prot_P-wetherbeei_contig12164.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig12164.1.1
Unique Nameprot_P-wetherbeei_contig12164.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length154
Homology
BLAST of mRNA_P-wetherbeei_contig12164.1.1 vs. uniprot
Match: D7FKD9_ECTSI (MutS protein homolog 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKD9_ECTSI)

HSP 1 Score: 179 bits (453), Expect = 4.230e-50
Identity = 96/149 (64.43%), Postives = 120/149 (80.54%), Query Frame = 0
Query:    4 VRELDEFVLLEEPALQLAAVAVGELDALLALAAVAVDFGLVRPQVVEANVVIIKNGRHPLQSLTVESFIPNDTYIAVPRCRVGIITGATYSGKSVYIKQVGALVFLAHIGCFLPCERAVIGLCDRIYTRIATVESVSVPQSTFTIDLTQ 152
            +REL++ ++ EE AL  AA  + ELDA LALA+VA DFG VRP+VVE NV++IKNGRHPLQ + V+ FIPNDT+IA    RV +ITGA  SGKSVY+KQVG  V+LAH+G F+P E+AVIGL DRI+TRIATVE+ S+PQS+FTID+ Q
Sbjct:  354 MRELEDALIAEEGALHAAASVLAELDAALALASVAGDFGFVRPEVVEDNVIMIKNGRHPLQEMAVDLFIPNDTFIA-DGSRVALITGANCSGKSVYLKQVGVAVYLAHVGSFVPAEKAVIGLTDRIFTRIATVETSSLPQSSFTIDVNQ 501          
BLAST of mRNA_P-wetherbeei_contig12164.1.1 vs. uniprot
Match: A0A4D9D1J2_9STRA (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1J2_9STRA)

HSP 1 Score: 144 bits (362), Expect = 3.270e-37
Identity = 87/176 (49.43%), Postives = 112/176 (63.64%), Query Frame = 0
Query:    4 VRELDEFVLLEEPALQLAAVAVGELDALLALAAVAVDFGLVRPQVVEANVVIIKNGRHPLQSLTVESFIPNDTYI------AVPR---------------CR------VGIITGATYSGKSVYIKQVGALVFLAHIGCFLPCERAVIGLCDRIYTRIATVESVSVPQSTFTIDLTQ 152
            +R+L E +L EE AL  A  A  ELD L+A A +A     VRP V E  VV++K+GRHPLQ LTVE+FIPND ++      AV R               C       V ++TG  +SGKSVYIK VG LV+LAH+GCFLPC++A+IG+ D I TRIA+ E+V+V QS+FTID +Q
Sbjct:  245 LRQLAEEILKEEIALTEAVRACAELDVLMAFAQLAGGLAWVRPMVTEERVVVVKDGRHPLQELTVETFIPNDVFLMGGDGNAVHRDGDDEKHAQKQGLEHCNQNGTRGVAVVTGPNFSGKSVYIKMVGMLVYLAHLGCFLPCQQALIGVVDSIRTRIASAETVTVQQSSFTIDCSQ 420          
BLAST of mRNA_P-wetherbeei_contig12164.1.1 vs. uniprot
Match: W7TMA2_9STRA (Mismatch repair protein 5 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TMA2_9STRA)

HSP 1 Score: 144 bits (363), Expect = 4.880e-37
Identity = 87/176 (49.43%), Postives = 111/176 (63.07%), Query Frame = 0
Query:    4 VRELDEFVLLEEPALQLAAVAVGELDALLALAAVAVDFGLVRPQVVEANVVIIKNGRHPLQSLTVESFIPNDTYI------AVPR---------------CR------VGIITGATYSGKSVYIKQVGALVFLAHIGCFLPCERAVIGLCDRIYTRIATVESVSVPQSTFTIDLTQ 152
            +R+L E +L EE AL  A  A  ELD L+A A +A     VRP V E  VV++K+GRHPLQ LTVE+FIPND ++      AV R               C       V ++TG  +SGKSVYIK VG LV+LAH+GCFLPC +A+IG+ D I TRIA+ E+V+V QS+FTID +Q
Sbjct:  542 LRQLAEEILKEETALAEAVRACAELDVLMAFAQLAGGLAWVRPMVTEERVVVVKDGRHPLQELTVETFIPNDVFLMGGDGNAVHRDGGDEKHAQKQGLEHCNQHGTRGVAVVTGPNFSGKSVYIKMVGVLVYLAHLGCFLPCRQALIGVVDSIRTRIASAETVTVQQSSFTIDCSQ 717          
BLAST of mRNA_P-wetherbeei_contig12164.1.1 vs. uniprot
Match: D8R9G5_SELML (DNA_MISMATCH_REPAIR_2 domain-containing protein (Fragment) n=6 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R9G5_SELML)

