mRNA_P-wetherbeei_contig12035.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12035.1.1
Unique NamemRNA_P-wetherbeei_contig12035.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig12035.1.1 vs. uniprot
Match: A0A140GVV4_9HYPH (Pyruvate dehydrogenase E1 component n=2 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A140GVV4_9HYPH)

HSP 1 Score: 768 bits (1984), Expect = 1.200e-272
Identity = 380/451 (84.26%), Postives = 406/451 (90.02%), Query Frame = 1
Query:    1 RQARKIRPGHEWDKFEGLDAPAGHIQQFLDRVPFASGGPRRLKAPQVEVPAELAITIQPEMSTQFGFGALLNEIARGTTPLASRIVTTSPDVTVSTNLGPWVNRRGLFARETLADTFKSESIPSTFNWSFSPKGQHIELGIAESNLFTLLSALGLSHSLNGERLLPIGTLYDPFIARGLDALNYACYQEARFILVATPSGITLAPEGGAHQSIAQPLIGMAQDGLATFEPAYVDELAAILQFALGYIQKDGDGAASERNWLRDETGGSVYLRLSTRPVEQIKRPMTPELHQAIVDGAYWLREPGPNCQVIVAYAGAVAPEAIQAIGLMAEDRRDVGLLAVTSADRLNAGWTAAQRARERGLVHARSHIERLLDGIPANCGMVTVLDGHPATLAWLGSVYGHRVRPLGVEHFGQTGSIPDLYRHYGIDANAIVAAAEAIAPGRPIRYLKALG 1353
            RQA  I  G EW+ FEGL A    IQ FLD+VPFA GGPRRLKAPQ+ VP ELA+TIQPEMSTQFGFGA+LNE+ARG + LA RIVTTSPDVTVSTNLGPWVNRRGLFARE++ADTFKSE IPSTFNW FSPKGQHIELGIAE NLF  LSALGLSHS+NGERL+PIGTLYDPFIARGLDALNYACYQEARFI+ ATPSGITLAPEGGAHQSIAQPLIGMAQDGLA+FEPA+VDELAAI+ FA  YIQK+  G  SE NWLRDETGGSVYLRLSTRPVEQIKR MTPEL Q IVDGAYWLREPGPNCQV+VAY+G VAPEAIQA GLMAEDRRDVGLLAVTSADRLNAGWTAA RARERGLVHARSHIERL + +P NC +VTVLDGHPATL WLGSVYGHR RPLGVEHFGQTG+I DLYRH+GIDANAI+AAAEAIAPGRPIR+L+ALG
Sbjct:  369 RQAMNIGTGQEWEPFEGLRAAPSQIQAFLDKVPFAQGGPRRLKAPQIAVPDELAVTIQPEMSTQFGFGAILNELARGGSKLAERIVTTSPDVTVSTNLGPWVNRRGLFARESMADTFKSERIPSTFNWEFSPKGQHIELGIAEMNLFIALSALGLSHSINGERLIPIGTLYDPFIARGLDALNYACYQEARFIIAATPSGITLAPEGGAHQSIAQPLIGMAQDGLASFEPAFVDELAAIMAFAFAYIQKES-GETSESNWLRDETGGSVYLRLSTRPVEQIKRTMTPELRQGIVDGAYWLREPGPNCQVVVAYSGTVAPEAIQATGLMAEDRRDVGLLAVTSADRLNAGWTAALRARERGLVHARSHIERLFETLPPNCALVTVLDGHPATLGWLGSVYGHRTRPLGVEHFGQTGTIADLYRHHGIDANAIIAAAEAIAPGRPIRHLRALG 818          
BLAST of mRNA_P-wetherbeei_contig12035.1.1 vs. uniprot
Match: A0A212QI03_9HYPH (Pyruvate dehydrogenase E1 component n=1 Tax=Rhodoplanes sp. JGI PP 4-B12 TaxID=1873883 RepID=A0A212QI03_9HYPH)

HSP 1 Score: 745 bits (1924), Expect = 8.030e-267
Identity = 367/449 (81.74%), Postives = 400/449 (89.09%), Query Frame = 1
Query:    1 RQARKIRPGHEWDKFEGLDAPAGHIQQFLDRVPFASGGPRRLKAPQVEVPAELAITIQPEMSTQFGFGALLNEIARGTTPLASRIVTTSPDVTVSTNLGPWVNRRGLFARETLADTFKSESIPSTFNWSFSPKGQHIELGIAESNLFTLLSALGLSHSLNGERLLPIGTLYDPFIARGLDALNYACYQEARFILVATPSGITLAPEGGAHQSIAQPLIGMAQDGLATFEPAYVDELAAILQFALGYIQKDGDGAASERNWLRDETGGSVYLRLSTRPVEQIKRPMTPELHQAIVDGAYWLREPGPNCQVIVAYAGAVAPEAIQAIGLMAEDRRDVGLLAVTSADRLNAGWTAAQRARERGLVHARSHIERLLDGIPANCGMVTVLDGHPATLAWLGSVYGHRVRPLGVEHFGQTGSIPDLYRHYGIDANAIVAAAEAIAPGRPIRYLKA 1347
            R++  IRPG EW +FEG++  A  IQ FLDRVPFASGG R L+A ++ VP +L ITIQP+ STQ GFGALLNE+ R  TPLA+RIVT SPDVTVST+LGPWVNRRGLFARE LADTFKSE IPSTFNW FSPKGQHIELGIAE NLF  LSALGLSH++NGERLLPIGTLYDPFIARGLDALNYACYQ+ARFILVATPSGITLAPEGGAHQSIA+PLIG+AQDGLA FEPA+VDELA I  FAL Y+Q++G G ASERNWLRDETGGSVYLRLSTRPVEQIKR MTP L QAIVDGAYWLR PGPNCQ++VAY GAVAPEAIQA+GLMAEDRRD+GLLA+TSADRLNAGWTAA RARERGLVHARSHIERL  G+  +CGMVTVLDGHPATLAWLG+V GHRVRPLGVEHFGQTG I +LYRHYGIDANAI+AAA+ IAPGRPIRYL A
