prot_P-wetherbeei_contig12135.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig12135.1.1
Unique Nameprot_P-wetherbeei_contig12135.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length671
Homology
BLAST of mRNA_P-wetherbeei_contig12135.1.1 vs. uniprot
Match: A0A438BTG2_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438BTG2_VITVI)

HSP 1 Score: 368 bits (944), Expect = 1.840e-116
Identity = 199/524 (37.98%), Postives = 323/524 (61.64%), Query Frame = 0
Query:  146 IASDLDPATYEEAMRSSDAVQWRKALESEYLSLQEHGTFEICELPAERKALGCRWVLKKKRNTDGSVARFKARLVAQGFNQQEGVDYVPEELSAPVASMDEVRTALAVGTYFDWEIEQMDIDTAYLNAPVSEEIYMRPPKGFEVSGPDGKPMVWRLRRSLYGLRQSAFNWNYTISNFFKELGFAANPTSPCVFTRRLNTG-IVIIILYVDDLLLIGDKKTELDQLKLDIGQRFKAKDLGSVHHLLGMRVTRNRSEGTLKIDQERYICDMLKRFNMDSCNASYLPADTHTTLTKDGIVSTLSRGTEPTAEKTAVRPYQSLVGSLMYAAYVTRLDVANAVRVLARFMQGPTEQHWLAAKRVLRYLAGTRGLGIEFRRGNGGPLRLVGYCDANLAGDLDNGRSTTGVIFMAAGGVVSYASRLQKSVARSTMEAEYMALFEAGQTAVLLRNLLEKLGAAQLEATPLHEDNEACMLMANSAGHTRRSRHIAIRYHYTRELIEDNVIQLVSTATHGQLADGLTKNLPRER 668
            I+   +P TY+E ++  +  +W KA++ E  SL E+ T+++ + P  +K L  +WV ++K + + S  RFKARLV +GF+Q++GVD+  +E+ +PV  M  +RT L +    + E+EQ+D+ TA+L+  + EEIYM  P+GF   G D   +V +L++SLYGL+Q+   W     +F  E G++   +  CVF ++   G  +I++LYVDD+L++G   +++ +LK ++ + F  KDLG    +LG+R+ RNRS G + + QE Y+  +L+RFNMD       P   H  L+     S      E   E   + PY S +GSLMYA   TR D+A+AV V++RF+  P ++HW A K +LRYL GT  + + F  G G P+ L G+ D+++AGD+D+ +ST+G +   AGG V++ SRLQK VA ST EAE++A+ EA +  + L+  L++LG  Q E   LH D+++ + ++ ++    RS+HI +RYH+ R+++ D ++QL    T    +D LTK L +++
Sbjct:    2 ISDQGEPETYQEVLKHENKTEWLKAMKEEMKSLHENHTYDLVKPPKGKKILKNKWVFRRKNDGNSSQPRFKARLVVKGFDQRKGVDF--DEIFSPVVKMSSIRTVLGIAASMNLEVEQLDVKTAFLHGDLEEEIYMEQPEGFIDKGND--QLVCKLKKSLYGLKQAPRQWYRKFDSFMTEHGYSRTTSDHCVFVKKYTDGNFIILLLYVDDMLIVGQDMSKISKLKSELSKSFAMKDLGPAKQILGIRIVRNRSHGLIWLSQENYVKKVLERFNMDKAKPVNCPLAGHFKLSS----SQCPTSDEEKNEMQKI-PYASAIGSLMYAMVCTRPDIAHAVGVVSRFISNPGKEHWAAVKWILRYLQGTSKMSLCF--GKGEPI-LDGFTDSDMAGDVDSRKSTSGYLITFAGGAVTWQSRLQKCVALSTTEAEFIAITEACKELLWLKKFLQELGLKQ-ERYVLHCDSQSAIHLSKNSSFHSRSKHIDVRYHWIRDVLNDKLLQLEKVHTDDNTSDMLTKALTKDK 512          
BLAST of mRNA_P-wetherbeei_contig12135.1.1 vs. uniprot
Match: A0A6G0HFF8_LARCR (Copia protein Gag-int-pol protein Copia VLP protein Copia protease n=1 Tax=Larimichthys crocea TaxID=215358 RepID=A0A6G0HFF8_LARCR)

HSP 1 Score: 365 bits (936), Expect = 1.660e-115
Identity = 207/516 (40.12%), Postives = 318/516 (61.63%), Query Frame = 0
Query:  156 EEAMRSSDAVQWRKALESEYLSLQEHGTFEICELPAERKALGCRWVLKKKRNTDGSVARFKARLVAQGFNQQEGVDYVPEELSAPVASMDEVRTALAVGTYFDWEIEQMDIDTAYLNAPVSEEIYMRPPKGFEVSGPDGKPMVWRLRRSLYGLRQSAFNWNYTISNFFKELGFAANPTSPCVFTRRLNTGIVIIILYVDDLLLIGDKKTELDQLKLDIGQRFKAKDLGSVHHLLGMRVTRNRSEGTLKIDQERYICDMLKRFNMDSCNASYLPADTHTTLTKD-GIVSTLSRGTEPTAEKTAVRPYQSLVGSLMYAAYVTRLDVANAVRVLARFMQGPTEQHWLAAKRVLRYLAGTRGLGIEFRRGNGGPLRLVGYCDANLAGDLDNGRSTTGVIFMAAGGVVSYASRLQKSVARSTMEAEYMALFEAGQTAVLLRNLLEKLGAAQLEATP--LHEDNEACMLMANSAGHTRRSRHIAIRYHYTRELIEDNVIQLVSTATHGQLADGLTKNLPRER 668
