180e-216
Identity = 277/364 (76.10%), Postives = 329/364 (90.38%), Query Frame = 1
Query:   10 QVGIEFMDLYSHLIPVYEVEPLEKITDAYLDQYLWFEADKRHLFPNWVKPSDAEPPPLLVYKWCQGINNVSDVWQTDGGECVVMLQAKLEKVYEKVDLTLLNRLMRLIVDHNIADYMTGKNNVVLAYKDMMHTNNYGLIRGLQFSSFVFQYYGLVLDLLLLGLTRASDIAGSPAMPNPFLTYRDAAVEARHPIRLYMRYVDQIFMVFRFDAEDARELIQRYLTEHPDPNNENVVGYNNKKCWPRDCRMRLMKHDVNLGRATFWDIKNRLPRSVTTVEWENSFVSVYSKDNPNLLFDMVGFEVRIKPKCRMIGEAPVHADGVWKLQNDLTKEMTAQGFLRVDESSLRSFEHRVRQILMSSGRTTF 1101
            +V IEFMD YSHL+PVY +EPLEKITDAYLDQYLW+EADKR LFP+W+KP+D+EP PLL YK+CQG+NN+ +VW TD GECVV+LQ+ LE VYEK+DLTLLNRL+RLI+DHNIADYMT KNNVV+++KDMMHTN YGL+RGLQF+SFVFQYYGL+LDLLLLGLTRAS+I+G P +PN +L Y+D   E RHPIRLY RY+D+I++V RFDA++A+E+IQRYLTEHPDPNNENVVGYNNKKCWPRD RMRLMKHDVNLGRA FWDIKNRLPRS+TT++W NSFVSV+SKDNPNLLFDM GFE+RI+PK RM+ EAPV+ DGVW LQN+ +KEMTAQ +LRV +S++R FE+RVRQILMSSG+TTF
Sbjct:  110 EVSIEFMDQYSHLVPVYSIEPLEKITDAYLDQYLWYEADKRSLFPSWIKPADSEPAPLLAYKFCQGVNNLHEVWNTDKGECVVLLQSTLESVYEKIDLTLLNRLLRLIMDHNIADYMTAKNNVVISFKDMMHTNTYGLVRGLQFASFVFQYYGLILDLLLLGLTRASEISGPPEVPNNYLAYKDLQAEIRHPIRLYTRYIDRIYLVLRFDADEAKEIIQRYLTEHPDPNNENVVGYNNKKCWPRDQRMRLMKHDVNLGRAVFWDIKNRLPRSLTTLDWNNSFVSVFSKDNPNLLFDMAGFEIRIRPKVRMLNEAPVYKDGVWNLQNEASKEMTAQAYLRVSDSAMRIFENRVRQILMSSGQTTF 473          
BLAST of mRNA_P-wetherbeei_contig12167.1.1 vs. uniprot
Match: A0A7S3Y066_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y066_HETAK)

HSP 1 Score: 645 bits (1664), Expect = 1.520e-213
Identity = 297/364 (81.59%), Postives = 335/364 (92.03%), Query Frame = 1
Query:   10 QVGIEFMDLYSHLIPVYEVEPLEKITDAYLDQYLWFEADKRHLFPNWVKPSDAEPPPLLVYKWCQGINNVSDVWQTDGGECVVMLQAKLEKVYEKVDLTLLNRLMRLIVDHNIADYMTGKNNVVLAYKDMMHTNNYGLIRGLQFSSFVFQYYGLVLDLLLLGLTRASDIAGSPAMPNPFLTYRDAAVEARHPIRLYMRYVDQIFMVFRFDAEDARELIQRYLTEHPDPNNENVVGYNNKKCWPRDCRMRLMKHDVNLGRATFWDIKNRLPRSVTTVEWENSFVSVYSKDNPNLLFDMVGFEVRIKPKCRMIGEAPVHADGVWKLQNDLTKEMTAQGFLRVDESSLRSFEHRVRQILMSSGRTTF 1101
            +V ++FMDLYSHL+PVYE+EPLEKITD+YLDQYLW+EADKRHLFPNWVKP+D+EPPPLLVYKWC G NN+ D W+T  GECVVML+ KLEKVYEKVDLTLLNRL+RLIVDHNIADYMT KNNVV++YKDMMHTN+YG++RGLQFSSF+FQYYGLVLDLLLLGLTRAS+IAG P +PN +LT++D A E RHP+RLY RYVD+++++FRF+AEDARELIQRYLTEHPDPNNENVVGYNNKKCWPRDCRMRLMKHDVNLGRATFWD+KNRLPRSVTTVEW+NSFVSVYSKDNPNLLF+M GFE RIKPKCRM  E P H DGVW LQN+ TKEMTAQ FLRVD+ SLR FE+R+RQILMSSG TTF