Sbjct:  153 RKSMNIRPGEEWSRFEGIEHSAAEIQAFLDRVPFASGGNRSLQAGRIAVPDDLPITIQPQTSTQLGFGALLNELGRSDTPLAARIVTASPDVTVSTSLGPWVNRRGLFAREALADTFKSERIPSTFNWEFSPKGQHIELGIAEMNLFCALSALGLSHAINGERLLPIGTLYDPFIARGLDALNYACYQDARFILVATPSGITLAPEGGAHQSIAEPLIGIAQDGLAAFEPAFVDELAVIFAFALDYMQREGGGEASERNWLRDETGGSVYLRLSTRPVEQIKREMTPMLRQAIVDGAYWLRPPGPNCQLVVAYTGAVAPEAIQAVGLMAEDRRDIGLLAITSADRLNAGWTAACRARERGLVHARSHIERLFAGLQQHCGMVTVLDGHPATLAWLGAVNGHRVRPLGVEHFGQTGLIGELYRHYGIDANAIIAAAQMIAPGRPIRYLGA 601          
BLAST of mRNA_P-wetherbeei_contig12035.1.1 vs. uniprot
Match: A0A363TVT9_9BRAD (Pyruvate dehydrogenase E1 component n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A363TVT9_9BRAD)

HSP 1 Score: 747 bits (1928), Expect = 2.040e-264
Identity = 365/450 (81.11%), Postives = 400/450 (88.89%), Query Frame = 1
Query:    1 RQARKIRPGHEWDKFEGLDAPAGHIQQFLDRVPFASGGPRRLKAPQVEVPAELAITIQPEMSTQFGFGALLNEIARGTTPLASRIVTTSPDVTVSTNLGPWVNRRGLFARETLADTFKSESIPSTFNWSFSPKGQHIELGIAESNLFTLLSALGLSHSLNGERLLPIGTLYDPFIARGLDALNYACYQEARFILVATPSGITLAPEGGAHQSIAQPLIGMAQDGLATFEPAYVDELAAILQFALGYIQKDGDGAASERNWLRDETGGSVYLRLSTRPVEQIKRPMTPELHQAIVDGAYWLREPGPNCQVIVAYAGAVAPEAIQAIGLMAEDRRDVGLLAVTSADRLNAGWTAAQRARERGLVHARSHIERLLDGIPANCGMVTVLDGHPATLAWLGSVYGHRVRPLGVEHFGQTGSIPDLYRHYGIDANAIVAAAEAIAPGRPIRYLKAL 1350
            R A ++RPGHEWD+FEGLD PA  +Q FLDRVPFA  G RRLKA  V VP  L + IQ  M+TQ GFGALLNEIARG T  A RIVTTSPDVTVSTNLGPWVNRRGLFARE + D FK E IPSTF W +SPKGQHIELGIAE NLF LLSALGLSH++NGERLLP+GTLYDPFIARGLDALNYACYQ+ARFIL ATPSGITLAPEGGAHQSI  PLIG+AQDGLA FEPA+VDELAA+L +A  YIQKDGDGA SER WLR+ETGGSVYLRLSTRP+EQ KR MTPEL +AI+DGAYWLR PGPNCQ++VAYAGAVAPEAIQA+GLMAEDRRDVGLLAVTSADRLNAGW+AAQRARERGLVHAR+HIERL   +P++CG+VTV+DGHPATLAWLG+V GHRVRPLGVEHFGQTGSI +LYRHYGIDANAIVAAA++IAPGRPIR+LKAL
Sbjct:  350 RAAMRVRPGHEWDRFEGLDFPADTLQAFLDRVPFAQAGARRLKAAPVAVPERLEVAIQGVMATQTGFGALLNEIARGDTAFARRIVTTSPDVTVSTNLGPWVNRRGLFAREAMVDLFKKERIPSTFAWDYSPKGQHIELGIAEMNLFILLSALGLSHAINGERLLPVGTLYDPFIARGLDALNYACYQDARFILAATPSGITLAPEGGAHQSIGTPLIGLAQDGLAAFEPAFVDELAAVLAWAFAYIQKDGDGAPSERTWLREETGGSVYLRLSTRPIEQPKRAMTPELAEAIIDGAYWLRPPGPNCQIVVAYAGAVAPEAIQAVGLMAEDRRDVGLLAVTSADRLNAGWSAAQRARERGLVHARAHIERLFADLPSHCGLVTVIDGHPATLAWLGAVAGHRVRPLGVEHFGQTGSIEELYRHYGIDANAIVAAAQSIAPGRPIRHLKAL 799          
BLAST of mRNA_P-wetherbeei_contig12035.1.1 vs. uniprot
Match: A0A537L6T7_9PROT (Pyruvate dehydrogenase E1 component n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537L6T7_9PROT)

HSP 1 Score: 746 bits (1927), Expect = 2.990e-264
Identity = 362/450 (80.44%), Postives = 399/450 (88.67%), Query Frame = 1
Query:    1 RQARKIRPGHEWDKFEGLDAPAGHIQQFLDRVPFASGGPRRLKAPQVEVPAELAITIQPEMSTQFGFGALLNEIARGTTPLASRIVTTSPDVTVSTNLGPWVNRRGLFARETLADTFKSESIPSTFNWSFSPKGQHIELGIAESNLFTLLSALGLSHSLNGERLLPIGTLYDPFIARGLDALNYACYQEARFILVATPSGITLAPEGGAHQSIAQPLIGMAQDGLATFEPAYVDELAAILQFALGYIQKDGDGAASERNWLRDETGGSVYLRLSTRPVEQIKRPMTPELHQAIVDGAYWLREPGPNCQVIVAYAGAVAPEAIQAIGLMAEDRRDVGLLAVTSADRLNAGWTAAQRARERGLVHARSHIERLLDGIPANCGMVTVLDGHPATLAWLGSVYGHRVRPLGVEHFGQTGSIPDLYRHYGIDANAIVAAAEAIAPGRPIRYLKAL 1350