            +EAM SS+A +W++A + EY SL E+ T+++ ELP +RK +G RWV K K ++DG V R+K RLVA+G++Q  GVDY  +E  +PV     +RT L+     +  + QMD+ TA+LN  + EEIYM  P G+   G +   +V +L++S+YGL+QS   W+ T +   K++GF  + + PCVF R     + I+ +YVDDL+LI +    + +LK+ + +++K KD+G + ++LG+ V ++++  ++ + Q+ YI  +L+++ MD  N    PAD +  L KD G+ + ++ GT           YQS+VGSL+YAA  TR D+A AV  +++F   P   H  A KR+LRYL GT  L ++++R       L+G+ DA+ AGD D+ RSTTG IF+  GG VS+ S+ Q +VA ST EAEY+AL +A Q    L  LL  LG   ++ATP  + EDN+  + +A +     R++HI IRYHY RE +++  IQL    T    AD LTK L +++
Sbjct:    2 KEAMLSSNAKEWKEAADLEYESLLENETWDLVELPKDRKPIGSRWVFKVKHHSDGEVERYKCRLVAKGYSQNYGVDY--DETFSPVVRFSSIRTLLSFAVQNNLHVHQMDVVTAFLNGHLEEEIYMEQPDGYIKPGQEH--LVCKLKKSIYGLKQSPRCWSKTFTESMKDIGFNQSTSDPCVFVRARQE-LEILAVYVDDLILITESLESMTELKVALKKKYKMKDMGELSYILGISVIQDKTNNSVYLHQKHYIEAVLQKYGMDKANPVTTPADANVKLQKDDGVSNPVNPGT-----------YQSIVGSLLYAAMATRPDIAQAVSAVSKFNAKPNTAHMTAVKRILRYLKGTINLALKYQRSES--ETLLGFSDADWAGDQDDRRSTTGNIFLLGGGAVSWLSKKQNTVALSTAEAEYVALSQAAQECTWLTRLLSDLG---MDATPTVILEDNQGAIAIAKNPVDHSRTKHIDIRYHYIRECVQNGQIQLQYCPTEDMKADILTKPLAKQK 496          
BLAST of mRNA_P-wetherbeei_contig12135.1.1 vs. uniprot
Match: W7TJ26_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJ26_9STRA)

HSP 1 Score: 370 bits (951), Expect = 3.350e-115
Identity = 217/540 (40.19%), Postives = 321/540 (59.44%), Query Frame = 0
Query:  137 TYAAGMAAAIASDLDPATYEEAMRSSDA-VQWRKALESEYLSLQEHGTFEICELPAERKALGCRWVLKKKRNTDGSVARFKARLVAQGFNQQEGVDYVPEELSAPVASMDEVRTALAVGTYFDWEIEQMDIDTAYLNAPVSEEIYMRPPKGFEVSGPDGKPMVWRLRRSLYGLRQSAFNWNYTISNFFKELGFAANPTSPCVFTRRLNTG-IVIIILYVDDLLLIGDKKTELDQLKLDIGQRFKAKDLGSVHHLLGMRVTRNRSEGTLKIDQERYICDMLKRFNMDSCNASYLPADTHTTLTK-DGIVSTLSRGTEPTAEKTAVRPYQSLVGSLMYAAYVTRLDVANAVRVLARFMQGPTEQHWLAAKRVLRYLAGTRGLGIEFRRGNGGPLRLVGYCDANLAGDLDNGRSTTGVIFMAAGG----VVSYASRLQKSVARSTMEAEYMALFEAGQTAVLLRNLLEKLGAAQLEATPLHEDNEACMLMANSAGHTRRSRHIAIRYHYTRELIEDNVIQLVSTATHGQLADGLTKNLPRERL 669
            T    +A A AS++    Y      S+   + +KA ++EY +  ++GT+E+  LP   + +   WV   KR+  G + R KAR +A+G++Q+ G DY+     APVASM  +R  LA+    D E++ MD+DTAYL + + E++Y++ P G+E  GP+G  +V RLR+SLYGL+QS  NW+  I  +F+  G   +   PC++ +  ++G I++I+LYVDDL++  + +T  D+ K DI + F  KDL  +  +LGM + RNR   T++I Q  YI  ML +F M  C +   P +   TLTK DG      +  +P  E      Y  LVGSL+YAA VTR D+A AV+ L + +QG  ++HW+AAKRVLRYL GTR +G+++   + G   LVGY DA+ AGD DN RST+G  F  + G     + + ++ Q  VA S+ E+E ++   A Q AV +R LL  LG  Q E T + EDN+AC+ M N+    +R++HI +RYH+ RE +E   ++LV   T  QLAD LTK L   RL