Sbjct:  488 EVRLQFMDLYSHLVPVYEIEPLEKITDSYLDQYLWYEADKRHLFPNWVKPADSEPPPLLVYKWCTGANNLHDAWETKDGECVVMLETKLEKVYEKVDLTLLNRLLRLIVDHNIADYMTAKNNVVVSYKDMMHTNSYGVVRGLQFSSFIFQYYGLVLDLLLLGLTRASEIAGPPQVPNEYLTFQDTATETRHPVRLYTRYVDKVYVLFRFEAEDARELIQRYLTEHPDPNNENVVGYNNKKCWPRDCRMRLMKHDVNLGRATFWDVKNRLPRSVTTVEWDNSFVSVYSKDNPNLLFNMSGFECRIKPKCRMHLETPQHKDGVWNLQNEATKEMTAQCFLRVDDYSLRQFENRIRQILMSSGSTTF 851          
BLAST of mRNA_P-wetherbeei_contig12167.1.1 vs. uniprot
Match: A0A6H5K085_9PHAE (MPN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K085_9PHAE)

HSP 1 Score: 653 bits (1685), Expect = 2.190e-213
Identity = 301/364 (82.69%), Postives = 344/364 (94.51%), Query Frame = 1
Query:   10 QVGIEFMDLYSHLIPVYEVEPLEKITDAYLDQYLWFEADKRHLFPNWVKPSDAEPPPLLVYKWCQGINNVSDVWQTDGGECVVMLQAKLEKVYEKVDLTLLNRLMRLIVDHNIADYMTGKNNVVLAYKDMMHTNNYGLIRGLQFSSFVFQYYGLVLDLLLLGLTRASDIAGSPAMPNPFLTYRDAAVEARHPIRLYMRYVDQIFMVFRFDAEDARELIQRYLTEHPDPNNENVVGYNNKKCWPRDCRMRLMKHDVNLGRATFWDIKNRLPRSVTTVEWENSFVSVYSKDNPNLLFDMVGFEVRIKPKCRMIGEAPVHADGVWKLQNDLTKEMTAQGFLRVDESSLRSFEHRVRQILMSSGRTTF 1101
            +VGIEFMDLYSHLIPVY +EPLEKITDAYLDQYLW+EADKRHLFPNW+KPSD+EPPPLLVYKW QGINN+S+VW+T+ GECVVML+ KLEKVYEKVDLT+LNRL+RLIVDHNIADYMT KNNV+++YKDMMHTN+YGL+RGLQF+SF+FQYYGLVLDLLLLGLTRAS+IAG P MPN +L++RD   E RHPIRLY RYVD+I+M+FRFDAE+AR+LIQRYLTEHPDPNNENVVGYNN+KCWPRD RMRLMKHDVNLGRATFWDIKNRLPRSVTTVEW++SFVSVYS+DNPNLL++M GFEVRIKP+ RM+GEA VHADGVWKLQND TKEMTAQ FLRVD++S+R+FE+R+RQ+LMSSG TTF
Sbjct: 1000 EVGIEFMDLYSHLIPVYHLEPLEKITDAYLDQYLWYEADKRHLFPNWIKPSDSEPPPLLVYKWSQGINNLSEVWETEAGECVVMLETKLEKVYEKVDLTMLNRLLRLIVDHNIADYMTAKNNVMISYKDMMHTNSYGLVRGLQFASFIFQYYGLVLDLLLLGLTRASEIAGPPTMPNQYLSFRDTPTEMRHPIRLYTRYVDKIYMLFRFDAEEARDLIQRYLTEHPDPNNENVVGYNNRKCWPRDQRMRLMKHDVNLGRATFWDIKNRLPRSVTTVEWDDSFVSVYSRDNPNLLYNMSGFEVRIKPRIRMLGEAAVHADGVWKLQNDSTKEMTAQAFLRVDDTSIRTFENRIRQVLMSSGSTTF 1363          
BLAST of mRNA_P-wetherbeei_contig12167.1.1 vs. uniprot
Match: F0YIE3_AURAN (MPN domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIE3_AURAN)

HSP 1 Score: 651 bits (1679), Expect = 7.590e-213
Identity = 300/364 (82.42%), Postives = 335/364 (92.03%), Query Frame = 1
