prot_P-wetherbeei_contig12160.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig12160.2.1
Unique Nameprot_P-wetherbeei_contig12160.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length139
Homology
BLAST of mRNA_P-wetherbeei_contig12160.2.1 vs. uniprot
Match: A0A1F3YHQ7_9PROT (Outer membrane protein assembly factor BamE n=1 Tax=Betaproteobacteria bacterium RBG_16_66_20 TaxID=1797479 RepID=A0A1F3YHQ7_9PROT)

HSP 1 Score: 135 bits (341), Expect = 1.810e-37
Identity = 61/89 (68.54%), Postives = 76/89 (85.39%), Query Frame = 0
Query:   17 ISAIKPYRIDIQQGNFLSQETVSQLKKGMTREQVRFVLGTPLVTDIFHPDRWDYVYYRELQDGKTDRRNISVFFEQDRLARVSGDVTPA 105
            +  + PYR+ IQQGNF+SQE V+QLK GMT+EQVRFVLGTPLVTDIFH DRWDYV++REL DGK ++RN++V FE+D+L RV GD+ PA
Sbjct:   32 VPGVTPYRMVIQQGNFISQEMVAQLKPGMTKEQVRFVLGTPLVTDIFHADRWDYVFFRELADGKREQRNLAVVFEKDKLVRVLGDLLPA 120          
BLAST of mRNA_P-wetherbeei_contig12160.2.1 vs. uniprot
Match: A0A1F4F102_9PROT (Outer membrane protein assembly factor BamE n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14 TaxID=1797501 RepID=A0A1F4F102_9PROT)

HSP 1 Score: 131 bits (329), Expect = 6.050e-37
Identity = 60/93 (64.52%), Postives = 75/93 (80.65%), Query Frame = 0
Query:   17 ISAIKPYRIDIQQGNFLSQETVSQLKKGMTREQVRFVLGTPLVTDIFHPDRWDYVYYRELQDGKTDRRNISVFFEQDRLARVSGDVTPAAQGQ 109
            I  I PY+++IQQGNF+SQE VSQLK GM++EQVRFVLGTPL+TDIFH +RWDYVY+RE   GK ++R ++VFF   +LAR+ GDV PA  GQ
Sbjct:   20 IPGITPYKMEIQQGNFVSQEMVSQLKPGMSKEQVRFVLGTPLITDIFHGERWDYVYWREDASGKREQRKLAVFFADGKLARLDGDVVPAKAGQ 112          
BLAST of mRNA_P-wetherbeei_contig12160.2.1 vs. uniprot
Match: A0A536SKH9_9PROT (Outer membrane protein assembly factor BamE n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536SKH9_9PROT)

HSP 1 Score: 128 bits (322), Expect = 7.660e-36
Identity = 56/93 (60.22%), Postives = 76/93 (81.72%), Query Frame = 0
Query:   17 ISAIKPYRIDIQQGNFLSQETVSQLKKGMTREQVRFVLGTPLVTDIFHPDRWDYVYYRELQDGKTDRRNISVFFEQDRLARVSGDVTPAAQGQ 109
            I  I PY+ +IQQGN++SQE +SQ+K GMTREQVRF+LGTPL+TDIFH DRWDYVY+RE ++GK + R +++FF+  +LAR++GDV   A G+
Sbjct:   23 IPGITPYQPEIQQGNYVSQEMISQVKPGMTREQVRFILGTPLLTDIFHADRWDYVYWREAENGKRESRRLALFFDDGKLARIAGDVASPATGR 115          
BLAST of mRNA_P-wetherbeei_contig12160.2.1 vs. uniprot
Match: A0A521YUQ2_9PROT (Outer membrane protein assembly factor BamE n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521YUQ2_9PROT)

HSP 1 Score: 127 bits (319), Expect = 2.390e-35
Identity = 58/93 (62.37%), Postives = 74/93 (79.57%), Query Frame = 0
Query:   17 ISAIKPYRIDIQQGNFLSQETVSQLKKGMTREQVRFVLGTPLVTDIFHPDRWDYVYYRELQDGKTDRRNISVFFEQDRLARVSGDVTPAAQGQ 109
            I  I PY+++IQQGNF+SQE VS+LK GMT+EQVRFVLGTPL+TDIFH +RWDYVY+ E Q G  ++R ++VFF+  +LAR+ GDV PA   Q
Sbjct:   26 IPGITPYKMEIQQGNFVSQEMVSKLKPGMTKEQVRFVLGTPLITDIFHGNRWDYVYWHEDQAGNREQRKLAVFFDNGKLARLDGDVVPAKAAQ 118          
BLAST of mRNA_P-wetherbeei_contig12160.2.1 vs. uniprot
Match: A0A1F3XAS7_9PROT (Outer membrane protein assembly factor BamE n=1 Tax=Betaproteobacteria bacterium RBG_16_64_9 TaxID=1797478 RepID=A0A1F3XAS7_9PROT)