Sbjct:  178 TMGGSLAFAAASEIVNEDYHLTEDESEVRAERKKAKDAEYQAHMKNGTWELTPLPKGERCISSGWVETDKRDQKGVIVRRKARFIAKGYSQEFGYDYL--HTYAPVASMTTIRLVLALACILDLELDNMDVDTAYLQSDLEEKVYIKQPPGYEKYGPNGGELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGLHPSYADPCLYVKFASSGEILVIVLYVDDLIIGSNSRTMTDKFKQDISREFSMKDLKELDWILGMGIKRNRENRTMEISQTGYIGMMLNKFGMADCKSVLTPMEG--TLTKMDG------KDVKPDNE------YMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNKEHWIAAKRVLRYLKGTRDVGLKYTGNSTGSFTLVGYADADYAGDKDNRRSTSGYTFTLSHGDDVNTIDWKAKQQDVVALSSAESELISACSATQNAVYIRQLLMDLGFKQDEPTVIMEDNQACIAMGNNPITHKRTKHIDVRYHFVREKVESKEVELVYIPTQHQLADILTKPLSSIRL 701          
BLAST of mRNA_P-wetherbeei_contig12135.1.1 vs. uniprot
Match: UPI001161C466 (Ty1/Copia family RNAse HI domain-containing protein n=1 Tax=Escherichia coli TaxID=562 RepID=UPI001161C466)

HSP 1 Score: 364 bits (934), Expect = 2.240e-114
Identity = 199/519 (38.34%), Postives = 312/519 (60.12%), Query Frame = 0
Query:  151 DPATYEEAMRSSDAVQWRKALESEYLSLQEHGTFEICELPAERKALGCRWVLKKKRNTDGSVARFKARLVAQGFNQQEGVDYVPEELSAPVASMDEVRTALAVGTYFDWEIEQMDIDTAYLNAPVSEEIYMRPPKGFEVSGPDGKPMVWRLRRSLYGLRQSAFNWNYTISNFFKELGFAANPTSPCVFTRRLNTGIVIIILYVDDLLLIGDKKTELDQLKLDIGQRFKAKDLGSVHHLLGMRVTRNRSEGTLKIDQERYICDMLKRFNMDSCNASYLPADTHTTLTKDGIVSTLSRGTEPTAEKTAVRPYQSLVGSLMYAAYVTRLDVANAVRVLARFMQGPTEQHWLAAKRVLRYLAGTRGLGIEFRRGNGGPLRLVGYCDANLAGDLDNGRSTTGVIFMAAGGVVSYASRLQKSVARSTMEAEYMALFEAGQTAVLLRNLLEKLGAAQLEATPLHEDNEACMLMANSAGHTRRSRHIAIRYHYTRELIEDNVIQLVSTATHGQLADGLTKNLPRERL 669
            DP TY EA+   D+ +W +A++SE  S+  +  + + + P     +GC+W+ K+K   DG+V  FKARLVA+G++Q+EG+DY  ++  +PVA +  +RT LAV  YFD+EI QMD+ TA+LN  + E+IYM  P GF  S  D K  V +L+RS+YGL+Q++ +WN   ++  K+ GF  N   PCVF R   + +V ++LYVDD+LLIG+    L  +K+ + + F  KDLG    +LG++V R+R    L + Q+ YI ++LKRF+M++     +P      L+K    ST         E+ +  PY S +GSLMYA   TR D+A+AV V +R+   P E+HW + K +L+YL  T+ + + F  GNG  L++ GY D++   D+D+ +ST+G +F+  GG VS+ S  Q  +A STMEAEY+A  EA + A   +    ++G    +A PL+ DN   + +A      ++S+HI  RYH  R+ +E   +++    +   +AD LTK L ++++
Sbjct:   51 DPKTYNEAISDIDSEKWLEAMKSEIDSMHSNQVWTLVDPPEGIVPIGCKWIFKRKIGADGNVETFKARLVAKGYSQREGIDY--QDTFSPVAMLKSIRTLLAVAAYFDYEIWQMDVKTAFLNGYLEEDIYMEQPLGFTSSDTDHK--VCKLQRSIYGLKQASRSWNTRFNDVIKKFGFIKNEEEPCVFKRVSGSAVVFLVLYVDDILLIGNDIPMLTSVKMWLSKEFSMKDLGEASFILGIKVYRDRPNRMLGLSQKMYIEEVLKRFSMENSKRGLIPFRHGIHLSKKMCPSTPEE-----IERMSKIPYASAIGSLMYAMLCTRPDIAHAVSVTSRYQSNPGEEHWTSVKCILKYLRRTKDMMLVF--GNG-ELQVQGYTDSDFMSDIDDRKSTSGSLFVCNGGAVSWKSSKQTVIADSTMEAEYIAASEAAKEAFWYKKFAAEIGVMPSDAIPLYCDNNGAIALAKEPRSHQKSKHIERRYHLIRDYLEKGYVEVKRVNSTDNVADPLTKPLGQQKI 557          
BLAST of mRNA_P-wetherbeei_contig12135.1.1 vs. uniprot
Match: A0A2N9HZ30_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HZ30_FAGSY)

HSP 1 Score: 375 bits (963), Expect = 3.310e-114