Query:   10 QVGIEFMDLYSHLIPVYEVEPLEKITDAYLDQYLWFEADKRHLFPNWVKPSDAEPPPLLVYKWCQGINNVSDVWQTDGGECVVMLQAKLEKVYEKVDLTLLNRLMRLIVDHNIADYMTGKNNVVLAYKDMMHTNNYGLIRGLQFSSFVFQYYGLVLDLLLLGLTRASDIAGSPAMPNPFLTYRDAAVEARHPIRLYMRYVDQIFMVFRFDAEDARELIQRYLTEHPDPNNENVVGYNNKKCWPRDCRMRLMKHDVNLGRATFWDIKNRLPRSVTTVEWENSFVSVYSKDNPNLLFDMVGFEVRIKPKCRMIGEAPVHADGVWKLQNDLTKEMTAQGFLRVDESSLRSFEHRVRQILMSSGRTTF 1101
            +VGI+FMDLYSHLIPVYEVEPLEKITDAYLDQYLW+EADKRHLFPNW+KP+D+EPPPLL YKWCQG+NN+  VW TD GECVVM++ KLEKVYEK+DLTLLNRL+RLIVDHNIADYMT KNNV +AYKDMMHTN+YGL+RGLQF+SFVFQYYGLVLDLL+LGLTRAS+IAG P +PN +L+Y+D + E RHPIRLY RYVDQ+F + RFDA+DAR+LIQRYLTEHPDPNNENVVGYNNKKCWPRD RMRLMKHDVNLGRATFWD+KNRLPRSVTT++WENSFVSVYSKDNPNLLF+M GFEVR+KPKCRM  EA  H DGVW LQND TKEMTAQ FLRVDE SLR+FE+RVRQ+LMSSG TTF
Sbjct:  930 EVGIQFMDLYSHLIPVYEVEPLEKITDAYLDQYLWYEADKRHLFPNWIKPADSEPPPLLCYKWCQGVNNLDKVWDTDAGECVVMMETKLEKVYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVTVAYKDMMHTNSYGLVRGLQFASFVFQYYGLVLDLLVLGLTRASEIAGPPQVPNEYLSYKDVSTETRHPIRLYTRYVDQVFFLLRFDADDARDLIQRYLTEHPDPNNENVVGYNNKKCWPRDQRMRLMKHDVNLGRATFWDVKNRLPRSVTTIDWENSFVSVYSKDNPNLLFNMCGFEVRVKPKCRMHLEALAHRDGVWNLQNDATKEMTAQAFLRVDEQSLRTFENRVRQVLMSSGSTTF 1293          
BLAST of mRNA_P-wetherbeei_contig12167.1.1 vs. uniprot
Match: A0A7S3MFK4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MFK4_9STRA)

HSP 1 Score: 620 bits (1598), Expect = 9.170e-213
Identity = 280/364 (76.92%), Postives = 329/364 (90.38%), Query Frame = 1
Query:   10 QVGIEFMDLYSHLIPVYEVEPLEKITDAYLDQYLWFEADKRHLFPNWVKPSDAEPPPLLVYKWCQGINNVSDVWQTDGGECVVMLQAKLEKVYEKVDLTLLNRLMRLIVDHNIADYMTGKNNVVLAYKDMMHTNNYGLIRGLQFSSFVFQYYGLVLDLLLLGLTRASDIAGSPAMPNPFLTYRDAAVEARHPIRLYMRYVDQIFMVFRFDAEDARELIQRYLTEHPDPNNENVVGYNNKKCWPRDCRMRLMKHDVNLGRATFWDIKNRLPRSVTTVEWENSFVSVYSKDNPNLLFDMVGFEVRIKPKCRMIGEAPVHADGVWKLQNDLTKEMTAQGFLRVDESSLRSFEHRVRQILMSSGRTTF 1101
            +V IEFMD YSHLIPVYE+EPLEKITDAYLD YLWFEADKR+LFP+W+KPSD EP PLL YKWCQG+NN+ DVW TD GECVV+L++ LE VYEK+DLTLLNRL+RLI+DHNIADYMT KNN+V+A+KDMMHTN YGLIRGLQF+SFV QYYGL+LDLLLLGLTRAS+IAG P +PN +L ++D   E RHPIRLY RY+D+I+M+ RFDAEDA+++IQRYLTEHPDPNNENVVGYNNKKCWPRDCRMRLMKHDVNLGRA FWDIKNRLPRS+TT+EW+NSFVSVYSKDNPNLLFDM GFE+RIKPK RM+ +AP++ DG+W LQN+ +KEMTAQ FLRV +++++ FE+R+RQ+LMSSG TTF