            R+A  +RPGHEWDKFEGL  PA  +Q FLDRVPFA+  PRR +A +++VPAELA+ IQP MSTQFGFGALLNE+ RG +    RIVTTSPDVTVSTNLGPWVNRR LFARE +AD FKSE I STFNW FSP GQHIELGIAE+NLF LLSALGLSH++NGERL PIGTLYDPFIARGLDALNYACYQEARFILVATPSGITLA EGGAHQSI  PLIGMAQDGLA FEPAYVDELAAI+ ++  YIQKDG+GA SERNWLRDETGGSVYLRLSTRP+EQIKR +TPEL QAI+DGAYW+R+PGPNCQV+VAY GAVAPEAI+A+GLM EDRRDVGLLAVTSADRLNAGW+AAQRARERGLVHARSHIERL+ G+  +CG+VTV D HPATL WLG++ GHR R LGVEHFGQTGS+ +LYRHYGIDANAIVA A+AIAPGRPIRYLKAL
Sbjct:  351 REAMHVRPGHEWDKFEGLSTPANELQAFLDRVPFATKEPRRYRAKRIDVPAELAVAIQPTMSTQFGFGALLNELGRGDSDFVKRIVTTSPDVTVSTNLGPWVNRRSLFAREKMADVFKSERIASTFNWEFSPAGQHIELGIAENNLFILLSALGLSHAINGERLFPIGTLYDPFIARGLDALNYACYQEARFILVATPSGITLAGEGGAHQSIGTPLIGMAQDGLAAFEPAYVDELAAIMAWSFDYIQKDGEGAPSERNWLRDETGGSVYLRLSTRPIEQIKRTITPELRQAIIDGAYWMRKPGPNCQVVVAYTGAVAPEAIEAVGLMGEDRRDVGLLAVTSADRLNAGWSAAQRARERGLVHARSHIERLMAGLAPHCGIVTVCDAHPATLGWLGAINGHRTRALGVEHFGQTGSLAELYRHYGIDANAIVAGAQAIAPGRPIRYLKAL 800          
BLAST of mRNA_P-wetherbeei_contig12035.1.1 vs. uniprot
Match: A0A1Q7BG43_9PROT (Pyruvate dehydrogenase E1 component n=4 Tax=unclassified Alphaproteobacteria TaxID=33807 RepID=A0A1Q7BG43_9PROT)

HSP 1 Score: 745 bits (1924), Expect = 9.450e-264
Identity = 367/450 (81.56%), Postives = 403/450 (89.56%), Query Frame = 1
Query:    1 RQARKIRPGHEWDKFEGLDAPAGHIQQFLDRVPFASGGPRRLKAPQVEVPAELAITIQPEMSTQFGFGALLNEIARGTTPLASRIVTTSPDVTVSTNLGPWVNRRGLFARETLADTFKSESIPSTFNWSFSPKGQHIELGIAESNLFTLLSALGLSHSLNGERLLPIGTLYDPFIARGLDALNYACYQEARFILVATPSGITLAPEGGAHQSIAQPLIGMAQDGLATFEPAYVDELAAILQFALGYIQKDGDGAASERNWLRDETGGSVYLRLSTRPVEQIKRPMTPELHQAIVDGAYWLREPGPNCQVIVAYAGAVAPEAIQAIGLMAEDRRDVGLLAVTSADRLNAGWTAAQRARERGLVHARSHIERLLDGIPANCGMVTVLDGHPATLAWLGSVYGHRVRPLGVEHFGQTGSIPDLYRHYGIDANAIVAAAEAIAPGRPIRYLKAL 1350
            R A  IRPGHEWDKFEGL+     +QQFLDRVPFA+G  RR  A ++EVPA+L +TIQP MSTQ GFGALLNE+ R  + +A RIVT SPDVTVSTNLGPWVNRRGLFARE+LADTFKSE IPSTF W FSPKGQHIELGIAE NLF LLSALGLSH++NGERL+PIGTLYDPFI RGLDALNYACYQ+ARFILVATPSGITLAPEGGAHQSIA PLIG+AQDGLA FEPA+VDELA IL FA  YIQ+D +  ASERNWLRDETGG+VYLRLSTRP+EQIKR MTPEL QAIVDGAYW R PGPNCQV+VAYAGAV PEAIQA+GLMAEDRRDVGLLAVTSADRLNAGWTAAQRARERGLVHARSHIE+LL  +P++CG+V+V+DGHPATLAWLG+++GHRVR LGVEHFGQTGSIP+LYRHYGIDANAIVAAA A+ PGRPIR+LKAL
Sbjct:  355 RAAMNIRPGHEWDKFEGLEIARTELQQFLDRVPFAAGS-RRHHAARIEVPADLPVTIQPVMSTQTGFGALLNELGREKSAIAERIVTASPDVTVSTNLGPWVNRRGLFARESLADTFKSERIPSTFAWDFSPKGQHIELGIAEMNLFILLSALGLSHAINGERLIPIGTLYDPFIQRGLDALNYACYQDARFILVATPSGITLAPEGGAHQSIATPLIGLAQDGLAAFEPAFVDELAVILAFAFDYIQRDAEAEASERNWLRDETGGAVYLRLSTRPIEQIKRTMTPELRQAIVDGAYWQRPPGPNCQVVVAYAGAVVPEAIQAVGLMAEDRRDVGLLAVTSADRLNAGWTAAQRARERGLVHARSHIEKLLADVPSHCGIVSVIDGHPATLAWLGAMHGHRVRALGVEHFGQTGSIPELYRHYGIDANAIVAAAAALTPGRPIRHLKAL 803          
BLAST of mRNA_P-wetherbeei_contig12035.1.1 vs. uniprot
Match: UPI0018473459 (Transketolase n=1 Tax=Rhodoplanes sp. TaxID=1968906 RepID=UPI0018473459)