Identity = 207/519 (39.88%), Postives = 309/519 (59.54%), Query Frame = 0
Query:  151 DPATYEEAMRSSDAVQWRKALESEYLSLQEHGTFEICELPAERKALGCRWVLKKKRNTDGSVARFKARLVAQGFNQQEGVDYVPEELSAPVASMDEVRTALAVGTYFDWEIEQMDIDTAYLNAPVSEEIYMRPPKGFEVSGPDGKPMVWRLRRSLYGLRQSAFNWNYTISNFFKELGFAANPTSPCVFTRRLNTGIVIIILYVDDLLLIGDKKTELDQLKLDIGQRFKAKDLGSVHHLLGMRVTRNRSEGTLKIDQERYICDMLKRFNMDSCNASYLPADTHTTLTKDGIVSTLSRGTEPTAEKTAVRPYQSLVGSLMYAAYVTRLDVANAVRVLARFMQGPTEQHWLAAKRVLRYLAGTRGLGIEFRRGNGGPLRLVGYCDANLAGDLDNGRSTTGVIFMAAGGVVSYASRLQKSVARSTMEAEYMALFEAGQTAVLLRNLLEKLGAAQLEATPLHEDNEACMLMANSAGHTRRSRHIAIRYHYTRELIEDNVIQLVSTATHGQLADGLTKNLPRERL 669
            +P +Y+EA++  D+++W  A++ E  SL    T+E+ ELP  +KAL  +WV + K   DGS  R+KARLV +GF Q+EGVDY   ++ +PV  +  +R  L +    +  +EQ+D+ TA+L+  + E+IYM  P+GF V G +   +V +LR+SLYGL+Q+   W     +F    GF       C + +  +   +I++LYVDD+L+ G    E++ LK  + ++F  KDLG    +LGMR+TR+R+ GTLK+ Q  Y+  +L RF+MD       P  +H  LTKD      S  TE      +  PY S +GSLMYA   TR D+A+AV V++R+M  P +QHW A K +LRYL GT G  + F    G  ++L GY D++LAGD+D  +STTG ++   G  VS+ SRLQK VA ST EAEY+A+ EAG+  V L+  LE+LG  Q +   LH D+++ + +A +     R++HI +RYH+ R L++   + L         AD LTK +  E+L
Sbjct:  468 EPESYDEALQIEDSIKWELAMKDEMNSLMTSQTWELIELPQRKKALHNKWVYRVKEEHDGSK-RYKARLVVKGFQQKEGVDYT--DIFSPVVKLTTIRLVLGIVAAENLHLEQLDVKTAFLHGDLEEDIYMHQPQGFIVQGKEN--LVCKLRKSLYGLKQAPRQWYKKFDSFMYSTGFTRCQADHCCYVKSFDNSYIILLLYVDDMLIAGSSIEEINNLKKQLSKQFAMKDLGPAKQILGMRITRDRANGTLKLSQTEYVKKILSRFSMDEAKPVSTPLGSHFRLTKDQ-----SPKTEQEQAYMSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRYMSNPGKQHWEAVKWILRYLKGTLGTSLCF---TGADMKLTGYVDSDLAGDVDTRKSTTGYVYTLGGTAVSWVSRLQKIVALSTTEAEYVAVTEAGKEMVWLQGFLEELGQRQKKGI-LHSDSQSAIFLAKNPAFHSRTKHIQLRYHFIRSLLDGGQLTLEKILGAKNPADMLTKGVTIEKL 972          
BLAST of mRNA_P-wetherbeei_contig12135.1.1 vs. uniprot
Match: H3G9E3_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G9E3_PHYRM)

HSP 1 Score: 360 bits (923), Expect = 9.050e-114
Identity = 194/500 (38.80%), Postives = 304/500 (60.80%), Query Frame = 0
Query:  171 LESEYLSLQEHGTFEICELPAERKALGCRWVLKKKRNTDGSVARFKARLVAQGFNQQEGVDYVPEELSAPVASMDEVRTALAVGTYFDWEIEQMDIDTAYLNAPVSEEIYMRPPKGFEVSGPDGKPMVWRLRRSLYGLRQSAFNWNYTISNFFKELGFAANPTSPCVFTRRLNTGIVIIILYVDDLLLIGDKKTELDQLKLDIGQRFKAKDLGSVHHLLGMRVTRNRSEGTLKIDQERYICDMLKRFNMDSCNASYLPADTHTTLTKDGIVSTLSRGTEPTAEKTAVR--PYQSLVGSLMYAAYVTRLDVANAVRVLARFMQGPTEQHWLAAKRVLRYLAGTRGLGIEFRRGNGGPLRLVGYCDANLAGDLDNGRSTTGVIFMAAGGVVSYASRLQKSVARSTMEAEYMALFEAGQTAVLLRNLLEKLGAAQLEATPLHEDNEACMLMANSAGHTRRSRHIAIRYHYTRELIEDNVIQLVSTATHGQLADGLTKNLPRER 668
            ++SE  SL++H T+E+ ++P ++KA+G +WV + KR+ +G+V +FKARLVA+G+ Q+ G+D+   +  APVA  + +  +LA     D E E +D+DTA+L   V EE+YM  P GFE        M   L+++LYG +Q+A  WN  ++   ++ GF  +   PCV+ RR      I+++YVDDL+L    K  ++ +K+ + + F  K+LG + + LG+ + RNR + T+ ++Q  YI  + ++F +D C A + PAD ++ L K             T E+  V   PY+ LVG+LMY A  TR D+A AV  +A+F +   + HW+AAKR+L+YL  T+ +GI F     G    +GY DAN AGDLD  RSTTG +F   G  +S+ S+ Q +VA S+ EAEY +L+ A Q AV LR LL+ +G     AT +++DN+ C+ +A +  +  R++HIAI++H+ R+ IE  VI+L    T   +ADG+T  L R++
