mRNA_P-wetherbeei_contig12160.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12160.1.1
Unique NamemRNA_P-wetherbeei_contig12160.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig12160.1.1 vs. uniprot
Match: A0A521XTW5_9PROT (4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521XTW5_9PROT)

HSP 1 Score: 359 bits (922), Expect = 8.300e-123
Identity = 192/265 (72.45%), Postives = 214/265 (80.75%), Query Frame = 1
Query:    1 MRIAIAGSSGRMGRTLIECVLKDPNLKLSGALEMPGHALIGRDAGEPSGVVTGVAVSADLAAVLAQSDAIIDFTRPAGTLAHLEACLKSGSKMVIGTTGFSDAEKARIAGAAKTIAIMFAPNMAVGVNVTFKLAEIAARSLGDDYDVEIIEAHHRHKVDAPSGTALKMGEVVAAALGRDPAKVFVHGREGDTGERDPKEIAFHAIRGGDIVGEHTVMFAGMGERVEVTVKSSSRSTYATGALRAAKFLKDKGNGLFDMQDVLGLR 795
            M+IAIAGS+GRMGR LIE VL   +LKLS ALE+ G   IG+DAGE  G   GVA+SAD A+ +A SD +IDFTRP G+L HL+AC+KSG+ MVIGTTGF    K RI  AA  IAI+FAPNMAVGVN  FK+AE+AA+ LGD YDVEIIEAHHRHKVDAPSGTALK+GEVVAAALGRD     V+GREGDTGERD K I FHAIRGGDIVGEHTVMFAG GERVEVTV+S SR TYA GALRAA FL  K +GL+DMQDVLGLR
Sbjct:    1 MKIAIAGSAGRMGRILIEAVLSGKDLKLSAALEVAGSPHIGKDAGEAFGSACGVAISADYASGIAASDCLIDFTRPEGSLLHLDACVKSGTNMVIGTTGFGAEGKQRIVAAANRIAIVFAPNMAVGVNAAFKMAEVAAKILGDAYDVEIIEAHHRHKVDAPSGTALKLGEVVAAALGRDLKSCAVYGREGDTGERDAKAIGFHAIRGGDIVGEHTVMFAGSGERVEVTVRSQSRMTYAAGALRAACFLGGKSSGLYDMQDVLGLR 265          
BLAST of mRNA_P-wetherbeei_contig12160.1.1 vs. uniprot
Match: A0A1F3XAR2_9PROT (4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Betaproteobacteria bacterium RBG_16_64_9 TaxID=1797478 RepID=A0A1F3XAR2_9PROT)

HSP 1 Score: 355 bits (911), Expect = 3.780e-121
Identity = 187/265 (70.57%), Postives = 222/265 (83.77%), Query Frame = 1
Query:    1 MRIAIAGSSGRMGRTLIECVLKDPNLKLSGALEMPGHALIGRDAGEPSGVVTGVAVSADLAAVLAQSDAIIDFTRPAGTLAHLEACLKSGSKMVIGTTGFSDAEKARIAGAAKTIAIMFAPNMAVGVNVTFKLAEIAARSLGDDYDVEIIEAHHRHKVDAPSGTALKMGEVVAAALGRDPAKVFVHGREGDTGERDPKEIAFHAIRGGDIVGEHTVMFAGMGERVEVTVKSSSRSTYATGALRAAKFLKDKGNGLFDMQDVLGLR 795
            MR+AIAG++GRMGRTLIE VL   +L+L+ ALE+ G+  +GRDAGE  G   GV V+ADLAA LA +D ++DFTRP GTLAHL+ CL SG++MVIGTTGFS  +K RIA A+K I I+FAPNMA+GVN  FKLAE+AAR LGD YDVEIIEAHHRHKVDAPSGTALK+GEVVA+ALGRD     + GR+G TGERD K IAFHA+RGGDIVGEHTVMFAG+GER+E+TV+S+SR TYA GALRA +FLKD+ +GL+DMQDVLGLR
Sbjct:    1 MRVAIAGATGRMGRTLIEAVLGAGDLELAVALEVEGNPFLGRDAGEAVGSPCGVLVTADLAA-LAAADCLVDFTRPEGTLAHLDRCLVSGTRMVIGTTGFSAEQKQRIAQASKRIGIVFAPNMAIGVNAGFKLAELAARILGDAYDVEIIEAHHRHKVDAPSGTALKLGEVVASALGRDLKTAAIFGRKGTTGERDAKSIAFHALRGGDIVGEHTVMFAGVGERLEITVRSTSRMTYALGALRACRFLKDRTSGLYDMQDVLGLR 264          
