mRNA_P-wetherbeei_contig12027.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12027.2.1 vs. uniprot
Match: UPI0019A082B3 (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019A082B3) HSP 1 Score: 402 bits (1032), Expect = 9.560e-138 Identity = 201/312 (64.42%), Postives = 253/312 (81.09%), Query Frame = 1 Query: 40 VACVVHVTGA-WGQAYPARPIRWVAPFPPGGTTDIVARIVAEKLTEALGQQVTLDNRPGAGGNIAAEIVAKAPADGYTVLTGFPGLAINPSLYAKLNYDPLKDLAPVILISSAPLLMVVHPALPARTVKELIAIAKRRPGELSFPSAGNGSSSHLGGELFKSVAGIDIQHVPYKGSMQGMVDLISGRMQLMINPLPEMIPFVESGKLRGIAVAGLKRSSVMPDLPTIAET-LPGFEVTTWNGLMAPAATPKEIVARLNAEIVKLLKAPATMKRMTELGLDTIASTPEQFAEHLRRETDKWAKVVKASGARIE 969 VAC + +TGA Q +P++P+RWVAPF PGGT+DIVAR VA++L+ ALGQ V ++NR GAGGNIAA+ VA+APADGYT+LTGFPGLAINPSLYAKL+YDPLKDLAPV L++SAPL++VV P A+TVKE++A+A +PG L+F SAGNG+SSHL GELFKS+A IDI HVPYKGS++ M DL+ GR+ LMINPLPEMIP V+SGKLRGIAV+ L+RS MPD P ++E+ + G+EV+TWNG+M PA TP ++ RLN EIV LLK+ + + E L I +TPE+F+ LR ET KWA+VVKASGARI+ Sbjct: 8 VACALAITGAAQAQTFPSKPLRWVAPFAPGGTSDIVARAVAQRLSAALGQPVNIENRAGAGGNIAADFVARAPADGYTLLTGFPGLAINPSLYAKLSYDPLKDLAPVTLMTSAPLILVVSPTTSAKTVKEVVALATAQPGTLNFCSAGNGTSSHLAGELFKSMAKIDIVHVPYKGSVECMADLMGGRISLMINPLPEMIPMVKSGKLRGIAVSSLQRSPSMPDTPPVSESGVKGYEVSTWNGVMVPAGTPAAVITRLNGEIVALLKSAELRRSLEEQSLTVIGNTPEEFSAFLRAETAKWAEVVKASGARIQ 319
BLAST of mRNA_P-wetherbeei_contig12027.2.1 vs. uniprot
Match: A0A536UXV9_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A536UXV9_9PROT) HSP 1 Score: 344 bits (882), Expect = 7.460e-115 Identity = 168/311 (54.02%), Postives = 234/311 (75.24%), Query Frame = 1 Query: 43 ACVVHVTGAWGQAYPARPIRWVAPFPPGGTTDIVARIVAEKLTEALGQQVTLDNRPGAGGNIAAEIVAKAPADGYTVLTGFPGL-AINPSLYAKLNYDPLKDLAPVILISSAPLLMVVHPALPARTVKELIAIAKRRPGELSFPSAGNGSSSHLGGELFKSVAGIDIQHVPYKGSMQGMVDLISGRMQLMINPLPEMIPFVESGKLRGIAVAGLKRSSVMPDLPTIAET-LPGFEVTTWNGLMAPAATPKEIVARLNAEIVKLLKAPATMKRMTELGLDTIASTPEQFAEHLRRETDKWAKVVKASGARIE 969 AC+ V A Q YP RPIR V PFP GGTTDI+AR VA+KLTE LGQ V +DNRPGA GNI +++VAK+ DGYT+L G G AINPSLY+K+ YD +KD APV+L++ P ++VV+PALP +V +LI +AK +PG+++F S+G+G+S HL GELFK++AG+D+ HVPYKGS + DLI G++Q+M + LP +P ++ G+LR IAV LKR+ V+PD+PTI E+ LPGFE ++W G++APAATP +VAR+N E+ K L++ +++ G + +PE+FA H+R E++KWAKVVKASGA+++ Sbjct: 19 ACIATVASA--QGYPTRPIRLVVPFPAGGTTDILAREVAQKLTEVLGQAVVVDNRPGAAGNIGSDLVAKSAPDGYTLLMGTVGTHAINPSLYSKMPYDHVKDFAPVVLVAGVPNVLVVNPALPVNSVSDLIKLAKDKPGQINFASSGSGTSIHLSGELFKTMAGVDMTHVPYKGSSPALTDLIGGQVQIMFDNLPSALPQIKGGRLRAIAVTSLKRAPVLPDIPTINESGLPGFEASSWFGVLAPAATPAAVVARINTEVNKWLQSADAREKLLGQGAEAAGGSPERFANHIRAESEKWAKVVKASGAKVD 327
BLAST of mRNA_P-wetherbeei_contig12027.2.1 vs. uniprot