HSP 1 Score: 730 bits (1885), Expect = 5.930e-258
Identity = 357/450 (79.33%), Postives = 391/450 (86.89%), Query Frame = 1
Query:    1 RQARKIRPGHEWDKFEGLDAPAGHIQQFLDRVPFASGGPRRLKAPQVEVPAELAITIQPEMSTQFGFGALLNEIARGTTPLASRIVTTSPDVTVSTNLGPWVNRRGLFARETLADTFKSESIPSTFNWSFSPKGQHIELGIAESNLFTLLSALGLSHSLNGERLLPIGTLYDPFIARGLDALNYACYQEARFILVATPSGITLAPEGGAHQSIAQPLIGMAQDGLATFEPAYVDELAAILQFALGYIQKDGDGAASERNWLRDETGGSVYLRLSTRPVEQIKRPMTPELHQAIVDGAYWLREPGPNCQVIVAYAGAVAPEAIQAIGLMAEDRRDVGLLAVTSADRLNAGWTAAQRARERGLVHARSHIERLLDGIPANCGMVTVLDGHPATLAWLGSVYGHRVRPLGVEHFGQTGSIPDLYRHYGIDANAIVAAAEAIAPGRPIRYLKAL 1350
            R A +IR GHEWD FEGL+ PA  +Q FL +VPFA GGPRRLKA  VEVPA L + I P MSTQ GFG +LN I +  +P A R+VTTSPDVT+STNLG WVNRRGLFARE + DTFKSE IPST  W FSPKGQHIELGIAE NLF LLSALGLSHS++GERL PIGTLYDPFI RGLDALNYACYQ+ARFIL  TPSGITLAPEGGAHQSI  PLIGMAQDGLA FEP++VDE+AA+L FA  Y+Q++G+G ASER WLRDETGGSVYLRLSTRPVEQ +R MT EL Q I+DGAYW+R+PGPNCQV VAY GAVAPEAIQAIGLMAEDRRDVGLLAVTSADRLNAGWTAA RARERGL HARSHIERL+  +P++CG+VTVLDGHPATLAWLG+V GHR RPLGVEHFGQTGS+PDLYRHYGIDANAIVAAA+AIAPGRPIRYLKAL
Sbjct:  347 RTAMRIRTGHEWDLFEGLELPADALQTFLKKVPFAQGGPRRLKAAHVEVPATLPVEIAPTMSTQQGFGLILNGIGKDNSPFADRVVTTSPDVTMSTNLGAWVNRRGLFAREVMVDTFKSERIPSTLTWEFSPKGQHIELGIAEMNLFILLSALGLSHSIHGERLFPIGTLYDPFICRGLDALNYACYQDARFILAGTPSGITLAPEGGAHQSIGTPLIGMAQDGLAAFEPSFVDEVAAVLAFAFDYVQRNGEGEASERTWLRDETGGSVYLRLSTRPVEQPQRTMTDELRQGIIDGAYWMRKPGPNCQVAVAYTGAVAPEAIQAIGLMAEDRRDVGLLAVTSADRLNAGWTAASRARERGLPHARSHIERLMGELPSHCGIVTVLDGHPATLAWLGAVAGHRTRPLGVEHFGQTGSLPDLYRHYGIDANAIVAAAQAIAPGRPIRYLKAL 796          
BLAST of mRNA_P-wetherbeei_contig12035.1.1 vs. uniprot
Match: A0A537NCV8_9PROT (Pyruvate dehydrogenase E1 component n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537NCV8_9PROT)

HSP 1 Score: 728 bits (1879), Expect = 7.230e-257
Identity = 357/450 (79.33%), Postives = 390/450 (86.67%), Query Frame = 1
Query:    1 RQARKIRPGHEWDKFEGLDAPAGHIQQFLDRVPFASGGPRRLKAPQVEVPAELAITIQPEMSTQFGFGALLNEIARGTTPLASRIVTTSPDVTVSTNLGPWVNRRGLFARETLADTFKSESIPSTFNWSFSPKGQHIELGIAESNLFTLLSALGLSHSLNGERLLPIGTLYDPFIARGLDALNYACYQEARFILVATPSGITLAPEGGAHQSIAQPLIGMAQDGLATFEPAYVDELAAILQFALGYIQKDGDGAASERNWLRDETGGSVYLRLSTRPVEQIKRPMTPELHQAIVDGAYWLREPGPNCQVIVAYAGAVAPEAIQAIGLMAEDRRDVGLLAVTSADRLNAGWTAAQRARERGLVHARSHIERLLDGIPANCGMVTVLDGHPATLAWLGSVYGHRVRPLGVEHFGQTGSIPDLYRHYGIDANAIVAAAEAIAPGRPIRYLKAL 1350
            R A  +RPG EWDKFEGL  P   I+ FL RVPFA+GGPRRLKAP + VP EL + IQP M+TQ GFGA+LNE+ R   P   RIVT SPDVTVSTNLGPWVNRRGLFARE +ADTFK E IPSTF+W FS KGQHIELGIAE NLF LLSALGLSH++ GERL+PIGTLYDPFI RGLDALNYACYQ+ARFIL ATPSGITLAPEGGAHQSIA PLIG+AQDGLA FEPA+VDELA IL +AL YIQKDGD A SER+WLRDETGGSVYLRLSTR +EQ KR M PEL QAI+DG YWLR PGPNCQ ++AY GAVAPEA+ A+GL+AEDRRDVGLLAVTSADRLNAGWTAAQRARERGLVHAR+HIERLL  IP +CG+VTV+DGHPATLAWLG V GHRVRPLGVEHFGQTGSI DLYRHYGIDANAIVAAA+A+ PGRPIR+L+AL
