prot_P-wetherbeei_contig1212.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1212.2.1
Unique Nameprot_P-wetherbeei_contig1212.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length72
Homology
BLAST of mRNA_P-wetherbeei_contig1212.2.1 vs. uniprot
Match: D7FVT2_ECTSI (RNase_PH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVT2_ECTSI)

HSP 1 Score: 84.7 bits (208), Expect = 1.670e-18
Identity = 43/64 (67.19%), Postives = 51/64 (79.69%), Query Frame = 0
Query:    9 RSDGRRGNLLRSLYAEQKALHRADGSARFVQGNTSVLVAVYGPAPSKVARRERPDRATVDVTWR 72
            R DGRR N +R L AEQ  L+RADGSARFVQGNTSVL AVYGPAP+K  R ER + AT+DV+++
Sbjct:    5 RRDGRRANQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKSLRMERSEGATLDVSFK 68          
BLAST of mRNA_P-wetherbeei_contig1212.2.1 vs. uniprot
Match: A0A835ZF16_9STRA (Ribosomal protein S5 domain 2-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF16_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 2.300e-17
Identity = 39/65 (60.00%), Postives = 50/65 (76.92%), Query Frame = 0
Query:    8 LRSDGRRGNLLRSLYAEQKALHRADGSARFVQGNTSVLVAVYGPAPSKVARRERPDRATVDVTWR 72
            LR DGR G+ +R L+A+Q  L+RADGS RF  GNTSVLVAVYGPA     ++E+PDRA ++V+WR
Sbjct:    5 LRFDGRTGDQIRGLFADQGILNRADGSVRFGAGNTSVLVAVYGPAQPAQQKKEKPDRAIIEVSWR 69          
BLAST of mRNA_P-wetherbeei_contig1212.2.1 vs. uniprot
Match: F0W748_9STRA (Uncharacterized protein AlNc14C28G2677 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W748_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 3.140e-13
Identity = 36/65 (55.38%), Postives = 45/65 (69.23%), Query Frame = 0
Query:    8 LRSDGRRGNLLRSLYAEQKALHRADGSARFVQGNTSVLVAVYGPAPSKVARRERPDRATVDVTWR 72
            LR DGR  N LR + +EQ  LHRADGS+    G+T+VLVAVYGP  +K+AR E  D+A +DV  R
Sbjct:    5 LRDDGRNCNELRQISSEQGTLHRADGSSNLTFGDTTVLVAVYGPGQAKIARNELVDKAAIDVCVR 69          
BLAST of mRNA_P-wetherbeei_contig1212.2.1 vs. uniprot
Match: A0A8K1FJB6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJB6_PYTOL)

HSP 1 Score: 69.3 bits (168), Expect = 9.100e-13
Identity = 36/64 (56.25%), Postives = 43/64 (67.19%), Query Frame = 0
Query:    9 RSDGRRGNLLRSLYAEQKALHRADGSARFVQGNTSVLVAVYGPAPSKVARRERPDRATVDVTWR 72
            R DGR GN LR    +Q AL RADGSAR   GN++VLVAVYGP   K  R E+ DR T+DV ++
Sbjct:    8 RHDGRAGNELRPFACDQGALFRADGSARMSHGNSTVLVAVYGPGQPKSRRNEQVDRVTLDVCFK 71          
BLAST of mRNA_P-wetherbeei_contig1212.2.1 vs. uniprot
Match: A0A7S2VZA9_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2VZA9_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.520e-11
Identity = 35/65 (53.85%), Postives = 43/65 (66.15%), Query Frame = 0
Query:    9 RSDGRRGN-LLRSLYAEQKALHRADGSARFVQGNTSVLVAVYGPAPSKVARRERPDRATVDVTWR 72
            R DGR G   LR L AE   L RADGSA+F  G+T+VL AVYGP   +++ RE PDRA + V W+
Sbjct:   11 RPDGRDGGGKLRPLSAELSTLTRADGSAKFCAGSTTVLAAVYGPVAPRMSNRELPDRAMISVVWK 75          
BLAST of mRNA_P-wetherbeei_contig1212.2.1 vs. uniprot
Match: A0A024GCT1_9STRA (RNase_PH domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GCT1_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 2.650e-11
Identity = 34/62 (54.84%), Postives = 43/62 (69.35%), Query Frame = 0
Query:    8 LRSDGRRGNLLRSLYAEQKALHRADGSARFVQGNTSVLVAVYGPAPSKVARRERPDRATVDV 69
            LR DGR  N LR + +EQ  L+RADGS+    G+TSVLVAVYGP  +K+ R E  D+A +DV
Sbjct:    2 LRDDGRNCNELRQIASEQGTLNRADGSSNLSIGDTSVLVAVYGPGQAKIVRNELVDKAAIDV 63          
BLAST of mRNA_P-wetherbeei_contig1212.2.1 vs. uniprot
Match: A0A024TBK6_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024TBK6_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 3.590e-11
Identity = 34/64 (53.12%), Postives = 44/64 (68.75%), Query Frame = 0
Query:    9 RSDGRRGNLLRSLYAEQKALHRADGSARFVQGNTSVLVAVYGPAPSKVARRERPDRATVDVTWR 72
            R DGR    +R L  EQ  L+RADGSARF  G+TSVL +V GPA +K+ R E+ D ATV+V ++
Sbjct:   10 RDDGRLVQEIRPLSCEQGLLNRADGSARFCHGSTSVLASVNGPAAAKIRRHEKVDAATVEVVFK 73          
BLAST of mRNA_P-wetherbeei_contig1212.2.1 vs. uniprot
Match: A0A1E5W445_9POAL (Exosome complex exonuclease RRP46-like protein n=3 Tax=Panicoideae TaxID=147369 RepID=A0A1E5W445_9POAL)