HSP 1 Score: 142 bits (357), Expect = 7.080e-37
Identity = 76/151 (50.33%), Postives = 109/151 (72.19%), Query Frame = 0
Query:    2 AAVRELDEFVLLEEPALQLAAVAVGELDALLALAAVAVDFGLVRPQVVEANVVIIKNGRHPLQSLTVESFIPNDTYIAVPRCRVGIITGATYSGKSVYIKQVGALVFLAHIGCFLPCERAVIGLCDRIYTRIATVESVSVPQSTFTIDLTQ 152
            A ++EL+  V   EPA++ +A    +LD L+++A  A ++   RP++VE +++IIKNGRHPLQ LTV++F+PN+T I   + R+ ++TG  YSGKSVYIKQV  +VFL+HIG F+P + AVIG+ DRI+TR+   +S  VPQSTF  DL Q
Sbjct:  211 AILKELESKVQKYEPAVRYSADLTAQLDCLVSMAISAGEYNYNRPRLVEDDILIIKNGRHPLQELTVDTFVPNNTQIE-EKGRICVVTGPNYSGKSVYIKQVALIVFLSHIGSFVPADEAVIGITDRIFTRLPCKQSTKVPQSTFMTDLHQ 360          
BLAST of mRNA_P-wetherbeei_contig12164.1.1 vs. uniprot
Match: D8SEG8_SELML (DNA_MISMATCH_REPAIR_2 domain-containing protein (Fragment) n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SEG8_SELML)

HSP 1 Score: 142 bits (357), Expect = 7.080e-37
Identity = 76/151 (50.33%), Postives = 108/151 (71.52%), Query Frame = 0
Query:    2 AAVRELDEFVLLEEPALQLAAVAVGELDALLALAAVAVDFGLVRPQVVEANVVIIKNGRHPLQSLTVESFIPNDTYIAVPRCRVGIITGATYSGKSVYIKQVGALVFLAHIGCFLPCERAVIGLCDRIYTRIATVESVSVPQSTFTIDLTQ 152
            A ++EL+  V   EPA++ +A    +LD L+++A  A ++   RP++VE +++IIKNGRHPLQ LTV++F+PN+T I   + R+ ++TG  YSGKSVYIKQV  +VFL+HIG F+P + AVIG  DRI+TR+   +S  VPQSTF  DL Q
Sbjct:  211 AILKELESKVQKYEPAVRYSADLTAQLDCLVSMAISAGEYNYNRPRLVEDDILIIKNGRHPLQELTVDTFVPNNTQIE-EKGRISVVTGPNYSGKSVYIKQVALIVFLSHIGSFVPADEAVIGTTDRIFTRLPCKQSTKVPQSTFMTDLHQ 360          
BLAST of mRNA_P-wetherbeei_contig12164.1.1 vs. uniprot
Match: A0A482T1K6_9ARCH (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T1K6_9ARCH)