Sbjct:  358 RAAMAVRPGREWDKFEGLALPPQTIEAFLKRVPFAAGGPRRLKAPPLAVPEELPVAIQPVMATQTGFGAILNELGRQRVPFTERIVTASPDVTVSTNLGPWVNRRGLFAREAMADTFKDERIPSTFHWEFSVKGQHIELGIAEMNLFLLLSALGLSHTIFGERLIPIGTLYDPFIERGLDALNYACYQDARFILAATPSGITLAPEGGAHQSIATPLIGLAQDGLAAFEPAFVDELAVILAWALAYIQKDGDAAPSERSWLRDETGGSVYLRLSTRAIEQPKRAMGPELRQAIIDGGYWLRRPGPNCQAVIAYTGAVAPEAVHAVGLIAEDRRDVGLLAVTSADRLNAGWTAAQRARERGLVHARAHIERLLADIPDHCGIVTVVDGHPATLAWLGGVAGHRVRPLGVEHFGQTGSIGDLYRHYGIDANAIVAAAQAVVPGRPIRHLRAL 807          
BLAST of mRNA_P-wetherbeei_contig12035.1.1 vs. uniprot
Match: A0A3S4AY13_9HYPH (Pyruvate dehydrogenase E1 component n=2 Tax=Rhodoplanes piscinae TaxID=444923 RepID=A0A3S4AY13_9HYPH)

HSP 1 Score: 724 bits (1869), Expect = 2.150e-255
Identity = 353/450 (78.44%), Postives = 388/450 (86.22%), Query Frame = 1
Query:    1 RQARKIRPGHEWDKFEGLDAPAGHIQQFLDRVPFASGGPRRLKAPQVEVPAELAITIQPEMSTQFGFGALLNEIARGTTPLASRIVTTSPDVTVSTNLGPWVNRRGLFARETLADTFKSESIPSTFNWSFSPKGQHIELGIAESNLFTLLSALGLSHSLNGERLLPIGTLYDPFIARGLDALNYACYQEARFILVATPSGITLAPEGGAHQSIAQPLIGMAQDGLATFEPAYVDELAAILQFALGYIQKDGDGAASERNWLRDETGGSVYLRLSTRPVEQIKRPMTPELHQAIVDGAYWLREPGPNCQVIVAYAGAVAPEAIQAIGLMAEDRRDVGLLAVTSADRLNAGWTAAQRARERGLVHARSHIERLLDGIPANCGMVTVLDGHPATLAWLGSVYGHRVRPLGVEHFGQTGSIPDLYRHYGIDANAIVAAAEAIAPGRPIRYLKAL 1350
            R A +IRPGHEWD FEGLD P   ++ FLDRVPFA GGPRR +A  V VPAEL + IQP MSTQ GFG +LN I +  +  A R+VTTSPDVT+STNLG WVNRRGLFARE + DTFKSE IPST  W FSP GQH+ELGIAE NLF LLSA GLSHSL GERL PIGTLYDPFI RGLDALNYACYQ+ARFILVATPSGITLAPEGGAHQSI  PLIG+AQDGLA FEP++VDE+AAIL FA  Y+Q+DG+G   ER WLRDETGGSVYLRLSTRP+EQ +RPMT  L Q I+DGAYW+R+PGPNCQV+VAY GAVAPEAIQA+GLMAEDRRDVGLLAVTSADRLNAGWTAA RARERGL HARSHIERLL  +P++CG+VTVLDGHPATL WLG+V GHR RPLGVEHFGQTGS+PDLYRHYGIDANAIVAAA+AIAPGRPIR+LKAL
Sbjct:  356 RAAMRIRPGHEWDHFEGLDLPEAALRTFLDRVPFAQGGPRRYRADAVTVPAELPVEIQPVMSTQQGFGLILNGIGKQDSAFADRVVTTSPDVTMSTNLGAWVNRRGLFAREPMVDTFKSERIPSTLTWEFSPTGQHVELGIAEMNLFILLSAFGLSHSLFGERLFPIGTLYDPFICRGLDALNYACYQDARFILVATPSGITLAPEGGAHQSIGTPLIGLAQDGLAAFEPSFVDEVAAILAFAFDYVQRDGEGEPCERTWLRDETGGSVYLRLSTRPIEQPQRPMTAALRQDIIDGAYWMRKPGPNCQVVVAYTGAVAPEAIQAVGLMAEDRRDVGLLAVTSADRLNAGWTAASRARERGLPHARSHIERLLAEVPSHCGLVTVLDGHPATLGWLGAVAGHRTRPLGVEHFGQTGSLPDLYRHYGIDANAIVAAAQAIAPGRPIRWLKAL 805          
BLAST of mRNA_P-wetherbeei_contig12035.1.1 vs. uniprot
Match: A0A0Q7TMV2_9HYPH (Pyruvate dehydrogenase E1 component n=3 Tax=unclassified Pseudolabrys TaxID=2638514 RepID=A0A0Q7TMV2_9HYPH)

HSP 1 Score: 723 bits (1866), Expect = 4.670e-255
Identity = 352/446 (78.92%), Postives = 399/446 (89.46%), Query Frame = 1
Query:   16 IRPGHEWDKFEGLDAPAGHIQQFLDRVPFASGGPRRLKAPQVEVPAELAITIQPEMSTQFGFGALLNEIARGTTPLASRIVTTSPDVTVSTNLGPWVNRRGLFARETLADTFKSESIPSTFNWSFSPKGQHIELGIAESNLFTLLSALGLSHSLNGERLLPIGTLYDPFIARGLDALNYACYQEARFILVATPSGITLAPEGGAHQSIAQPLIGMAQDGLATFEPAYVDELAAILQFALGYIQKDG-DGAASERNWLRDETGGSVYLRLSTRPVEQIKRPMTPELHQAIVDGAYWLREPGPNCQVIVAYAGAVAPEAIQAIGLMAEDRRDVGLLAVTSADRLNAGWTAAQRARERGLVHARSHIERLLDGIPANCGMVTVLDGHPATLAWLGSVYGHRVRPLGVEHFGQTGSIPDLYRHYGIDANAIVAAAEAIAPGRPIRYLKAL 1350