HSP 1 Score: 62.8 bits (151), Expect = 5.910e-11
Identity = 31/64 (48.44%), Postives = 41/64 (64.06%), Query Frame = 0
Query:    9 RSDGRRGNLLRSLYAEQKALHRADGSARFVQGNTSVLVAVYGPAPSKVARRERPDRATVDVTWR 72
            R+DGR  N LR        LHRA GSAR+ QG+T VL AVYGP P    + E P++A+++V W+
Sbjct:    6 RADGRNPNQLRPFSCTGNPLHRAHGSARWAQGDTVVLAAVYGPKPG-TRKGENPEKASIEVVWK 68          
BLAST of mRNA_P-wetherbeei_contig1212.2.1 vs. uniprot
Match: A0A1V9ZVY3_9STRA (U4/U6 small nuclear ribonucleoprotein Prp4 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZVY3_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 6.990e-11
Identity = 33/64 (51.56%), Postives = 45/64 (70.31%), Query Frame = 0
Query:    9 RSDGRRGNLLRSLYAEQKALHRADGSARFVQGNTSVLVAVYGPAPSKVARRERPDRATVDVTWR 72
            R DGR    +R L  EQ  L+RADGSARF  G TSV+ +V GPAP+K+ R+E  ++AT+DV ++
Sbjct:  504 REDGRSVQEIRPLACEQGLLNRADGSARFNHGTTSVMASVSGPAPAKIRRQENVNQATLDVVFK 567          
BLAST of mRNA_P-wetherbeei_contig1212.2.1 vs. uniprot
Match: A0A485KL27_9STRA (Aste57867_8748 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KL27_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 9.550e-11
Identity = 33/64 (51.56%), Postives = 44/64 (68.75%), Query Frame = 0
Query:    9 RSDGRRGNLLRSLYAEQKALHRADGSARFVQGNTSVLVAVYGPAPSKVARRERPDRATVDVTWR 72
            R DGR    +R L  EQ  L+RADGSARF  G TSVL +V GPA +K+ R+E+ D AT++V ++
Sbjct:    8 RGDGRLVQEIRPLSCEQGLLNRADGSARFSHGTTSVLASVNGPAAAKIRRQEKVDEATLEVVFK 71          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1212.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVT2_ECTSI1.670e-1867.19RNase_PH domain-containing protein n=2 Tax=Ectocar... [more]
A0A835ZF16_9STRA2.300e-1760.00Ribosomal protein S5 domain 2-type protein n=1 Tax... [more]
F0W748_9STRA3.140e-1355.38Uncharacterized protein AlNc14C28G2677 n=1 Tax=Alb... [more]
A0A8K1FJB6_PYTOL9.100e-1356.25Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S2VZA9_9STRA1.520e-1153.85Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A024GCT1_9STRA2.650e-1154.84RNase_PH domain-containing protein n=1 Tax=Albugo ... [more]
A0A024TBK6_9STRA3.590e-1153.13Uncharacterized protein n=2 Tax=Aphanomyces TaxID=... [more]
A0A1E5W445_9POAL5.910e-1148.44Exosome complex exonuclease RRP46-like protein n=3... [more]
A0A1V9ZVY3_9STRA6.990e-1151.56U4/U6 small nuclear ribonucleoprotein Prp4 n=1 Tax... [more]
A0A485KL27_9STRA9.550e-1151.56Aste57867_8748 protein n=1 Tax=Aphanomyces stellat... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027408PNPase/RNase PH domain superfamilyGENE3D3.30.230.70coord: 6..72
e-value: 2.0E-16
score: 62.1
IPR001247Exoribonuclease, phosphorolytic domain 1PFAMPF01138RNase_PHcoord: 18..69
e-value: 1.5E-8
score: 35.2
NoneNo IPR availablePANTHERPTHR11953EXOSOME COMPLEX COMPONENTcoord: 5..72
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 6..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1212contigP-wetherbeei_contig1212:7399..7614 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1212.2.1mRNA_P-wetherbeei_contig1212.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1212 7399..7614 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1212.2.1 ID=prot_P-wetherbeei_contig1212.2.1|Name=mRNA_P-wetherbeei_contig1212.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=72bp
MQGALSGLRSDGRRGNLLRSLYAEQKALHRADGSARFVQGNTSVLVAVYG
PAPSKVARRERPDRATVDVTWR
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027408PNPase/RNase_PH_dom_sf
IPR001247ExoRNase_PH_dom1
IPR020568Ribosomal_S5_D2-typ_fold