BLAST of mRNA_P-wetherbeei_contig12160.1.1 vs. uniprot
Match: A0A1F3ZZN2_9PROT (4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_64_12 TaxID=1797487 RepID=A0A1F3ZZN2_9PROT)

HSP 1 Score: 355 bits (911), Expect = 3.910e-121
Identity = 183/265 (69.06%), Postives = 214/265 (80.75%), Query Frame = 1
Query:    1 MRIAIAGSSGRMGRTLIECVLKDPNLKLSGALEMPGHALIGRDAGEPSGVVTGVAVSADLAAVLAQSDAIIDFTRPAGTLAHLEACLKSGSKMVIGTTGFSDAEKARIAGAAKTIAIMFAPNMAVGVNVTFKLAEIAARSLGDDYDVEIIEAHHRHKVDAPSGTALKMGEVVAAALGRDPAKVFVHGREGDTGERDPKEIAFHAIRGGDIVGEHTVMFAGMGERVEVTVKSSSRSTYATGALRAAKFLKDKGNGLFDMQDVLGLR 795
            MRIA+AG+ GRMGR LIE VL+  +L  + ALE+ GH  +G+DAGEP G   GV V+AD+ A   ++D +IDFT P GTLAHLEACL + +KMVIGTTGFS  +K RIA A+K I I+ APNMAVGVN  FKLAE+AAR LGDD+DVEI+EAHHRHKVDAPSGTAL++GE+VAA LGRD     VHGREG +GERD K I FHAIRGGDIVGEHTV+FAG GERVE+TV+S SR TYA GALRA +FLKDK +GL+DMQDVLGLR
Sbjct:    1 MRIAVAGAGGRMGRMLIEAVLQSKDLVFAAALEIAGHPALGKDAGEPVGSSCGVRVTADIGAAAREADCLIDFTSPEGTLAHLEACLIAHTKMVIGTTGFSAGQKQRIAEASKKIPIVLAPNMAVGVNAAFKLAELAARILGDDFDVEIVEAHHRHKVDAPSGTALRLGEIVAAVLGRDLKSCAVHGREGVSGERDSKSIGFHAIRGGDIVGEHTVLFAGTGERVEITVRSGSRMTYALGALRACRFLKDKKSGLYDMQDVLGLR 265          
BLAST of mRNA_P-wetherbeei_contig12160.1.1 vs. uniprot
Match: A0A1F4CCA5_9PROT (4-hydroxy-tetrahydrodipicolinate reductase n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4CCA5_9PROT)

HSP 1 Score: 355 bits (910), Expect = 5.550e-121
Identity = 188/265 (70.94%), Postives = 215/265 (81.13%), Query Frame = 1
Query:    1 MRIAIAGSSGRMGRTLIECVLKDPNLKLSGALEMPGHALIGRDAGEPSGVVTGVAVSADLAAVLAQSDAIIDFTRPAGTLAHLEACLKSGSKMVIGTTGFSDAEKARIAGAAKTIAIMFAPNMAVGVNVTFKLAEIAARSLGDDYDVEIIEAHHRHKVDAPSGTALKMGEVVAAALGRDPAKVFVHGREGDTGERDPKEIAFHAIRGGDIVGEHTVMFAGMGERVEVTVKSSSRSTYATGALRAAKFLKDKGNGLFDMQDVLGLR 795
            M+IAIAGS+GRMGR LIE VL   +LKL  ALE+     +G+DAGE  G   GVA+SAD AA +A SD +IDFTRP G+L HL+AC+K+G+ MVIGTTGFS   K RI  AA+ IAI+FAPNMAVGVN  FKLAEIAA+ LGD YDVEIIEAHHRHKVDAPSGTALK+GEVVAAALGRD     V+GREGDTGERD + I FH++RGGDIVGEHTV+FAG GERVEVTV+S SR TYA GALRAA+FL  K +GL+DMQDVLGLR
Sbjct:    1 MKIAIAGSTGRMGRILIEAVLASADLKLCAALEIAASPQLGKDAGEAMGSACGVALSADYAAGIAASDCLIDFTRPEGSLLHLDACVKAGTNMVIGTTGFSTEGKQRIRAAAQRIAIVFAPNMAVGVNAVFKLAEIAAKILGDAYDVEIIEAHHRHKVDAPSGTALKLGEVVAAALGRDLKSCAVYGREGDTGERDARSIGFHSVRGGDIVGEHTVVFAGSGERVEVTVRSQSRLTYAEGALRAARFLSGKRSGLYDMQDVLGLR 265          