HSP 1 Score: 126 bits (317), Expect = 6.490e-35
Identity = 68/126 (53.97%), Postives = 86/126 (68.25%), Query Frame = 0
Query:    3 SACSYLPSMXXXXXISAIKPYRIDIQQGNFLSQETVSQLKKGMTREQVRFVLGTPLVTDIFHPDRWDYVYYRELQDGK-TDRRNISVFFEQDRLARVSGDVTPAAQGQKDAPVPKPATSAPDAPKA 127
            +ACSY+P++          P+RI+IQQGNF+SQE V QLK GMTR+QVRF +GTPLV D+FH DRWDYV+ R+  + +  ++R ISVFFEQD+LAR+ GDV  A         P  ATS P AP A
Sbjct:   14 AACSYIPNL---------SPHRIEIQQGNFVSQEMVGQLKVGMTRDQVRFAMGTPLVADLFHGDRWDYVFVRQRANSREVEQRRISVFFEQDKLARIEGDVVGAR--------PTSATSTPAAPAA 122          
BLAST of mRNA_P-wetherbeei_contig12160.2.1 vs. uniprot
Match: A0A7V8BZD2_9RHOO (Outer membrane protein assembly factor BamE n=1 Tax=Rhodocyclaceae bacterium TaxID=1898103 RepID=A0A7V8BZD2_9RHOO)

HSP 1 Score: 127 bits (319), Expect = 1.020e-34
Identity = 63/111 (56.76%), Postives = 81/111 (72.97%), Query Frame = 0
Query:    2 LSACSYLPSMXXXXXISAIKPYRIDIQQGNFLSQETVSQLKKGMTREQVRFVLGTPLVTDIFHPDRWDYVYYRELQDGKTDRRNISVFFEQDRLARVSGDVTPAAQGQKDA 112
            L+ACS   +M      SA+ PYRIDI+QGN+++QE V+QLK GMTR+QVRF+LGTPLV DIFH DRWDY+Y  +   G+   R  +VFFE +RLARV+GDV  A  G+ +A
Sbjct:   13 LAACS---NMQMPDVASAVTPYRIDIRQGNYVTQEMVAQLKPGMTRDQVRFILGTPLVADIFHADRWDYIYSFKPGRGELQLRRFAVFFEDNRLARVAGDVVGAEPGETEA 120          
BLAST of mRNA_P-wetherbeei_contig12160.2.1 vs. uniprot
Match: A0A1F4DQR4_9PROT (Outer membrane protein assembly factor BamE n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4DQR4_9PROT)

HSP 1 Score: 125 bits (315), Expect = 4.210e-34
Identity = 60/103 (58.25%), Postives = 76/103 (73.79%), Query Frame = 0
Query:    4 ACSYLPSMXXXXXISAIKPYRIDIQQGNFLSQETVSQLKKGMTREQVRFVLGTPLVTDIFHPDRWDYVYYRELQDGK-TDRRNISVFFEQDRLARVSGDVTPA 105
            AC +LP++          P+RI+IQQGNF+SQE V+QLK GMT++QVRF +GTPLV D+FH DRWDYV+ R   D + T+RR ISV+FEQDRL R+ GDV  A
Sbjct:   52 ACGHLPNL---------SPHRIEIQQGNFISQEMVAQLKSGMTKDQVRFAMGTPLVVDVFHGDRWDYVFVRRRADSRDTERRRISVYFEQDRLTRIEGDVVAA 145          
BLAST of mRNA_P-wetherbeei_contig12160.2.1 vs. uniprot
Match: A0A536X8L5_9PROT (Outer membrane protein assembly factor BamE n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536X8L5_9PROT)

HSP 1 Score: 124 bits (310), Expect = 4.940e-34
Identity = 52/93 (55.91%), Postives = 75/93 (80.65%), Query Frame = 0
Query:   17 ISAIKPYRIDIQQGNFLSQETVSQLKKGMTREQVRFVLGTPLVTDIFHPDRWDYVYYRELQDGKTDRRNISVFFEQDRLARVSGDVTPAAQGQ 109
            I  I PY+ +IQQGN++S E ++Q+K GMTREQVRF+LGTPL+TDIFH DRWDY+Y+RE ++GK + R +++FF++ +LAR+ GD+   A G+
Sbjct:   22 IPGITPYKPEIQQGNYVSPELIAQVKPGMTREQVRFLLGTPLLTDIFHADRWDYIYWREAENGKRESRRVALFFDEGKLARIVGDIASPAAGR 114          
BLAST of mRNA_P-wetherbeei_contig12160.2.1 vs. uniprot
Match: A0A6C1B781_9RHOO (Outer membrane protein assembly factor BamE n=1 Tax=Nitrogeniibacter mangrovi TaxID=2016596 RepID=A0A6C1B781_9RHOO)