Sbjct:    1 MKSEMKSLEDHNTWELVKMPRDKKAIGFKWVFRIKRDPNGNVVKFKARLVAKGYTQRPGIDFT--DTFAPVAREESINASLATAAEEDMEAENVDVDTAFLYGDVEEELYMDQPDGFEDQS--NPAMKCLLKQALYGTKQAARQWNSKLNKHLEDQGFRRSDADPCVYVRRSTDEYSIVVIYVDDLMLFSKTKEHIESIKVALKKEFSIKELGELKYCLGIEIDRNREDKTILMNQRAYIKRLAEKFGVDKCKAVHTPADCNSKLVK------------MTEEEAFVAKYPYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDMGIVFNGAIKG--EPIGYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYTSLYSATQEAVRLRLLLKDMGYEDQGATLIYQDNQGCIALAKNPVYHARTKHIAIKFHFLRDKIERAVIRLDYKPTDEMIADGMTNALTRDK 482          
BLAST of mRNA_P-wetherbeei_contig12135.1.1 vs. uniprot
Match: A0A438E2Y0_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438E2Y0_VITVI)

HSP 1 Score: 367 bits (942), Expect = 1.120e-113
Identity = 199/519 (38.34%), Postives = 321/519 (61.85%), Query Frame = 0
Query:  146 IASDLDPATYEEAMRSSDAVQWRKALESEYLSLQEHGTFEICELPAERKALGCRWVLKKKRNTDGSVARFKARLVAQGFNQQEGVDYVPEELSAPVASMDEVRTALAVGTYFDWEIEQMDIDTAYLNAPVSEEIYMRPPKGFEVSGPDGKPMVWRLRRSLYGLRQSAFNWNYTISNFFKELGFAANPTSPCVFTRRLNTG-IVIIILYVDDLLLIGDKKTELDQLKLDIGQRFKAKDLGSVHHLLGMRVTRNRSEGTLKIDQERYICDMLKRFNMDSCNASYLPADTHTTLTKDGIVSTLSRGTEPTAEKTAVRPYQSLVGSLMYAAYVTRLDVANAVRVLARFMQGPTEQHWLAAKRVLRYLAGTRGLGIEFRRGNGGPLRLVGYCDANLAGDLDNGRSTTGVIFMAAGGVVSYASRLQKSVARSTMEAEYMALFEAGQTAVLLRNLLEKLGAAQLEATPLHEDNEACMLMANSAGHTRRSRHIAIRYHYTRELIEDNVIQLVSTATHGQLADGLTKN 663
            I+   +P TY+E ++  +  +W KA++ E  SL E+ T+++ + P  +K L  +WV ++K + + S  RFKARLV +GF+Q++GVD+  +E+ +PV  M  +RT L +    + E+EQ+D+ TA+L+  + EEIYM  P+GF   G D   +V +L++SLYGL+Q+   W     +F  E G++   +  CVF ++   G  +I++LYVDD+L++G   +++ +LK ++ + F  KDLG    +LG+R+ R+RS G + + QE Y+  +L+RFNMD       P   H  L+     S      E   E   + PY S +GSLMYA   TR D+A+AV V++RFM  P ++HW A K +LRYL GT  + + F  G G P+ LVG+ D+++AGD+D+ +ST+G +   AGG V++ SRLQK VA ST EAE++A+ EA +  + L+  L++LG  Q E   LH D+++ + ++ ++    RS+HI +RYH+ R+++ D ++QL    T    +D LTK+
Sbjct:  209 ISDQGEPETYQEVLKHENKTEWLKAMKEEMKSLHENHTYDLVKPPKGKKILKNKWVFRRKNDGNSSQPRFKARLVVKGFDQRKGVDF--DEIFSPVVKMSSIRTVLGIAASMNLEVEQLDVKTAFLHGDLEEEIYMEQPEGFIDKGND--QLVCKLKKSLYGLKQAPRQWYRKFDSFMTEHGYSRTTSDHCVFVKKYPDGNFIILLLYVDDMLIVGQDMSKISKLKSELSKSFAMKDLGPAKQILGIRIVRDRSHGLIWLSQENYVKKVLERFNMDKAKPVNCPLAGHFKLSS----SQCPTSDEEKNEMQKI-PYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSNPGKEHWAAVKWILRYLQGTSKMSLCF--GKGEPI-LVGFTDSDMAGDVDSRKSTSGYLITFAGGAVTWQSRLQKCVALSTTEAEFIAITEACKELLWLKKFLQELGLKQ-ERYVLHCDSQSAIHLSKNSSFHSRSKHIDVRYHWIRDVLNDKLLQLEKVHTDDNTSDMLTKD 714          