BLAST of mRNA_P-wetherbeei_contig12160.1.1 vs. uniprot
Match: A0A536SFL2_9PROT (4-hydroxy-tetrahydrodipicolinate reductase n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536SFL2_9PROT)

HSP 1 Score: 347 bits (891), Expect = 4.300e-118
Identity = 180/265 (67.92%), Postives = 213/265 (80.38%), Query Frame = 1
Query:    1 MRIAIAGSSGRMGRTLIECVLKDPNLKLSGALEMPGHALIGRDAGEPSGVVTGVAVSADLAAVLAQSDAIIDFTRPAGTLAHLEACLKSGSKMVIGTTGFSDAEKARIAGAAKTIAIMFAPNMAVGVNVTFKLAEIAARSLGDDYDVEIIEAHHRHKVDAPSGTALKMGEVVAAALGRDPAKVFVHGREGDTGERDPKEIAFHAIRGGDIVGEHTVMFAGMGERVEVTVKSSSRSTYATGALRAAKFLKDKGNGLFDMQDVLGLR 795
            M++A+AG++GRMGRTLIE +L+  +LKL+ ALE PG   IGRDAGE  G   GV V +D A  +A +D +IDFTRP GTLAH+E C+K G +MVIGTTGFS  +  RIA AA  IAI+ APNM+ GVNV FKLAE AAR+LGD YDVEIIEAHHRHKVDAPSGTAL+ G+V+A +LGRD A+  VHGR+G  GERDPK I FHAIRGGDIVGEHTVMFAG GERVE+TV+S SR+TYA GALRAA+FL  K  GL+DMQ+V+GLR
Sbjct:    1 MKLAVAGAAGRMGRTLIEMILRSGDLKLAAALEAPGSPAIGRDAGELVGNPCGVKVVSDPANAVAGADCLIDFTRPEGTLAHVEQCVKKGVRMVIGTTGFSAQQNERIAEAAAKIAIVLAPNMSAGVNVAFKLAETAARALGDGYDVEIIEAHHRHKVDAPSGTALRFGDVIARSLGRDAARNSVHGRKGQVGERDPKAIGFHAIRGGDIVGEHTVMFAGEGERVEITVRSGSRATYALGALRAARFLSGKDRGLYDMQEVMGLR 265          
BLAST of mRNA_P-wetherbeei_contig12160.1.1 vs. uniprot
Match: A0A5C8NYG6_9BURK (4-hydroxy-tetrahydrodipicolinate reductase n=2 Tax=Burkholderiaceae TaxID=119060 RepID=A0A5C8NYG6_9BURK)

HSP 1 Score: 345 bits (886), Expect = 2.660e-117
Identity = 181/265 (68.30%), Postives = 213/265 (80.38%), Query Frame = 1
Query:    1 MRIAIAGSSGRMGRTLIECVLKDPNLKLSGALEMPGHALIGRDAGEPSGVVTGVAVSADLAAVLAQSDAIIDFTRPAGTLAHLEACLKSGSKMVIGTTGFSDAEKARIAGAAKTIAIMFAPNMAVGVNVTFKLAEIAARSLGDDYDVEIIEAHHRHKVDAPSGTALKMGEVVAAALGRDPAKVFVHGREGDTGERDPKEIAFHAIRGGDIVGEHTVMFAGMGERVEVTVKSSSRSTYATGALRAAKFLKDKGNGLFDMQDVLGLR 795
            MRIAIAG++GRMGR LI+ V    + +L GAL++PG+ L+GRDAGE SG  TGVA++ADL A LA++D +IDFTRP GTL HLEACL  G K VIGTTGF  A KA I  AAK  A++FAPNMAVGVN TFKL E+AA+ L   YD+EIIEAHHRHKVDAPSGTAL+MGEV+A ALGRD  +V V+GREG TGERDP  I F  +RGGDIVG+HTVMFAG+GER+E+T +SSSR TYA GALRA +FL  +G GL+DMQDVLGLR
Sbjct:    3 MRIAIAGATGRMGRMLIDTVCDADDAQLVGALDVPGNPLVGRDAGEFSGRATGVAITADLDAALAEADFLIDFTRPEGTLRHLEACLDHGVKAVIGTTGFDAAGKAAIDAAAKRTAVVFAPNMAVGVNATFKLLEVAAKILSSGYDIEIIEAHHRHKVDAPSGTALRMGEVLAQALGRDLKQVAVYGREGVTGERDPSTIGFATVRGGDIVGDHTVMFAGIGERIEITHRSSSRVTYAHGALRACRFLAGRGEGLYDMQDVLGLR 267          
BLAST of mRNA_P-wetherbeei_contig12160.1.1 vs. uniprot