HSP 1 Score: 125 bits (313), Expect = 5.020e-34
Identity = 57/104 (54.81%), Postives = 81/104 (77.88%), Query Frame = 0
Query:    2 LSACSYLPSMXXXXXISAIKPYRIDIQQGNFLSQETVSQLKKGMTREQVRFVLGTPLVTDIFHPDRWDYVYYRELQDGKTDRRNISVFFEQDRLARVSGDVTPA 105
            L A + L ++        ++PYR+DI+QGNF++Q+ +SQLKKGM+REQVRF LGTPL+TD+FH DRWDYVY  +   G+T++R ++++FE D+LARV+GDVT A
Sbjct:    9 LIAAAVLLTVAGCGVTEKLRPYRLDIRQGNFVTQDMISQLKKGMSREQVRFALGTPLLTDVFHADRWDYVYRFKPGYGETEQRIVTLYFENDKLARVAGDVTAA 112          
BLAST of mRNA_P-wetherbeei_contig12160.2.1 vs. uniprot
Match: A0A7Y8JD77_9RHOO (Outer membrane protein assembly factor BamE n=1 Tax=Rhodocyclaceae bacterium TaxID=1898103 RepID=A0A7Y8JD77_9RHOO)

HSP 1 Score: 124 bits (312), Expect = 5.800e-34
Identity = 58/107 (54.21%), Postives = 77/107 (71.96%), Query Frame = 0
Query:    2 LSACSYLPSMXXXXXISAIKPYRIDIQQGNFLSQETVSQLKKGMTREQVRFVLGTPLVTDIFHPDRWDYVYYRELQDGKTDRRNISVFFEQDRLARVSGDVTPAAQG 108
            L+ACS  P +      S + PYRID++QGN+++QE V++LK GMTR+QVRF LGTPL+TD+FH +RWDYVY  +   G+   R +SVFFE D+L RV GDV  A +G
Sbjct:   17 LAACSSAPDIT-----SRLSPYRIDVRQGNYVTQEMVAKLKPGMTRDQVRFALGTPLITDLFHANRWDYVYRFQPGHGEAQERRLSVFFEDDKLVRVGGDVVAAGEG 118          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12160.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1F3YHQ7_9PROT1.810e-3768.54Outer membrane protein assembly factor BamE n=1 Ta... [more]
A0A1F4F102_9PROT6.050e-3764.52Outer membrane protein assembly factor BamE n=1 Ta... [more]
A0A536SKH9_9PROT7.660e-3660.22Outer membrane protein assembly factor BamE n=1 Ta... [more]
A0A521YUQ2_9PROT2.390e-3562.37Outer membrane protein assembly factor BamE n=1 Ta... [more]
A0A1F3XAS7_9PROT6.490e-3553.97Outer membrane protein assembly factor BamE n=1 Ta... [more]
A0A7V8BZD2_9RHOO1.020e-3456.76Outer membrane protein assembly factor BamE n=1 Ta... [more]
A0A1F4DQR4_9PROT4.210e-3458.25Outer membrane protein assembly factor BamE n=2 Ta... [more]
A0A536X8L5_9PROT4.940e-3455.91Outer membrane protein assembly factor BamE n=1 Ta... [more]
A0A6C1B781_9RHOO5.020e-3454.81Outer membrane protein assembly factor BamE n=1 Ta... [more]
A0A7Y8JD77_9RHOO5.800e-3454.21Outer membrane protein assembly factor BamE n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037873BamE-likeGENE3D3.30.1450.10coord: 29..111
e-value: 3.2E-27
score: 96.3
IPR007450Lipoprotein SmpA/OmlAPFAMPF04355SmpA_OmlAcoord: 30..98
e-value: 8.4E-25
score: 86.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 100..138
IPR026592Outer membrane protein assembly factor BamEPANTHERPTHR37482OUTER MEMBRANE PROTEIN ASSEMBLY FACTOR BAMEcoord: 18..120
IPR026592Outer membrane protein assembly factor BamEHAMAPMF_00925OM_assembly_BamEcoord: 1..108
score: 26.692253

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12160contigP-wetherbeei_contig12160:1004..1420 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12160.2.1mRNA_P-wetherbeei_contig12160.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig12160 1004..1435 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig12160.2.1 ID=prot_P-wetherbeei_contig12160.2.1|Name=mRNA_P-wetherbeei_contig12160.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=139bp
MLSACSYLPSMPSMPSISAIKPYRIDIQQGNFLSQETVSQLKKGMTREQV
RFVLGTPLVTDIFHPDRWDYVYYRELQDGKTDRRNISVFFEQDRLARVSG
DVTPAAQGQKDAPVPKPATSAPDAPKAPVPGAASAAKN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037873BamE-like
IPR007450Lipoprotein_SmpA/OmlA
IPR026592BamE