HSP 1 Score: 139 bits (350), Expect = 1.550e-36
Identity = 75/146 (51.37%), Postives = 105/146 (71.92%), Query Frame = 0
Query:    7 LDEFVLLEEPALQLAAVAVGELDALLALAAVAVDFGLVRPQVVEANVVIIKNGRHPLQSLTVESFIPNDTYIAVPRCRVGIITGATYSGKSVYIKQVGALVFLAHIGCFLPCERAVIGLCDRIYTRIATVESVSVPQSTFTIDLTQ 152
            L+E +L  E ++  A  ++  LDA ++L  +A +  L  P + +  V++IK GRH LQ LTV+SF+PND+ +  P   V +I+G   SGKS+Y+KQVG +V+LAHIG F+PCE+A+IGL D+I TRI T ESVSVPQS+FT+DLTQ
Sbjct:   98 LEEGLLDLEGSIVQATTSIATLDAFISLGIMARECNLSAPHIHDDPVIVIKGGRHLLQELTVDSFVPNDSLLT-PEKNVALISGPNSSGKSIYLKQVGIIVYLAHIGSFVPCEQAIIGLTDKILTRIKTTESVSVPQSSFTMDLTQ 242          
BLAST of mRNA_P-wetherbeei_contig12164.1.1 vs. uniprot
Match: I0YMF5_COCSC (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YMF5_COCSC)

HSP 1 Score: 140 bits (354), Expect = 7.750e-36
Identity = 75/137 (54.74%), Postives = 92/137 (67.15%), Query Frame = 0
Query:   16 PALQLAAVAVGELDALLALAAVAVDFGLVRPQVVEANVVIIKNGRHPLQSLTVESFIPNDTYIAVPRCRVGIITGATYSGKSVYIKQVGALVFLAHIGCFLPCERAVIGLCDRIYTRIATVESVSVPQSTFTIDLTQ 152
            P+L  A     E+D LL+LA  A DFG  RP++ + NV+ IK GRHPL  L V+ FIPNDT +     RV +ITG  YSGKS Y KQV  +VFLAHIG F+P   A +GL DRI+TRI T E+ SVPQS F ID++Q
Sbjct:  546 PSLSRAVALAAEVDCLLSLAQCARDFGYSRPRLTQDNVLHIKQGRHPLAELVVDRFIPNDTAMHADSARVQVITGPNYSGKSCYAKQVALIVFLAHIGSFVPAAEATVGLTDRIFTRIVTTEAQSVPQSAFMIDMSQ 682          
BLAST of mRNA_P-wetherbeei_contig12164.1.1 vs. uniprot
Match: A0A2R6WVC4_MARPO (DNA_MISMATCH_REPAIR_2 domain-containing protein n=3 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WVC4_MARPO)

HSP 1 Score: 134 bits (338), Expect = 3.370e-34
Identity = 69/135 (51.11%), Postives = 96/135 (71.11%), Query Frame = 0
Query:   18 LQLAAVAVGELDALLALAAVAVDFGLVRPQVVEANVVIIKNGRHPLQSLTVESFIPNDTYIAVPRCRVGIITGATYSGKSVYIKQVGALVFLAHIGCFLPCERAVIGLCDRIYTRIATVESVSVPQSTFTIDLTQ 152
            L+ AA    E+D + ALA  A D+G VRP + E +V+II+NGRH LQ +T   ++PNDT+I     R+ I+TG  YSGKS+Y KQV  + FLAHIG F+P ++A+IG+ DRI+TR+A+ E+V + QS+F IDL Q
Sbjct:  217 LESAAKVAAEIDCVTALAIAARDYGYVRPDLREDDVLIIENGRHVLQEMTANRYVPNDTHIT-KEGRINIVTGPNYSGKSIYAKQVALITFLAHIGSFVPADKAIIGIQDRIFTRVASKETVGISQSSFMIDLNQ 350          
BLAST of mRNA_P-wetherbeei_contig12164.1.1 vs. uniprot
Match: A0A8J9SQP3_9CHLO (Probable MutS protein homolog 5 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9SQP3_9CHLO)