Match: A0A2W4M1L2_9PROT (4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4M1L2_9PROT)

HSP 1 Score: 343 bits (881), Expect = 1.430e-116
Identity = 179/265 (67.55%), Postives = 210/265 (79.25%), Query Frame = 1
Query:    1 MRIAIAGSSGRMGRTLIECVLKDPNLKLSGALEMPGHALIGRDAGEPSGVVTGVAVSADLAAVLAQSDAIIDFTRPAGTLAHLEACLKSGSKMVIGTTGFSDAEKARIAGAAKTIAIMFAPNMAVGVNVTFKLAEIAARSLGDDYDVEIIEAHHRHKVDAPSGTALKMGEVVAAALGRDPAKVFVHGREGDTGERDPKEIAFHAIRGGDIVGEHTVMFAGMGERVEVTVKSSSRSTYATGALRAAKFLKDKGNGLFDMQDVLGLR 795
            M I IAG+ GRMGR LIE VLK  +L+L+GA ++PG   +GRDAGE  G  +GV +  D  A +A +D +IDFTRP GT+ HLEAC++ G   VIGTTGFS A++  I  AA  I ++FAPNMAVGVNV FKLAE+AAR LGD+YDVEIIEAHHRHKVDAPSGTAL++GE+VA ALGRD   V  HGREG TGERD K I FHA+RGGDIVGEHTV+FAG GERVEVTV+SSSR TYA GALRAA+FL+ K +GL+DM DVLGLR
Sbjct:    1 MNIVIAGAGGRMGRALIEAVLKSEDLRLAGAFDLPGSPALGRDAGEGLGRTSGVRIVDDYEAAIAAADCMIDFTRPEGTMRHLEACVRLGKAAVIGTTGFSSADRRAIETAAAKIPVVFAPNMAVGVNVVFKLAEVAARILGDEYDVEIIEAHHRHKVDAPSGTALRLGEIVAQALGRDLDAVARHGREGLTGERDRKTIGFHAVRGGDIVGEHTVLFAGEGERVEVTVRSSSRMTYAVGALRAARFLQGKKDGLYDMWDVLGLR 265          
BLAST of mRNA_P-wetherbeei_contig12160.1.1 vs. uniprot
Match: A0A1F4AMD9_9PROT (4-hydroxy-tetrahydrodipicolinate reductase n=3 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4AMD9_9PROT)

HSP 1 Score: 342 bits (877), Expect = 3.820e-116
Identity = 181/254 (71.26%), Postives = 210/254 (82.68%), Query Frame = 1
Query:   34 MGRTLIECVLKDPNLKLSGALEMPGHALIGRDAGEPSGVVTGVAVSADLAAVLAQSDAIIDFTRPAGTLAHLEACLKSGSKMVIGTTGFSDAEKARIAGAAKTIAIMFAPNMAVGVNVTFKLAEIAARSLGDDYDVEIIEAHHRHKVDAPSGTALKMGEVVAAALGRDPAKVFVHGREGDTGERDPKEIAFHAIRGGDIVGEHTVMFAGMGERVEVTVKSSSRSTYATGALRAAKFLKDKGNGLFDMQDVLGLR 795
            MGRTLIE +L  P+LKL+ ALE+ G A +G DAGE +G   GV V ADLAA LA +D +IDFTRP GTLAHL+ CL SG+ MVIGTTGF+  +K RIA AAK I I+FAPNMA+GVN  FKLA++AAR LGD YDVEIIEAHHRHKVDAPSGTALK+GEVVA+ALGRD     ++GREG TGERD K IAFHA+RGGDIVGEHTVMFAG+GERVE+TV+S SR TYA GALRA +FLK++ +GL+DMQDVLGLR
Sbjct:    1 MGRTLIEAILGAPDLKLAAALEVQGSAHLGHDAGEFAGAPCGVRVGADLAA-LADADCLIDFTRPEGTLAHLDRCLASGTGMVIGTTGFTAEQKQRIADAAKRIGIVFAPNMAIGVNAAFKLADLAARILGDAYDVEIIEAHHRHKVDAPSGTALKLGEVVASALGRDLKTSAIYGREGITGERDAKTIAFHALRGGDIVGEHTVMFAGVGERVEITVRSGSRMTYALGALRACRFLKERTSGLYDMQDVLGLR 253          
BLAST of mRNA_P-wetherbeei_contig12160.1.1 vs. uniprot
Match: A0A1D2SI15_9BURK (4-hydroxy-tetrahydrodipicolinate reductase n=3 Tax=Proteobacteria TaxID=1224 RepID=A0A1D2SI15_9BURK)

HSP 1 Score: 339 bits (869), Expect = 1.020e-114