            +RPGHEWDKFEGLD P   +Q FLD+VPF SGG RRL AP + VP  L ITIQP M+TQ GFG +L+EI R  T  ASRIVTTSPDVTVSTNLGPWVNRRGLFARE +ADTFKSE IPSTFNW FSPKGQH+ELGIAESNLF  LSALGLSHS+NG RLLPIGTLYDPFIARGLD LNY CYQ++RF++VATPSG+TLA EGGAHQSIA+PLIGMAQDGLA+FEPA+VDELA I++++  Y+QKDG D  ASE++WLRDE+GGSVYLRLSTRP+EQI+R MTPEL Q I+DGAYWLREPGPNCQVIVAY+GA+APEAI A+GLMAEDRRD+GLLAVTSADRLNAGWTAAQRARERGLVHARSHIERLL  +  +CG+VTV+DGHPATL+WLG+V+G+R R LGVEHFGQTG++ DLY+HYGID+NAI+AAAEAIAPGRP+RYLKAL
Sbjct:  353 VRPGHEWDKFEGLDNP-DTLQAFLDKVPFVSGGERRLTAPAIPVPETLQITIQPTMATQTGFGTILHEIGRADTEFASRIVTTSPDVTVSTNLGPWVNRRGLFAREAMADTFKSEQIPSTFNWEFSPKGQHMELGIAESNLFINLSALGLSHSINGVRLLPIGTLYDPFIARGLDQLNYGCYQDSRFMVVATPSGVTLAGEGGAHQSIAEPLIGMAQDGLASFEPAFVDELAEIMRWSFDYMQKDGKDAEASEKSWLRDESGGSVYLRLSTRPIEQIQRTMTPELRQHIIDGAYWLREPGPNCQVIVAYSGAIAPEAIAAVGLMAEDRRDIGLLAVTSADRLNAGWTAAQRARERGLVHARSHIERLLGDLQPHCGIVTVIDGHPATLSWLGAVHGNRTRGLGVEHFGQTGTLADLYKHYGIDSNAIIAAAEAIAPGRPMRYLKAL 797          
BLAST of mRNA_P-wetherbeei_contig12035.1.1 vs. uniprot
Match: A0A1W6ZNE9_9HYPH (Pyruvate dehydrogenase E1 component n=1 Tax=Pseudorhodoplanes sinuspersici TaxID=1235591 RepID=A0A1W6ZNE9_9HYPH)

HSP 1 Score: 721 bits (1862), Expect = 1.830e-254
Identity = 353/450 (78.44%), Postives = 399/450 (88.67%), Query Frame = 1
Query:    1 RQARKIRPGHEWDKFEGLDAPAGHIQQFLDRVPFASGGPRRLKAPQVEVPAELAITIQPEMSTQFGFGALLNEIARGTTPLASRIVTTSPDVTVSTNLGPWVNRRGLFARETLADTFKSESIPSTFNWSFSPKGQHIELGIAESNLFTLLSALGLSHSLNGERLLPIGTLYDPFIARGLDALNYACYQEARFILVATPSGITLAPEGGAHQSIAQPLIGMAQDGLATFEPAYVDELAAILQFALGYIQKDGDGAASERNWLRDETGGSVYLRLSTRPVEQIKRPMTPELHQAIVDGAYWLREPGPNCQVIVAYAGAVAPEAIQAIGLMAEDRRDVGLLAVTSADRLNAGWTAAQRARERGLVHARSHIERLLDGIPANCGMVTVLDGHPATLAWLGSVYGHRVRPLGVEHFGQTGSIPDLYRHYGIDANAIVAAAEAIAPGRPIRYLKAL 1350
            R    +RP HEWD FEGL  P   ++ FL +VPFA   P+   APQ+E+P  L ++IQP MSTQ GFGAL+NEI +      SRIVTTSPDVTVSTNLG WVNRRGLF  +T+ADTFK+E IPSTF W FSPKGQHIELGIAE NLF LLSALGLSH++NGERLLPIGTLYDPFIARGLDALNYACYQ+ARFI+VATPSGITLAPEGGAHQSIAQPLIGMAQDGLA+FEPA+VDELAAI++FAL YIQK+G+GAASE+NWLRDETGGSVYLRLSTRP+EQ +R MT EL Q+IVDGAYWLR+PGPN +VIVAY GA+APEAI+A+GLMAEDRRD+GLLAVTSADRLNAGWTAAQRARERGLVHARSHIERLLD +P++ G+VTVLDGHPATL+WLG+++GHRVR LGVEHFGQTGS+PDLYRHYGIDANAI+AAA+A+  GRPIRYLKAL
Sbjct:  347 RTQNNVRPDHEWDLFEGLTLPEQTLRDFLKKVPFAQRKPQG-PAPQLEIPDTLPVSIQPTMSTQGGFGALMNEIGKAKDDYTSRIVTTSPDVTVSTNLGGWVNRRGLFGHDTVADTFKNERIPSTFAWEFSPKGQHIELGIAEMNLFILLSALGLSHAINGERLLPIGTLYDPFIARGLDALNYACYQDARFIVVATPSGITLAPEGGAHQSIAQPLIGMAQDGLASFEPAFVDELAAIMRFALDYIQKNGEGAASEKNWLRDETGGSVYLRLSTRPIEQPQRTMTDELRQSIVDGAYWLRKPGPNAEVIVAYTGAIAPEAIEAVGLMAEDRRDIGLLAVTSADRLNAGWTAAQRARERGLVHARSHIERLLDDVPSHAGIVTVLDGHPATLSWLGAIHGHRVRGLGVEHFGQTGSLPDLYRHYGIDANAIIAAAQALTAGRPIRYLKAL 795          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12035.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A140GVV4_9HYPH1.200e-27284.26Pyruvate dehydrogenase E1 component n=2 Tax=Rhodop... [more]
A0A212QI03_9HYPH8.030e-26781.74Pyruvate dehydrogenase E1 component n=1 Tax=Rhodop... [more]
A0A363TVT9_9BRAD2.040e-26481.11Pyruvate dehydrogenase E1 component n=1 Tax=Bradyr... [more]
A0A537L6T7_9PROT2.990e-26480.44Pyruvate dehydrogenase E1 component n=1 Tax=Alphap... [more]
A0A1Q7BG43_9PROT9.450e-26481.56Pyruvate dehydrogenase E1 component n=4 Tax=unclas... [more]
