prot_P-wetherbeei_contig1214.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1214.3.1
Unique Nameprot_P-wetherbeei_contig1214.3.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length475
Homology
BLAST of mRNA_P-wetherbeei_contig1214.3.1 vs. uniprot
Match: D7FGR9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGR9_ECTSI)

HSP 1 Score: 225 bits (574), Expect = 8.230e-65
Identity = 153/417 (36.69%), Postives = 203/417 (48.68%), Query Frame = 0
Query:   57 PLLVSFRGRPVPSDGSEIRFKLHE--HTKNEGKRILTGKTDRLEFWAKNTGVG---RDLANFCVGVLDDVTGEMTLHEVGHVYGLQQKVRGVDDVVEDRATAMEDLAYKERRGILIDAFGSKKSKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMIDAGAEAEEAGRRRLLPPYHADAGTPAGVYLVEEMVRREDLAALGREADRLATAHPQGEGHWLRSWVQNRSRAAAGDKNKKKFSRHALSRLWTDAGAPPRERMLPLLHLNCMVAFHQASSFSKTTPAAVAKELSIPEVVARGLLAGFTLCGDDAGDGGGGGRRTFARDKFTRERLCVHALCLALVLEGCTLDFGALAADLALTPAAAAALLRQLGCAVTTGMPPKARLTVPLAFPRRRGA 468
            P+LVSF  + VP D S + F++HE    + EG++I+ G   R+++W  N G G    DL  F VGV D  TGE+ LHE GH Y L+Q V   DD +ED   AME L YK+R+  L++ FGSKK KA                                                 A+    A  EEA RRR LP    +A TP GVY   ++   ++L ++ RE DR A     G   W + + +    +         F    L+ L        + RML LL+L  M  FH AS+  K TPA ++ +L IPE+V R LL  F++C       G GG   + R K  + +L VHALCLALVLEGC L+ G LA D  L+ A A ++LR+LGC  T      A L +PL FPR R A
Sbjct:   59 PILVSFANQTVPGDMSAVEFRMHEADDEEREGQKIVMGDGGRMDYWGLNFGPGAESNDLCRFLVGVEDGATGELILHEAGHAYSLRQSVGDKDDNIED--FAMEGLEYKQRKDALVNQFGSKKKKAAIRSRDANVIQAGSVVGGSAMSRVLGRALKEEEGGGAGGVDGDPTATDGAL----AAVEEA-RRRFLPKMRTEASTPEGVYSAGDIAGVQELESMEREIDRAAEQIEGGMHQWAKDFAERPRESCP------HFVGKRLTLLLDLGERNQKRRMLELLYLRHMCVFHHASALLKGTPAQLSAKLDIPEIVLRRLLEKFSVCEKK----GAGGTANYVRTKTLKNQLVVHALCLALVLEGCRLEIGVLAEDFRLSTAEARSMLRELGCTATNT---SAHLKLPLTFPRSRKA 455          
BLAST of mRNA_P-wetherbeei_contig1214.3.1 vs. uniprot
Match: A0A507DSJ5_9FUNG (Uncharacterized protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DSJ5_9FUNG)

HSP 1 Score: 65.9 bits (159), Expect = 6.050e-8
Identity = 100/437 (22.88%), Postives = 163/437 (37.30%), Query Frame = 0
Query:   51 DAAVGPPLLVSFRGRPVPSDGSEIRFKLHEHTKNEG--------KRILTGKTDRLEFWAKNTGVGRDLANFCVGVLDDVTGEMTLHEVGHVYGLQQKVRGVDDVVEDRATAMEDLAYKERRGILIDAFGSKKSKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMIDAGAEAEEAGRR-RLLPPYHADAGTPAGVYLVEEMVRREDLAALG-------READRLATAHPQGEGHWLRSWVQNRSRAAAGDKNKKKFSRHALSRLWTDAGAPPRERMLPLLHLNCMVAFHQASSFSKTTPAAVAKELSIPEVVARGLLAGFTLCGDDAGDGGGGGRRTFARDKFTRERLCVHALCLALVLEGCTLDFGALAADLALTPAAAAALLRQLGCAVTTGMPP------KARLTVPLAFPRR 465
            D +   PLLVSF     PS    ++F+     + EG        +RI+ G+  +LE+   NT   +    + VG+ D  T ++TL E   ++ L   V+ +             +A    R  L +AFG+KK +                                                  A +   AE +E  +  R +PPY+A A TPA VY  E+++   ++AA+        R A+ + T   Q     L SWV  +               HA  R   D       +   LL+L  ++ F+        +     +    P++VA  L+  FT   +D G      R+ F      +++L  + L +AL +    LD   +++D+ +       + R+LGC V +          K  L VPL FP R