BLAST of mRNA_P-wetherbeei_contig12135.1.1 vs. uniprot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Pentapetalae TaxID=1437201 RepID=POLX_TOBAC)

HSP 1 Score: 380 bits (975), Expect = 2.070e-113
Identity = 209/524 (39.89%), Postives = 323/524 (61.64%), Query Frame = 0
Query:  146 IASDLDPATYEEAMRSSDAVQWRKALESEYLSLQEHGTFEICELPAERKALGCRWVLKKKRNTDGSVARFKARLVAQGFNQQEGVDYVPEELSAPVASMDEVRTALAVGTYFDWEIEQMDIDTAYLNAPVSEEIYMRPPKGFEVSGPDGKPMVWRLRRSLYGLRQSAFNWNYTISNFFKELGFAANPTSPCVFTRRLN-TGIVIIILYVDDLLLIGDKKTELDQLKLDIGQRFKAKDLGSVHHLLGMRVTRNRSEGTLKIDQERYICDMLKRFNMDSCNASYLPADTHTTLTKDGIVSTLSRGTEPTAEKTAVRPYQSLVGSLMYAAYVTRLDVANAVRVLARFMQGPTEQHWLAAKRVLRYLAGTRGLGIEFRRGNGGPLRLVGYCDANLAGDLDNGRSTTGVIFMAAGGVVSYASRLQKSVARSTMEAEYMALFEAGQTAVLLRNLLEKLGAAQLEATPLHEDNEACMLMANSAGHTRRSRHIAIRYHYTRELIEDNVIQLVSTATHGQLADGLTKNLPRER 668
            I+ D +P + +E +   +  Q  KA++ E  SLQ++GT+++ ELP  ++ L C+WV K K++ D  + R+KARLV +GF Q++G+D+  +E+ +PV  M  +RT L++    D E+EQ+D+ TA+L+  + EEIYM  P+GFEV+G   K MV +L +SLYGL+Q+   W     +F K   +    + PCV+ +R +    +I++LYVDD+L++G  K  + +LK D+ + F  KDLG    +LGM++ R R+   L + QE+YI  +L+RFNM +      P   H  L+K    +T+           A  PY S VGSLMYA   TR D+A+AV V++RF++ P ++HW A K +LRYL GT G  + F  G   P+ L GY DA++AGD+DN +S+TG +F  +GG +S+ S+LQK VA ST EAEY+A  E G+  + L+  L++LG  Q E     +   A  L  NS  H R ++HI +RYH+ RE+++D  ++++  +T+   AD LTK +PR +
Sbjct:  805 ISDDREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDF--DEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGK--KHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEE-----KGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCF--GGSDPI-LKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQKEYVVYCDSQSAIDLSKNSMYHAR-TKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNK 1315          
BLAST of mRNA_P-wetherbeei_contig12135.1.1 vs. uniprot
Match: A0A4Y1QVA4_PRUDU (Toll-Interleukin-Resistance domain family protein n=10 Tax=fabids TaxID=91835 RepID=A0A4Y1QVA4_PRUDU)

HSP 1 Score: 361 bits (927), Expect = 2.260e-113
Identity = 206/519 (39.69%), Postives = 307/519 (59.15%), Query Frame = 0
Query:  151 DPATYEEAMRSSDAVQWRKALESEYLSLQEHGTFEICELPAERKALGCRWVLKKKRNTDGSVARFKARLVAQGFNQQEGVDYVPEELSAPVASMDEVRTALAVGTYFDWEIEQMDIDTAYLNAPVSEEIYMRPPKGFEVSGPDGKPMVWRLRRSLYGLRQSAFNWNYTISNFFKELGFAANPTSPCVFTRRLNTGIVIIILYVDDLLLIGDKKTELDQLKLDIGQRFKAKDLGSVHHLLGMRVTRNRSEGTLKIDQERYICDMLKRFNMDSCNASYLPADTHTTLTKDGIVSTLSRGTEPTAEKTAVRPYQSLVGSLMYAAYVTRLDVANAVRVLARFMQGPTEQHWLAAKRVLRYLAGTRGLGIEFRRGNGGPLRLVGYCDANLAGDLDNGRSTTGVIFMAAGGVVSYASRLQKSVARSTMEAEYMALFEAGQTAVLLRNLLEKLGAAQLEATPLHEDNEACMLMANSAGHTRRSRHIAIRYHYTRELIEDNVIQLVSTATHGQLADGLTKNLPRERL 669