HSP 1 Score: 135 bits (341), Expect = 4.430e-34
Identity = 72/137 (52.55%), Postives = 91/137 (66.42%), Query Frame = 0
Query:   16 PALQLAAVAVGELDALLALAAVAVDFGLVRPQVVEANVVIIKNGRHPLQSLTVESFIPNDTYIAVPRCRVGIITGATYSGKSVYIKQVGALVFLAHIGCFLPCERAVIGLCDRIYTRIATVESVSVPQSTFTIDLTQ 152
            P+L  A     E+D LL+LA  A DF   RP++   NV+ IK GRH L  L V+ FIPNDT +     RV +ITG  YSGKS Y KQV  ++FLAHIG F+P   A +GL DRI+TRI T E++SVPQS+F ID++Q
Sbjct:  569 PSLSRAVALAAEVDCLLSLAQCARDFRYNRPKLTSDNVLHIKQGRHALSELVVDQFIPNDTVMHADTARVQVITGPNYSGKSCYAKQVALIIFLAHIGSFVPAAEATVGLTDRIFTRIVTTEALSVPQSSFMIDMSQ 705          
BLAST of mRNA_P-wetherbeei_contig12164.1.1 vs. uniprot
Match: A0A2R6WVE1_MARPO (DNA_MISMATCH_REPAIR_2 domain-containing protein n=5 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WVE1_MARPO)

HSP 1 Score: 134 bits (338), Expect = 1.040e-33
Identity = 69/135 (51.11%), Postives = 96/135 (71.11%), Query Frame = 0
Query:   18 LQLAAVAVGELDALLALAAVAVDFGLVRPQVVEANVVIIKNGRHPLQSLTVESFIPNDTYIAVPRCRVGIITGATYSGKSVYIKQVGALVFLAHIGCFLPCERAVIGLCDRIYTRIATVESVSVPQSTFTIDLTQ 152
            L+ AA    E+D + ALA  A D+G VRP + E +V+II+NGRH LQ +T   ++PNDT+I     R+ I+TG  YSGKS+Y KQV  + FLAHIG F+P ++A+IG+ DRI+TR+A+ E+V + QS+F IDL Q
Sbjct:  549 LESAAKVAAEIDCVTALAIAARDYGYVRPDLREDDVLIIENGRHVLQEMTANRYVPNDTHIT-KEGRINIVTGPNYSGKSIYAKQVALITFLAHIGSFVPADKAIIGIQDRIFTRVASKETVGISQSSFMIDLNQ 682          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12164.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKD9_ECTSI4.230e-5064.43MutS protein homolog 5 n=1 Tax=Ectocarpus siliculo... [more]
A0A4D9D1J2_9STRA3.270e-3749.43DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
W7TMA2_9STRA4.880e-3749.43Mismatch repair protein 5 n=1 Tax=Nannochloropsis ... [more]
D8R9G5_SELML7.080e-3750.33DNA_MISMATCH_REPAIR_2 domain-containing protein (F... [more]
D8SEG8_SELML7.080e-3750.33DNA_MISMATCH_REPAIR_2 domain-containing protein (F... [more]
A0A482T1K6_9ARCH1.550e-3651.37DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
I0YMF5_COCSC7.750e-3654.74DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
A0A2R6WVC4_MARPO3.370e-3451.11DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
A0A8J9SQP3_9CHLO4.430e-3452.55Probable MutS protein homolog 5 n=1 Tax=Coccomyxa ... [more]
A0A2R6WVE1_MARPO1.040e-3351.11DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 43..153
e-value: 7.8E-39
score: 135.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 44..147
IPR000432DNA mismatch repair protein MutS, C-terminalPFAMPF00488MutS_Vcoord: 87..151
e-value: 3.0E-19
score: 69.8
NoneNo IPR availablePANTHERPTHR11361:SF20MUTS PROTEIN HOMOLOG 5coord: 4..152
IPR045076DNA mismatch repair MutS familyPANTHERPTHR11361DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBERcoord: 4..152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12164contigP-wetherbeei_contig12164:2..1036 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12164.1.1mRNA_P-wetherbeei_contig12164.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig12164 2..1482 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig12164.1.1 ID=prot_P-wetherbeei_contig12164.1.1|Name=mRNA_P-wetherbeei_contig12164.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=154bp
AAAVRELDEFVLLEEPALQLAAVAVGELDALLALAAVAVDFGLVRPQVVE
ANVVIIKNGRHPLQSLTVESFIPNDTYIAVPRCRVGIITGATYSGKSVYI
KQVGALVFLAHIGCFLPCERAVIGLCDRIYTRIATVESVSVPQSTFTIDL
TQA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR000432DNA_mismatch_repair_MutS_C
IPR045076MutS_family