UPI00184734595.930e-25879.33Transketolase n=1 Tax=Rhodoplanes sp. TaxID=196890... [more]
A0A537NCV8_9PROT7.230e-25779.33Pyruvate dehydrogenase E1 component n=1 Tax=Alphap... [more]
A0A3S4AY13_9HYPH2.150e-25578.44Pyruvate dehydrogenase E1 component n=2 Tax=Rhodop... [more]
A0A0Q7TMV2_9HYPH4.670e-25578.92Pyruvate dehydrogenase E1 component n=3 Tax=unclas... [more]
A0A1W6ZNE9_9HYPH1.830e-25478.44Pyruvate dehydrogenase E1 component n=1 Tax=Pseudo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12035contigP-wetherbeei_contig12035:3..1358 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1123229.AUBC01000015_gene4723
Preferred nameMA20_17010
PFAMsTransketolase_N
Model size1356
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00004,RC00027,RC00627,RC02742,RC02744,RC02882
KEGG koko:K00163
KEGG ReactionR00014,R00209,R01699,R03270
KEGG Pathwayko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200
KEGG ModuleM00307
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.43e-246
EggNOG OGsCOG2609@1|root,COG2609@2|Bacteria,1MV21@1224|Proteobacteria,2TSZ9@28211|Alphaproteobacteria,3JRFU@41294|Bradyrhizobiaceae
EC1.2.4.1
DescriptionComponent of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
Cds size1356
COG categoryC
BRITEbr01601,ko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185935.809557-CDS-P-wetherbeei_contig12035:2..13581683185935.809557-CDS-P-wetherbeei_contig12035:2..1358Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12035 3..1358 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12035.1.1prot_P-wetherbeei_contig12035.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12035 3..1358 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12035.1.1

>prot_P-wetherbeei_contig12035.1.1 ID=prot_P-wetherbeei_contig12035.1.1|Name=mRNA_P-wetherbeei_contig12035.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=452bp
RQARKIRPGHEWDKFEGLDAPAGHIQQFLDRVPFASGGPRRLKAPQVEVP
AELAITIQPEMSTQFGFGALLNEIARGTTPLASRIVTTSPDVTVSTNLGP
WVNRRGLFARETLADTFKSESIPSTFNWSFSPKGQHIELGIAESNLFTLL
SALGLSHSLNGERLLPIGTLYDPFIARGLDALNYACYQEARFILVATPSG
ITLAPEGGAHQSIAQPLIGMAQDGLATFEPAYVDELAAILQFALGYIQKD
GDGAASERNWLRDETGGSVYLRLSTRPVEQIKRPMTPELHQAIVDGAYWL
REPGPNCQVIVAYAGAVAPEAIQAIGLMAEDRRDVGLLAVTSADRLNAGW
TAAQRARERGLVHARSHIERLLDGIPANCGMVTVLDGHPATLAWLGSVYG
HRVRPLGVEHFGQTGSIPDLYRHYGIDANAIVAAAEAIAPGRPIRYLKAL
G*
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mRNA from alignment at P-wetherbeei_contig12035:3..1358+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12035.1.1 ID=mRNA_P-wetherbeei_contig12035.1.1|Name=mRNA_P-wetherbeei_contig12035.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1356bp|location=Sequence derived from alignment at P-wetherbeei_contig12035:3..1358+ (Phaeothamnion wetherbeei SAG_119_79)