Sbjct:   38 EVSIEFMDQYSHLIPVYEIEPLEKITDAYLDHYLWFEADKRNLFPSWIKPSDNEPTPLLAYKWCQGVNNLHDVWSTDNGECVVLLESVLENVYEKIDLTLLNRLLRLILDHNIADYMTSKNNIVIAFKDMMHTNTYGLIRGLQFASFVTQYYGLILDLLLLGLTRASEIAGPPEVPNGYLAFKDVPTEVRHPIRLYTRYIDRIYMLLRFDAEDAKDIIQRYLTEHPDPNNENVVGYNNKKCWPRDCRMRLMKHDVNLGRAVFWDIKNRLPRSMTTLEWDNSFVSVYSKDNPNLLFDMSGFEIRIKPKIRMLHDAPMYRDGIWNLQNEASKEMTAQAFLRVSDNAMKFFENRIRQVLMSSGSTTF 401          
BLAST of mRNA_P-wetherbeei_contig12167.1.1 vs. uniprot
Match: A0A1B6KND0_9HEMI (Uncharacterized protein (Fragment) n=1 Tax=Graphocephala atropunctata TaxID=36148 RepID=A0A1B6KND0_9HEMI)

HSP 1 Score: 600 bits (1547), Expect = 7.310e-212
Identity = 279/364 (76.65%), Postives = 317/364 (87.09%), Query Frame = 1
Query:   10 QVGIEFMDLYSHLIPVYEVEPLEKITDAYLDQYLWFEADKRHLFPNWVKPSDAEPPPLLVYKWCQGINNVSDVWQTDGGECVVMLQAKLEKVYEKVDLTLLNRLMRLIVDHNIADYMTGKNNVVLAYKDMMHTNNYGLIRGLQFSSFVFQYYGLVLDLLLLGLTRASDIAGSPAMPNPFLTYRDAAVEARHPIRLYMRYVDQIFMVFRFDAEDARELIQRYLTEHPDPNNENVVGYNNKKCWPRDCRMRLMKHDVNLGRATFWDIKNRLPRSVTTVEWENSFVSVYSKDNPNLLFDMVGFEVRIKPKCRMIGEAPVHADGVWKLQNDLTKEMTAQGFLRVDESSLRSFEHRVRQILMSSGRTTF 1101
            +VGIEFMDLYSHL+PVY+VEPLEKITDAYLDQYLW+EADKR LFP WVKPSD EPPPLLVYKWCQGINN+ DVW     EC V+L++K EK+YEK+DLTLLNRL+RLIVDHNIADYMT KNNVV+ YKDM HTN+YG+IRGLQF+SF+ QYYGLVLDLL+LGL RAS++AG P MPN FLT++D   EA HPIRL+ RY+D++ + FRF AE+AR+LIQRYLTEHPDPNNEN+VGYNNKKCWPRD RMRLMKHDVNLGRA FWDIKNRLPRS TT++WENSFVSVYSKDNPNLLF+M GFE RI PKCR   E   H DGVW LQN++TKE TAQ FLRVD+ SL+ F +RVRQILM+SG TTF
Sbjct:   80 EVGIEFMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWVKPSDTEPPPLLVYKWCQGINNLQDVWDVSEAECNVLLESKFEKIYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFIVQYYGLVLDLLVLGLQRASEMAGPPQMPNDFLTFQDINTEAAHPIRLFCRYIDRVHIFFRFTAEEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSTTTIQWENSFVSVYSKDNPNLLFNMSGFECRILPKCRTTHEEFKHLDGVWNLQNEVTKERTAQCFLRVDDESLQRFHNRVRQILMASGSTTF 443          
BLAST of mRNA_P-wetherbeei_contig12167.1.1 vs. uniprot
Match: A0A6A5AUD0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AUD0_9STRA)

HSP 1 Score: 614 bits (1584), Expect = 2.480e-208
Identity = 278/364 (76.37%), Postives = 328/364 (90.11%), Query Frame = 1