Identity = 178/265 (67.17%), Postives = 212/265 (80.00%), Query Frame = 1
Query:    1 MRIAIAGSSGRMGRTLIECVLKDPNLKLSGALEMPGHALIGRDAGEPSGVVTGVAVSADLAAVLAQSDAIIDFTRPAGTLAHLEACLKSGSKMVIGTTGFSDAEKARIAGAAKTIAIMFAPNMAVGVNVTFKLAEIAARSLGDDYDVEIIEAHHRHKVDAPSGTALKMGEVVAAALGRDPAKVFVHGREGDTGERDPKEIAFHAIRGGDIVGEHTVMFAGMGERVEVTVKSSSRSTYATGALRAAKFLKDKGNGLFDMQDVLGLR 795
            MRIAIAG+SGRMGR LIE VL+ P+ +L+GAL++ G A IGRDAG+  G  TGVA++ D+ A +A +  +IDFTRP GTLAHL AC   G+ MVIGTTGF D  K  IA AA+ + I+FAPNM+VGVNVT KL E+AARSL   YD+EIIEAHHRHKVDAPSGTALKMGEVVA ALGRD  KV V+GREG TGERDP  I F  +RGGDIVG+HTV+FAG+GER+E+T +S+SR TYA GALRA +FL  + +GL+DMQDVLGLR
Sbjct:    2 MRIAIAGASGRMGRMLIEAVLEAPDAQLAGALDVAGSASIGRDAGDFLGRSTGVAITDDIDAGIADAQFLIDFTRPEGTLAHLRACAARGAAMVIGTTGFDDEGKRAIAAAAERVPIVFAPNMSVGVNVTLKLLELAARSLATGYDIEIIEAHHRHKVDAPSGTALKMGEVVATALGRDLRKVAVYGREGVTGERDPSTIGFATVRGGDIVGDHTVLFAGIGERIEITHRSASRVTYAHGALRACRFLAGRADGLYDMQDVLGLR 266          
BLAST of mRNA_P-wetherbeei_contig12160.1.1 vs. uniprot
Match: A0A6S7B408_9BURK (4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Pararobbsia alpina TaxID=621374 RepID=A0A6S7B408_9BURK)

HSP 1 Score: 337 bits (864), Expect = 5.480e-114
Identity = 172/265 (64.91%), Postives = 214/265 (80.75%), Query Frame = 1
Query:    1 MRIAIAGSSGRMGRTLIECVLKDPNLKLSGALEMPGHALIGRDAGEPSGVVTGVAVSADLAAVLAQSDAIIDFTRPAGTLAHLEACLKSGSKMVIGTTGFSDAEKARIAGAAKTIAIMFAPNMAVGVNVTFKLAEIAARSLGDDYDVEIIEAHHRHKVDAPSGTALKMGEVVAAALGRDPAKVFVHGREGDTGERDPKEIAFHAIRGGDIVGEHTVMFAGMGERVEVTVKSSSRSTYATGALRAAKFLKDKGNGLFDMQDVLGLR 795
            M+IAIAG+SGRMGR L+E VL DP+ +LSGAL+  G   +G+DAG   G  TGVA++ D+ AVL+QS+ +IDFTRP GTLAHL    + G KM++GTTGF +A+KA +A AA+++AI+FAPNM+VGVNVTFKL ++AA+ L   YD+EIIEAHHRHK+DAPSGTAL+MGEV+A ALGRD +KV V+GREG TG RDP  I F  +RGGDIVG+HT +FAG GER+E++ KSSSR +YA GAL AA+FL DK  GLFDMQDVLGLR
Sbjct:    1 MKIAIAGASGRMGRMLVEAVLADPDARLSGALDRAGSPALGQDAGLFLGSNTGVAITDDIEAVLSQSEYLIDFTRPEGTLAHLAVARRHGVKMIVGTTGFGEAQKAELAAAAQSLAIVFAPNMSVGVNVTFKLLDLAAQYLSTGYDIEIIEAHHRHKIDAPSGTALRMGEVIAKALGRDLSKVAVYGREGVTGARDPSTIGFATVRGGDIVGDHTALFAGDGERIEISHKSSSRKSYANGALVAARFLADKSQGLFDMQDVLGLR 265          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12160.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A521XTW5_9PROT8.300e-12372.454-hydroxy-tetrahydrodipicolinate reductase n=1 Tax... [more]
A0A1F3XAR2_9PROT3.780e-12170.574-hydroxy-tetrahydrodipicolinate reductase n=1 Tax... [more]