Sbjct:   22 DTSADTPLLVSFPD--FPSKPHSVKFQTFTKRQAEGASTSARKKRRIVVGQNSKLEYVGSNTD-SKSYCRYVVGIFDKNTKKLTLRET-ELFHLTTAVKTLKRHESKHIGEKNMIA----RNALGEAFGTKKRRQAIRALEKNQVDVGGLNEVADVIKGAIDEKA-------------------AALPTRAEIQEEQKLDRGIPPYNAQAQTPAEVYAREDLISDAEMAAIQFKKLWKIRGAEDVKT---QLAPMSLTSWVWGKI--------------HACLRSKDDVS-----QFKTLLYLGYLMKFYTLKDRDLNSGKVAERLGGAPQIVADTLMDRFTEFQEDDG------RKKFRMAPKLKDKLLAYILAIALTVNEYRLDINHMSSDMNIGVTKMTKVARELGCRVDSKRDEDGPQRKKVVLVVPLTFPTR 403          
BLAST of mRNA_P-wetherbeei_contig1214.3.1 vs. uniprot
Match: A0A2R5FZC8_9STRA (DNA-directed RNA polymerase I subunit RPA49 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5FZC8_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 1.340e-7
Identity = 73/257 (28.40%), Postives = 114/257 (44.36%), Query Frame = 0
Query:  232 GAEAEEAGRRRLLPPYHADAGTPAGVYLVEEMVRREDLAALGREADRLATAHPQGE-----------GHWLRSWVQNRSRAAAGDKNKKKFSRHALSRLWTDAGAPPRERMLPLLHLNCMVAFHQASSFSKTTPAAVAKELSIPEVVARGLLAGFTLCGDDAGDGGGGGRRTFARDKFTRERLCVHALCLALVLEGCTLDFGA---LAADLALTPAAAAALLRQLGCAVTT----GMPP--KAR---LTVPLAFPRR 465
            G +A+ A R+ LLPP+HA+A  P  V+L+++MV + +L AL +  + L  A  +             G ++RS ++   R +AG  NKK     A + L+        + ++    L+ ++              A       P  V+  +L+ F       G        +  R K  ++RL +H L LAL+L GC +D+     LA DL+ TP+       QLG    T     +P   KAR   L VPL FPR+
Sbjct:  490 GEDADAASRKHLLPPFHAEAERPEQVFLLQDMVSKNELRALKKPVEELVKAAQRAGSSAEFAAQDRFGTFVRSHLE---RISAGGMNKKAQKAVACAALYM-------QYLINFSKLHRIIRPRLQQKLGSVLGGA-------PYEVSGAILSTFAEPEIATG--------SMNRTKLHQDRLSLHILALALILCGCVIDYRRVKMLAEDLSQTPSWVFEYAAQLGTRTKTDSSASLPDGKKARKIVLEVPLRFPRK 721          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1214.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FGR9_ECTSI8.230e-6536.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A507DSJ5_9FUNG6.050e-822.88Uncharacterized protein n=1 Tax=Powellomyces hirtu... [more]
A0A2R5FZC8_9STRA1.340e-728.40DNA-directed RNA polymerase I subunit RPA49 n=1 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009668RNA polymerase I associated factor, A49-likePFAMPF06870RNA_pol_I_A49coord: 72..463
e-value: 2.6E-50
score: 171.4
IPR009668RNA polymerase I associated factor, A49-likePANTHERPTHR14440DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA49coord: 42..469
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 209..228
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1214contigP-wetherbeei_contig1214:1711..4245 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1214.3.1mRNA_P-wetherbeei_contig1214.3.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1214 1681..4325 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1214.3.1 ID=prot_P-wetherbeei_contig1214.3.1|Name=mRNA_P-wetherbeei_contig1214.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=475bp
MELEGPTSASPTPAPQDAAPKHPAGDGGGEKRSSKKRARSTVRVRVPPPG
DAAVGPPLLVSFRGRPVPSDGSEIRFKLHEHTKNEGKRILTGKTDRLEFW
AKNTGVGRDLANFCVGVLDDVTGEMTLHEVGHVYGLQQKVRGVDDVVEDR
ATAMEDLAYKERRGILIDAFGSKKSKAAAAVAASNIIDAEHVVGGAAALG
TVLSSSGDGGGASSGGTPSGTGAAASAMIDAGAEAEEAGRRRLLPPYHAD
AGTPAGVYLVEEMVRREDLAALGREADRLATAHPQGEGHWLRSWVQNRSR
AAAGDKNKKKFSRHALSRLWTDAGAPPRERMLPLLHLNCMVAFHQASSFS
KTTPAAVAKELSIPEVVARGLLAGFTLCGDDAGDGGGGGRRTFARDKFTR
ERLCVHALCLALVLEGCTLDFGALAADLALTPAAAAALLRQLGCAVTTGM
PPKARLTVPLAFPRRRGAGGDARK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009668RNA_pol-assoc_fac_A49-like