Query:   10 QVGIEFMDLYSHLIPVYEVEPLEKITDAYLDQYLWFEADKRHLFPNWVKPSDAEPPPLLVYKWCQGINNVSDVWQTDGGECVVMLQAKLEKVYEKVDLTLLNRLMRLIVDHNIADYMTGKNNVVLAYKDMMHTNNYGLIRGLQFSSFVFQYYGLVLDLLLLGLTRASDIAGSPAMPNPFLTYRDAAVEARHPIRLYMRYVDQIFMVFRFDAEDARELIQRYLTEHPDPNNENVVGYNNKKCWPRDCRMRLMKHDVNLGRATFWDIKNRLPRSVTTVEWENSFVSVYSKDNPNLLFDMVGFEVRIKPKCRMIGEAPVHADGVWKLQNDLTKEMTAQGFLRVDESSLRSFEHRVRQILMSSGRTTF 1101
            ++ IEFMDLYSHLIPVYE+EPLEKITDAYLDQYLW+EADKRHLFP+W+KPSDAEPPPLLVYKWCQGINN+ +VW  D GECVVML+ KLEKV EK+DLTLLNRL+RL++DHN+ADYMT KNN+VLAYKDMMHTN+YGLIRGLQF SF++QYYGLVLDLLLLGLTRAS+IAG P  PN +LT++D   E  HPIR+Y RY+D++++V++FDA D+RELIQRYLTEHPDPNNEN+VGYNNKKCWPRD RMRLMKHDVNLGRATFWD++NRLPRS+TT++W++SFVSVYSKDNPNLLF+M GFEVR+ P+ R + +   H DGVW LQNDLTKE TAQ +LRVDE ++++FE+RVR ILMSSG TTF
Sbjct:  790 EMSIEFMDLYSHLIPVYEIEPLEKITDAYLDQYLWYEADKRHLFPSWIKPSDAEPPPLLVYKWCQGINNLHNVWACDAGECVVMLETKLEKVAEKMDLTLLNRLLRLVLDHNMADYMTAKNNIVLAYKDMMHTNSYGLIRGLQFGSFIYQYYGLVLDLLLLGLTRASEIAGPPHFPNEYLTFKDTETETHHPIRMYTRYIDRLYVVYKFDAADSRELIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRATFWDMQNRLPRSITTLDWDHSFVSVYSKDNPNLLFNMCGFEVRVLPRVRALEDEFAHKDGVWNLQNDLTKERTAQAYLRVDEDAIKTFENRVRSILMSSGSTTF 1153          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12167.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2STJ4_9STRA4.530e-22180.22Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A836C932_9STRA5.190e-22084.62NUC071 domain-containing protein n=1 Tax=Tribonema... [more]
UPI00064A36EB8.650e-22078.30pre-mRNA-splicing factor 8 homolog n=1 Tax=Sorex a... [more]
A0A482RQT9_9ARCH6.180e-21676.10Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S3Y066_HETAK1.520e-21381.59Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6H5K085_9PHAE2.190e-21382.69MPN domain-containing protein n=2 Tax=Ectocarpus T... [more]
F0YIE3_AURAN7.590e-21382.42MPN domain-containing protein n=1 Tax=Aureococcus ... [more]
A0A7S3MFK4_9STRA9.170e-21376.92Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A1B6KND0_9HEMI7.310e-21276.65Uncharacterized protein (Fragment) n=1 Tax=Graphoc... [more]
A0A6A5AUD0_9STRA2.480e-20876.37Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12167contigP-wetherbeei_contig12167:116..2032 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LLJ8
PFAMsJAB,PRO8NT,PROCN,PROCT,PRP8_domainIV,RRM_4,U5_2-snRNA_bdg,U6-snRNA_bdg