            +P  Y+EA ++ DA +W  A++ E  SL  + T+E+ ELP  +KAL  +WV + K   DGS  R+KARLV +GF Q+EGVDY   ++ APV  ++ +R+ L++    D  +EQ+D+ TA+L+  + EEIYM  P+GF   G   K MV RL++SLYGL+Q+   W     +F  + GF       C + +R  +  +I++LYVDD+L+ G    ++ +LK  + + F  KDLG    +LGM++TR++  G L++ Q  YI  +L+RFNM        P  +H  L+KD      S  TE   +  A  PY S +GSLMYA   TR D+ +AV V++RFM  P + HW A K +LRYL GT    + F +G    L++ GY DA+  G++D+ RSTTG IF      VS+ S+LQK V  ST EAEY+A+ EA +  + L+ LL +LG  Q E   LH D+++ + +A ++    R++HI +RYH+ R L+ED V+ L         AD LTK +  ++L
Sbjct:   55 EPECYDEACQTGDASKWELAMKDEMRSLISNQTWELAELPVGKKALHNKWVYRVKEEHDGSK-RYKARLVVKGFQQKEGVDYT--DIFAPVVKLNTIRSVLSIVAIEDLYLEQLDVKTAFLHGDLDEEIYMHQPEGFSERG--NKNMVCRLKKSLYGLKQAPRQWYKKFDSFMHKEGFQKCNADHCCYFKRYRSSYIILLLYVDDMLVAGSDMDDIRRLKQQLSKEFDMKDLGPAKKILGMQITRDKHRGILQLSQTEYINRVLQRFNMGDAKPVSTPLASHFHLSKDQ-----SPQTEEERDLMAKVPYASAIGSLMYAMVCTRPDIGHAVGVVSRFMSNPGKAHWEAVKWILRYLQGTSEKCLYFGKGE---LKVQGYVDADFGGEVDHRRSTTGYIFTVGNTAVSWMSQLQKIVTLSTTEAEYVAVTEASKEMIWLQGLLTELGFKQ-EKNVLHSDSQSAIHLAKNSAFHSRTKHIGLRYHFIRSLLEDEVLTLEKIQGSKNPADMLTKTVTIDKL 559          
BLAST of mRNA_P-wetherbeei_contig12135.1.1 vs. uniprot
Match: A0A2U1Q8Q6_ARTAN (Polyprotein n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1Q8Q6_ARTAN)

HSP 1 Score: 360 bits (924), Expect = 3.130e-112
Identity = 202/529 (38.19%), Postives = 301/529 (56.90%), Query Frame = 0
Query:  146 IASDL-DPATYEEAMRSSDAVQWRKALESEYLSLQEHGTFEICELPAERKALGCRWVLKKKRNTDGSVARFKARLVAQGFNQQEGVDYVPEELSAPVASMDEVRTALAVGTYFDWEIEQMDIDTAYLNAPVSEEIYMRPPKGFEVSGPDGKPMVWRLRRSLYGLRQSAFNWNYTISNFFKELGFAANPTSPCVFTRRLNTGIVIIILYVDDLLLIGDKKTELDQLKLDIGQRFKAKDLGSVHHLLGMRVTRNRSEGTLKIDQERYICDMLKRFNMDSCNASYLPADTHTTLTKDGIVSTLSRGTEPTAEKTAVRPYQSLVGSLMYAAYVTRLDVANAVRVLARFMQGPTEQHWLAAKRVLRYLAGTRGLGIEFRRGNGGPLRLVGYCDANLAGDLDNGRSTTGVIFMAAGGVVSYASRLQKSVARSTMEAEYMALFEAGQTAVLLRNLLEKLGAAQLEATPLHE--DNEACMLMANSAGHTRRSRHIAIRYHYTRELIEDNVIQLVSTATHGQLADGLTKNLPRERLTE 671
            I  DL +P +Y+ AM S +  +W+ A+  E  S++++  +E  + P   K +G +W+ K K + DG V  +KARLVA+G+ Q  GVDY  EE  +P+A +  +R  LA+ TY+D+EI QMD+ TA+LN  + E+IYM  P+GF    P+    V +L+RS+YGL+Q++  WN       K  GF  N   PCV+ +   + +  +ILYVDD+L++G+    L ++K  +G+ F  KDLG   ++LG+++ R+RS+  + + Q  YI  +LKRFNM +    YLP  T     + G+ S L   T          PY S VGS+MYA   TR DVA A  + +R+ Q P  +HW A K +L+YL  TR + + +       L + GYCDA+   D D+ +S TG +F+  GG V + S+ Q ++A S  EAEY+A  EA   AV +R  +  LG       P++   DN A +  AN  G  + +RH   RYHY RE ++   I L+   T   LAD  TK LP+E+LT+
Sbjct:   93 ILGDLNEPTSYKAAMNSPEKEKWQGAMNGEMQSMRDNEVWEEVDPPPNTKVVGSKWLYKLKTDMDGIVHTYKARLVAKGYTQTFGVDY--EETFSPLADIRAIRILLAIATYYDYEIWQMDVKTAFLNGRLDEDIYMAQPEGFV--NPEFPNRVCKLKRSIYGLKQASRQWNKRFDAEIKSFGFTQNLDEPCVYQKASGSNVTFLILYVDDILILGNHIPSLKEVKSYLGKCFAMKDLGEAAYILGIKIYRDRSKRLIGLSQSAYIDKILKRFNMQNSKKGYLPMQT-----EHGLSSKLCASTPEEVAIMKKVPYASAVGSIMYAVRCTRPDVAFAQNMTSRYQQNPGGKHWHAVKGILKYLRNTRDMFLVYGGNPDAELDVTGYCDASFETDKDDTKSQTGYVFVINGGAVDWKSKKQTTIAMSVTEAEYIAASEAAMEAVWIRKFISGLGVMPSIELPINMYCDNSAAVTFANEPGVMKGARHFPRRYHYVREQVDIGEINLLKIHTDNNLADPFTKALPKEKLTQ 612          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12135.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A438BTG2_VITVI1.840e-11637.98Retrovirus-related Pol polyprotein from transposon... [more]