A0A1F3ZZN2_9PROT3.910e-12169.064-hydroxy-tetrahydrodipicolinate reductase n=1 Tax... [more]
A0A1F4CCA5_9PROT5.550e-12170.944-hydroxy-tetrahydrodipicolinate reductase n=2 Tax... [more]
A0A536SFL2_9PROT4.300e-11867.924-hydroxy-tetrahydrodipicolinate reductase n=2 Tax... [more]
A0A5C8NYG6_9BURK2.660e-11768.304-hydroxy-tetrahydrodipicolinate reductase n=2 Tax... [more]
A0A2W4M1L2_9PROT1.430e-11667.554-hydroxy-tetrahydrodipicolinate reductase n=1 Tax... [more]
A0A1F4AMD9_9PROT3.820e-11671.264-hydroxy-tetrahydrodipicolinate reductase n=3 Tax... [more]
A0A1D2SI15_9BURK1.020e-11467.174-hydroxy-tetrahydrodipicolinate reductase n=3 Tax... [more]
A0A6S7B408_9BURK5.480e-11464.914-hydroxy-tetrahydrodipicolinate reductase n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12160contigP-wetherbeei_contig12160:196..993 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1562701.BBOF01000067_gene2079
Preferred namedapB
PFAMsDapB_C,DapB_N
Model size798
Max annot lvl28216|Betaproteobacteria
KEGG rclassRC00478
KEGG koko:K00215
KEGG ReactionR04198,R04199
KEGG Pathwayko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230
KEGG ModuleM00016,M00525,M00526,M00527
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.64e-113
EggNOG OGsCOG0289@1|root,COG0289@2|Bacteria,1MUCT@1224|Proteobacteria,2VJC3@28216|Betaproteobacteria,1K3CP@119060|Burkholderiaceae
EC1.17.1.8
DescriptionCatalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
Cds size798
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185939.4828491-CDS-P-wetherbeei_contig12160:195..9931683185939.4828491-CDS-P-wetherbeei_contig12160:195..993Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12160 196..993 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12160.1.1prot_P-wetherbeei_contig12160.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12160 196..993 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12160.1.1

>prot_P-wetherbeei_contig12160.1.1 ID=prot_P-wetherbeei_contig12160.1.1|Name=mRNA_P-wetherbeei_contig12160.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=266bp
MRIAIAGSSGRMGRTLIECVLKDPNLKLSGALEMPGHALIGRDAGEPSGV
VTGVAVSADLAAVLAQSDAIIDFTRPAGTLAHLEACLKSGSKMVIGTTGF
SDAEKARIAGAAKTIAIMFAPNMAVGVNVTFKLAEIAARSLGDDYDVEII
EAHHRHKVDAPSGTALKMGEVVAAALGRDPAKVFVHGREGDTGERDPKEI
AFHAIRGGDIVGEHTVMFAGMGERVEVTVKSSSRSTYATGALRAAKFLKD
KGNGLFDMQDVLGLR*