Model size1101
Max annot lvl2759|Eukaryota
KEGG koko:K12856
KEGG Pathwayko03040,map03040
KEGG ModuleM00354,M00355
Hectar predicted targeting categoryother localisation
GOsGO:0000244,GO:0000375,GO:0000377,GO:0000386,GO:0000387,GO:0000398,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005681,GO:0005682,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016071,GO:0017069,GO:0017070,GO:0022607,GO:0022613,GO:0022618,GO:0030532,GO:0030619,GO:0030620,GO:0030623,GO:0032991,GO:0034622,GO:0034641,GO:0036002,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0071013,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097157,GO:0097159,GO:0097525,GO:0120114,GO:0140098,GO:1901360,GO:1901363,GO:1902494,GO:1990904
Exons4
Evalue3.92e-212
EggNOG OGsCOG5178@1|root,KOG1795@2759|Eukaryota
DescriptionU5 snRNA binding
Cds size1074
COG categoryA
BRITEko00000,ko00001,ko00002,ko03041
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185939.761875-UTR-P-wetherbeei_contig12167:115..1421683185939.761875-UTR-P-wetherbeei_contig12167:115..142Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig12167 116..142 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185939.7889636-CDS-P-wetherbeei_contig12167:142..4901683185939.7889636-CDS-P-wetherbeei_contig12167:142..490Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12167 143..490 +
1683185939.8035724-CDS-P-wetherbeei_contig12167:757..9971683185939.8035724-CDS-P-wetherbeei_contig12167:757..997Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12167 758..997 +
1683185939.8119087-CDS-P-wetherbeei_contig12167:1239..14971683185939.8119087-CDS-P-wetherbeei_contig12167:1239..1497Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12167 1240..1497 +
1683185939.8204508-CDS-P-wetherbeei_contig12167:1804..20321683185939.8204508-CDS-P-wetherbeei_contig12167:1804..2032Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12167 1805..2032 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12167.1.1prot_P-wetherbeei_contig12167.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12167 143..2032 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12167.1.1