A0A6G0HFF8_LARCR1.660e-11540.12Copia protein Gag-int-pol protein Copia VLP protei... [more]
W7TJ26_9STRA3.350e-11540.19Gag-pol polyprotein n=2 Tax=Nannochloropsis gadita... [more]
UPI001161C4662.240e-11438.34Ty1/Copia family RNAse HI domain-containing protei... [more]
A0A2N9HZ30_FAGSY3.310e-11439.88Integrase catalytic domain-containing protein n=1 ... [more]
H3G9E3_PHYRM9.050e-11438.80Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A438E2Y0_VITVI1.120e-11338.34Retrovirus-related Pol polyprotein from transposon... [more]
POLX_TOBAC2.070e-11339.89Retrovirus-related Pol polyprotein from transposon... [more]
A0A4Y1QVA4_PRUDU2.260e-11339.69Toll-Interleukin-Resistance domain family protein ... [more]
A0A2U1Q8Q6_ARTAN3.130e-11238.19Polyprotein n=1 Tax=Artemisia annua TaxID=35608 Re... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 183..429
e-value: 1.3E-64
score: 218.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 111..133
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 137..522
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 528..667
e-value: 8.648E-58
score: 189.602
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 256..585

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12135contigP-wetherbeei_contig12135:25..2037 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12135.1.1mRNA_P-wetherbeei_contig12135.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig12135 25..2039 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig12135.1.1 ID=prot_P-wetherbeei_contig12135.1.1|Name=mRNA_P-wetherbeei_contig12135.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=671bp
GEPEPNLVAESEPATAAASYWLPNGYEIVPKFDQASMGRRLVKKEIAYKW
SDKWHWGKVVAFLPKQANGLCYDVKYPLDPDDPEGRIPHGLAEQTYNTAV
DAPPGSWHIVQRRTGRRKAAPAPGENSSKETSGAAATYAAGMAAAIASDL
DPATYEEAMRSSDAVQWRKALESEYLSLQEHGTFEICELPAERKALGCRW
VLKKKRNTDGSVARFKARLVAQGFNQQEGVDYVPEELSAPVASMDEVRTA
LAVGTYFDWEIEQMDIDTAYLNAPVSEEIYMRPPKGFEVSGPDGKPMVWR
LRRSLYGLRQSAFNWNYTISNFFKELGFAANPTSPCVFTRRLNTGIVIII
LYVDDLLLIGDKKTELDQLKLDIGQRFKAKDLGSVHHLLGMRVTRNRSEG
TLKIDQERYICDMLKRFNMDSCNASYLPADTHTTLTKDGIVSTLSRGTEP
TAEKTAVRPYQSLVGSLMYAAYVTRLDVANAVRVLARFMQGPTEQHWLAA
KRVLRYLAGTRGLGIEFRRGNGGPLRLVGYCDANLAGDLDNGRSTTGVIF
MAAGGVVSYASRLQKSVARSTMEAEYMALFEAGQTAVLLRNLLEKLGAAQ
LEATPLHEDNEACMLMANSAGHTRRSRHIAIRYHYTRELIEDNVIQLVST
ATHGQLADGLTKNLPRERLTE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR043502DNA/RNA_pol_sf