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mRNA from alignment at P-wetherbeei_contig12160:196..993-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12160.1.1 ID=mRNA_P-wetherbeei_contig12160.1.1|Name=mRNA_P-wetherbeei_contig12160.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=798bp|location=Sequence derived from alignment at P-wetherbeei_contig12160:196..993- (Phaeothamnion wetherbeei SAG_119_79)
ATGCGGATCGCGATCGCAGGCAGTTCCGGGCGCATGGGGCGCACGCTGAT CGAGTGCGTCCTGAAGGACCCGAATCTGAAGCTTTCAGGGGCGCTGGAGA TGCCGGGCCATGCGCTGATCGGGCGCGATGCGGGAGAACCCTCGGGTGTG GTGACGGGGGTGGCTGTCAGTGCCGACCTCGCCGCAGTGCTCGCGCAGTC CGATGCGATCATCGATTTCACGCGGCCGGCCGGCACGCTCGCGCACCTGG AGGCCTGCCTGAAGTCGGGGTCGAAGATGGTGATCGGCACCACCGGCTTC TCGGACGCGGAGAAAGCGCGCATTGCCGGGGCTGCGAAGACGATCGCGAT CATGTTCGCGCCCAACATGGCGGTCGGGGTCAACGTGACCTTCAAGCTCG CGGAGATCGCCGCACGCAGCCTCGGCGACGATTACGACGTGGAGATCATC GAGGCGCACCACCGCCACAAGGTCGATGCGCCCTCGGGGACGGCCCTGAA GATGGGCGAGGTGGTGGCCGCGGCGCTCGGGCGCGACCCGGCCAAGGTGT TCGTGCATGGCCGCGAAGGCGATACCGGGGAGCGGGACCCGAAGGAAATC GCCTTCCACGCGATCCGCGGCGGGGACATCGTCGGCGAGCACACTGTGAT GTTCGCGGGCATGGGCGAGCGGGTCGAGGTGACGGTCAAGTCCTCGAGCC GTTCGACCTACGCGACTGGTGCACTGCGGGCTGCCAAGTTCCTGAAAGAC AAGGGAAACGGGCTCTTCGACATGCAGGACGTGCTGGGCCTGCGCTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig12160:196..993-

>mRNA_P-wetherbeei_contig12160.1.1 ID=mRNA_P-wetherbeei_contig12160.1.1|Name=mRNA_P-wetherbeei_contig12160.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=798bp|location=Sequence derived from alignment at P-wetherbeei_contig12160:196..993- (Phaeothamnion wetherbeei SAG_119_79)
ATGCGGATCGCGATCGCAGGCAGTTCCGGGCGCATGGGGCGCACGCTGAT
CGAGTGCGTCCTGAAGGACCCGAATCTGAAGCTTTCAGGGGCGCTGGAGA
TGCCGGGCCATGCGCTGATCGGGCGCGATGCGGGAGAACCCTCGGGTGTG
GTGACGGGGGTGGCTGTCAGTGCCGACCTCGCCGCAGTGCTCGCGCAGTC
CGATGCGATCATCGATTTCACGCGGCCGGCCGGCACGCTCGCGCACCTGG
AGGCCTGCCTGAAGTCGGGGTCGAAGATGGTGATCGGCACCACCGGCTTC
TCGGACGCGGAGAAAGCGCGCATTGCCGGGGCTGCGAAGACGATCGCGAT
CATGTTCGCGCCCAACATGGCGGTCGGGGTCAACGTGACCTTCAAGCTCG
CGGAGATCGCCGCACGCAGCCTCGGCGACGATTACGACGTGGAGATCATC
GAGGCGCACCACCGCCACAAGGTCGATGCGCCCTCGGGGACGGCCCTGAA
GATGGGCGAGGTGGTGGCCGCGGCGCTCGGGCGCGACCCGGCCAAGGTGT
TCGTGCATGGCCGCGAAGGCGATACCGGGGAGCGGGACCCGAAGGAAATC
GCCTTCCACGCGATCCGCGGCGGGGACATCGTCGGCGAGCACACTGTGAT
GTTCGCGGGCATGGGCGAGCGGGTCGAGGTGACGGTCAAGTCCTCGAGCC
GTTCGACCTACGCGACTGGTGCACTGCGGGCTGCCAAGTTCCTGAAAGAC
AAGGGAAACGGGCTCTTCGACATGCAGGACGTGCTGGGCCTGCGCTAG
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