>prot_P-wetherbeei_contig12167.1.1 ID=prot_P-wetherbeei_contig12167.1.1|Name=mRNA_P-wetherbeei_contig12167.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=358bp
MDLYSHLIPVYEVEPLEKITDAYLDQYLWFEADKRHLFPNWVKPSDAEPP
PLLVYKWCQGINNVSDVWQTDGGECVVMLQAKLEKVYEKVDLTLLNRLMR
LIVDHNIADYMTGKNNVVLAYKDMMHTNNYGLIRGLQFSSFVFQYYGLVL
DLLLLGLTRASDIAGSPAMPNPFLTYRDAAVEARHPIRLYMRYVDQIFMV
FRFDAEDARELIQRYLTEHPDPNNENVVGYNNKKCWPRDCRMRLMKHDVN
LGRATFWDIKNRLPRSVTTVEWENSFVSVYSKDNPNLLFDMVGFEVRIKP
KCRMIGEAPVHADGVWKLQNDLTKEMTAQGFLRVDESSLRSFEHRVRQIL
MSSGRTTF
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mRNA from alignment at P-wetherbeei_contig12167:116..2032+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12167.1.1 ID=mRNA_P-wetherbeei_contig12167.1.1|Name=mRNA_P-wetherbeei_contig12167.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1917bp|location=Sequence derived from alignment at P-wetherbeei_contig12167:116..2032+ (Phaeothamnion wetherbeei SAG_119_79)
GGGTCTCCCCAGGTGGGCATCGAGTTCATGGACCTGTACTCGCACCTGAT CCCAGTGTACGAGGTGGAGCCGCTGGAGAAGATCACGGACGCGTACCTCG ACCAGTACCTTTGGTTCGAGGCGGACAAGCGGCACCTCTTCCCCAACTGG GTCAAGCCAAGCGACGCCGAACCGCCGCCGCTGCTCGTCTACAAGTGGTG TCAGGGCATCAACAACGTGTCGGACGTGTGGCAGACAGATGGCGGCGAGT GCGTGGTCATGTTGCAGGCCAAGCTCGAGAAGGTGTACGAGAAGGTCGAC CTGACGCTGCTCAACCGTCTCATGCGCCTCATCGTCGACCACAACATTGC CGACTACATGACGGGCAAGAACAACGTGCGTCGATATTCGATTAGTCTTA AGTCGGTTATGACAATAGTGCCATCCCGAGTCAGTTACAAATCAGCCATT AACTCTTTCCAACCGTTTGACGGAATGATGGTCGCGACAGTACCCATATC AGTACGACGGGCCGTTAGTTTTGACTGCCACCGCTCCATCGAGACTGTCT TTCTCTTTTGGCTGCCAGTACCGGGGCTAACTCCTCTTTTTCCGCTGCAA CCATTATAAATTGTCCCCAACCGCCGCCAAACGTACAAACAGGTGGTGCT CGCATACAAGGACATGATGCACACCAATAACTATGGGCTGATCCGCGGGC TGCAATTCAGCTCGTTCGTGTTCCAGTACTATGGGCTGGTGCTCGACCTG CTGCTGCTCGGGCTGACGCGGGCCAGCGACATCGCCGGCTCTCCGGCCAT GCCTAACCCCTTCCTCACGTACCGCGACGCCGCTGTCGAGGCGCGCCACC CCATTCGCCTCTACATGCGCTACGTCGACCAGGTCCGATTGGAGGAGCAA GGAGTAGAGAAGCGTGCTGGTTTAGCGGGTTTCGGTTTGGATTGGTTTCT TTGGTTATTTGGTTGGTTGCGGTCCTTCTCGTTATCCTGGCCTCGCTCGA GTCTTCATGCTTGCCGGACGTTCTCACGTTTCCCACTCCGCGCTTCCCTT TCTCGGCGACCCCAATCTGCTACCTCCCACCCACTGCTTCTCTCCTACTT CTTGCCTTCCTGACTTGTGCACAGATCTTCATGGTGTTCCGGTTCGACGC GGAGGACGCGCGCGAGCTGATTCAGCGCTACCTGACGGAGCACCCAGACC CCAACAACGAGAATGTGGTGGGCTACAACAACAAAAAGTGCTGGCCGCGC