CGCCAAGCCAGGAAAATCCGGCCAGGGCACGAGTGGGACAAATTCGAGGG CCTCGACGCGCCGGCCGGGCACATCCAGCAATTCCTCGACCGTGTGCCGT TTGCAAGCGGCGGTCCGCGCCGCCTGAAAGCGCCGCAGGTCGAGGTGCCG GCGGAGCTTGCGATCACCATCCAGCCCGAGATGTCGACCCAATTCGGCTT CGGCGCGCTGCTCAACGAGATCGCGCGCGGCACGACGCCGCTCGCCTCGC GCATCGTCACCACCTCGCCCGACGTCACGGTCTCGACCAATCTCGGCCCC TGGGTCAACCGCCGCGGCCTGTTCGCGCGCGAGACGCTGGCCGACACGTT CAAGAGCGAGAGCATCCCGTCGACGTTCAACTGGTCGTTCTCGCCCAAGG GCCAGCACATCGAGCTCGGCATCGCCGAATCGAACCTGTTCACGCTGCTG TCCGCGCTCGGCCTGTCGCACTCGCTCAACGGCGAGCGGCTGCTGCCGAT CGGCACGCTGTACGACCCGTTCATCGCGCGCGGCCTCGATGCGCTCAACT ACGCCTGCTACCAGGAGGCGCGTTTCATTCTGGTGGCGACGCCGTCCGGC ATCACGCTGGCGCCCGAGGGCGGCGCGCACCAGTCGATCGCCCAGCCGCT GATCGGCATGGCACAGGACGGGCTCGCGACCTTCGAGCCGGCTTACGTCG ACGAGCTCGCCGCAATCCTGCAATTCGCGCTCGGCTACATCCAGAAGGAC GGCGACGGCGCGGCCTCCGAACGCAACTGGCTGCGCGACGAGACCGGCGG CTCGGTCTATCTGCGCCTGTCGACGCGCCCGGTTGAACAGATCAAGCGGC CGATGACGCCCGAGCTTCACCAAGCCATCGTCGACGGCGCCTATTGGCTG CGCGAGCCCGGCCCAAATTGCCAGGTGATCGTCGCATACGCCGGCGCGGT CGCGCCCGAGGCGATCCAGGCGATCGGCCTGATGGCGGAGGACCGCCGCG ATGTCGGGCTGCTCGCGGTGACCTCGGCCGACCGGCTCAACGCCGGCTGG ACCGCGGCGCAGCGTGCGCGCGAGCGCGGGCTCGTGCATGCGCGCTCGCA CATCGAGCGACTGCTCGACGGCATTCCGGCCAATTGCGGCATGGTCACCG TCCTCGACGGCCATCCGGCGACGCTCGCCTGGCTCGGCTCCGTGTACGGC CATCGCGTGCGGCCGCTCGGCGTCGAGCATTTCGGGCAGACCGGCTCGAT CCCGGACCTCTACCGGCACTACGGCATCGACGCCAACGCGATCGTCGCAG CCGCCGAGGCCATCGCGCCCGGCCGGCCGATCCGCTATCTAAAGGCGCTG GGCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig12035:3..1358+

>mRNA_P-wetherbeei_contig12035.1.1 ID=mRNA_P-wetherbeei_contig12035.1.1|Name=mRNA_P-wetherbeei_contig12035.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1356bp|location=Sequence derived from alignment at P-wetherbeei_contig12035:3..1358+ (Phaeothamnion wetherbeei SAG_119_79)
CGCCAAGCCAGGAAAATCCGGCCAGGGCACGAGTGGGACAAATTCGAGGG
CCTCGACGCGCCGGCCGGGCACATCCAGCAATTCCTCGACCGTGTGCCGT
TTGCAAGCGGCGGTCCGCGCCGCCTGAAAGCGCCGCAGGTCGAGGTGCCG
GCGGAGCTTGCGATCACCATCCAGCCCGAGATGTCGACCCAATTCGGCTT
CGGCGCGCTGCTCAACGAGATCGCGCGCGGCACGACGCCGCTCGCCTCGC
GCATCGTCACCACCTCGCCCGACGTCACGGTCTCGACCAATCTCGGCCCC
TGGGTCAACCGCCGCGGCCTGTTCGCGCGCGAGACGCTGGCCGACACGTT
CAAGAGCGAGAGCATCCCGTCGACGTTCAACTGGTCGTTCTCGCCCAAGG
GCCAGCACATCGAGCTCGGCATCGCCGAATCGAACCTGTTCACGCTGCTG
TCCGCGCTCGGCCTGTCGCACTCGCTCAACGGCGAGCGGCTGCTGCCGAT
CGGCACGCTGTACGACCCGTTCATCGCGCGCGGCCTCGATGCGCTCAACT
ACGCCTGCTACCAGGAGGCGCGTTTCATTCTGGTGGCGACGCCGTCCGGC
ATCACGCTGGCGCCCGAGGGCGGCGCGCACCAGTCGATCGCCCAGCCGCT
GATCGGCATGGCACAGGACGGGCTCGCGACCTTCGAGCCGGCTTACGTCG
ACGAGCTCGCCGCAATCCTGCAATTCGCGCTCGGCTACATCCAGAAGGAC
GGCGACGGCGCGGCCTCCGAACGCAACTGGCTGCGCGACGAGACCGGCGG
CTCGGTCTATCTGCGCCTGTCGACGCGCCCGGTTGAACAGATCAAGCGGC
CGATGACGCCCGAGCTTCACCAAGCCATCGTCGACGGCGCCTATTGGCTG
CGCGAGCCCGGCCCAAATTGCCAGGTGATCGTCGCATACGCCGGCGCGGT
CGCGCCCGAGGCGATCCAGGCGATCGGCCTGATGGCGGAGGACCGCCGCG
ATGTCGGGCTGCTCGCGGTGACCTCGGCCGACCGGCTCAACGCCGGCTGG
ACCGCGGCGCAGCGTGCGCGCGAGCGCGGGCTCGTGCATGCGCGCTCGCA
CATCGAGCGACTGCTCGACGGCATTCCGGCCAATTGCGGCATGGTCACCG
TCCTCGACGGCCATCCGGCGACGCTCGCCTGGCTCGGCTCCGTGTACGGC
CATCGCGTGCGGCCGCTCGGCGTCGAGCATTTCGGGCAGACCGGCTCGAT
CCCGGACCTCTACCGGCACTACGGCATCGACGCCAACGCGATCGTCGCAG
CCGCCGAGGCCATCGCGCCCGGCCGGCCGATCCGCTATCTAAAGGCGCTG
GGCTGA
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