GACTGCCGCATGCGCCTCATGAAGCACGACGTCAACCTCGGGCGGGCCAC CTTCTGGGACATAAAGAACCGCCTGCCGCGCTCCGTCACAACGGTCGAGT GGGAGAACTCTTTCGTCTCCGTCTACTCCAAGGTGGGTCTGTTAAGCCCG CAAAGGGATTTCTGACTGCTGCAACTGTTACGTGTTTGAATCAGGGGAGT GTGAATGCTGTTCTGGATTTAGCTGCATGAGTTTCACACTAGTGTTGGTT TTGGAAATCTCGTAGAGCTGCCGGGCAGCCGCACACAGGCTTGGGAGAGT GGTGGGGGCAGGGCTTGGATAGCGCCGCGGCAAGCGCGAACTGGATTTGT AACGCTGTTCTCGCTTTTTCGCCGTATGCTCTGTTTTCGCATCTGTCTCT TCGTCGGCCGCTATTGCAATCGGCCCTTGCATTCTGCAGGACAACCCGAA CCTGCTGTTCGACATGGTGGGATTCGAGGTGCGCATCAAGCCCAAGTGCC GCATGATCGGCGAGGCGCCCGTGCATGCCGACGGCGTCTGGAAGCTGCAG AACGACCTCACCAAGGAGATGACGGCGCAGGGCTTCCTGCGGGTGGACGA GTCCAGCCTGCGCTCTTTCGAGCACCGCGTGCGCCAGATCCTCATGAGCA GCGGCCGCACGACGTTC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig12167:116..2032+

>mRNA_P-wetherbeei_contig12167.1.1 ID=mRNA_P-wetherbeei_contig12167.1.1|Name=mRNA_P-wetherbeei_contig12167.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1074bp|location=Sequence derived from alignment at P-wetherbeei_contig12167:116..2032+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGACCTGTACTCGCACCTGATCCCAGTGTACGAGGTGGAGCCGCTGGA
GAAGATCACGGACGCGTACCTCGACCAGTACCTTTGGTTCGAGGCGGACA
AGCGGCACCTCTTCCCCAACTGGGTCAAGCCAAGCGACGCCGAACCGCCG
CCGCTGCTCGTCTACAAGTGGTGTCAGGGCATCAACAACGTGTCGGACGT
GTGGCAGACAGATGGCGGCGAGTGCGTGGTCATGTTGCAGGCCAAGCTCG
AGAAGGTGTACGAGAAGGTCGACCTGACGCTGCTCAACCGTCTCATGCGC
CTCATCGTCGACCACAACATTGCCGACTACATGACGGGCAAGAACAACGT
GGTGCTCGCATACAAGGACATGATGCACACCAATAACTATGGGCTGATCC
GCGGGCTGCAATTCAGCTCGTTCGTGTTCCAGTACTATGGGCTGGTGCTC
GACCTGCTGCTGCTCGGGCTGACGCGGGCCAGCGACATCGCCGGCTCTCC
GGCCATGCCTAACCCCTTCCTCACGTACCGCGACGCCGCTGTCGAGGCGC
GCCACCCCATTCGCCTCTACATGCGCTACGTCGACCAGATCTTCATGGTG
TTCCGGTTCGACGCGGAGGACGCGCGCGAGCTGATTCAGCGCTACCTGAC
GGAGCACCCAGACCCCAACAACGAGAATGTGGTGGGCTACAACAACAAAA
AGTGCTGGCCGCGCGACTGCCGCATGCGCCTCATGAAGCACGACGTCAAC
CTCGGGCGGGCCACCTTCTGGGACATAAAGAACCGCCTGCCGCGCTCCGT
CACAACGGTCGAGTGGGAGAACTCTTTCGTCTCCGTCTACTCCAAGGACA
ACCCGAACCTGCTGTTCGACATGGTGGGATTCGAGGTGCGCATCAAGCCC
AAGTGCCGCATGATCGGCGAGGCGCCCGTGCATGCCGACGGCGTCTGGAA
GCTGCAGAACGACCTCACCAAGGAGATGACGGCGCAGGGCTTCCTGCGGG
TGGACGAGTCCAGCCTGCGCTCTTTCGAGCACCGCGTGCGCCAGATCCTC
ATGAGCAGCGGCCGCACGACGTTC
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