Match: A0A1F4DWR9_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4DWR9_9PROT) HSP 1 Score: 344 bits (882), Expect = 7.710e-115 Identity = 168/300 (56.00%), Postives = 227/300 (75.67%), Query Frame = 1 Query: 76 QAYPARPIRWVAPFPPGGTTDIVARIVAEKLTEALGQQVTLDNRPGAGGNIAAEIVAKAPADGYTVLTG-FPGLAINPSLYAKLNYDPLKDLAPVILISSAPLLMVVHPALPARTVKELIAIAKRRPGELSFPSAGNGSSSHLGGELFKSVAGIDIQHVPYKGSMQGMVDLISGRMQLMINPLPEMIPFVESGKLRGIAVAGLKRSSVMPDLPTIAET-LPGFEVTTWNGLMAPAATPKEIVARLNAEIVKLLKAPATMKRMTELGLDTIASTPEQFAEHLRRETDKWAKVVKASGARIE 969 QAYP +PIR + PFPPGGTTD+VAR+VA+KLTEA GQQV +DNRPGAGG I EIVAKA DGYTVL G A+NP+LY KLN+DP+KD APV L+ S+P L+ VHP++ A++VKELIA+AK +PG+L++ SAG G+S HL ELFKS+AGID+ HVPYKG+ + DLI G++Q+MI + ++P ++SGKLRG+ V KR + +PDLPTIAE+ +PGF+V++W G+ P TPK IVA++NAEI K+L+ P +R+ G D ++TPE+FA +++ E KW KV + +G R + Sbjct: 29 QAYPTKPIRMICPFPPGGTTDVVARLVAQKLTEAWGQQVVVDNRPGAGGIIGTEIVAKAAPDGYTVLLGSITTHAVNPALYKKLNFDPVKDFAPVSLVVSSPQLLAVHPSVAAKSVKELIALAKAKPGQLNYASAGTGTSPHLTFELFKSMAGIDVVHVPYKGTGPAITDLIGGQVQMMITGVVALMPHIKSGKLRGLGVTSAKRVAALPDLPTIAESGIPGFDVSSWFGVFLPGGTPKPIVAKMNAEIRKILEVPEVRQRLISQGADPASNTPEEFAAYVKAEMAKWGKVARDTGTRAD 328
BLAST of mRNA_P-wetherbeei_contig12027.2.1 vs. uniprot
Match: A0A536TWK9_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536TWK9_9PROT) HSP 1 Score: 341 bits (874), Expect = 1.220e-113 Identity = 167/308 (54.22%), Postives = 230/308 (74.68%), Query Frame = 1 Query: 52 VHVTGAWGQAYPARPIRWVAPFPPGGTTDIVARIVAEKLTEALGQQVTLDNRPGAGGNIAAEIVAKAPADGYTVLTGFPGL-AINPSLYAKLNYDPLKDLAPVILISSAPLLMVVHPALPARTVKELIAIAKRRPGELSFPSAGNGSSSHLGGELFKSVAGIDIQHVPYKGSMQGMVDLISGRMQLMINPLPEMIPFVESGKLRGIAVAGLKRSSVMPDLPTIAET-LPGFEVTTWNGLMAPAATPKEIVARLNAEIVKLLKAPATMKRMTELGLDTIASTPEQFAEHLRRETDKWAKVVKASGARIE 969 V V+GAW QAYP RPIR V PFP GGTTDI+AR V ++L+ LGQ V +DNRPGA GNI A++VAK+ DGYT+L G G AIN SLYAK+ YD +KD APVIL++ P ++ V+PALP +V +LI +AK +PG+++F S+G+G+S HL GELFK++AG+D+ HVPYKGS + DLI G++Q+M + LP + F+++GKLR IAV KR+ +PD+PTIAE+ LPGFE ++W G++APA TP I+AR+N ++ + L++ +++ G TPEQFA H+R ET+KWAKVVKASGA+++ Sbjct: 20 VCVSGAWAQAYPTRPIRLVVPFPAGGTTDILAREVGQRLSMTLGQPVVIDNRPGAAGNIGADLVAKSAPDGYTLLMGTVGTHAINASLYAKMPYDHVKDFAPVILVAGVPNVLEVNPALPVNSVADLIKLAKAKPGQINFASSGSGTSIHLSGELFKTMAGVDMTHVPYKGSAPAITDLIGGQVQVMFDNLPSSLQFIKAGKLRAIAVTSAKRAPALPDVPTIAESGLPGFEASSWFGIVAPAGTPPAIIARINNDVDQWLQSSEAKEKLLAQGAIPAGGTPEQFAAHIRAETEKWAKVVKASGAKVD 327
BLAST of mRNA_P-wetherbeei_contig12027.2.1 vs. uniprot
Match: UPI001FAB6256 (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Variovorax sp. CYS-02 TaxID=2923278 RepID=UPI001FAB6256) HSP 1 Score: 341 bits (874), Expect = 1.350e-113 Identity = 162/315 (51.43%), Postives = 230/315 (73.02%), Query Frame = 1 Query: 28 GACAVACVVHVTGAWGQA-YPARPIRWVAPFPPGGTTDIVARIVAEKLTEALGQQVTLDNRPGAGGNIAAEIVAKAPADGYTVLTGFPGLAINPSLYAKLNYDPLKDLAPVILISSAPLLMVVHPALPARTVKELIAIAKRRPGELSFPSAGNGSSSHLGGELFKSVAGIDIQHVPYKGSMQGMVDLISGRMQLMINPLPEMIPFVESGKLRGIAVAGLKRSSVMPDLPTIAETLPGFEVTTWNGLMAPAATPKEIVARLNAEIVKLLKAPATMKRMTELGLDTIASTPEQFAEHLRRETDKWAKVVKASGARIE 969 G C + + GA QA YP++PI+ V PF GGTT I+AR++AE++ + LGQ + +DNRPGAGGN+ ++VAKA DGYT+L G GLAINP+LYAK+ +DPLKDLAPV L + P L+VVHPA+PA VKEL+A AK PG+L++ S GNG+SSHL E+ KS AGIDI HVPYKG M DLI G++ ++ + +P ++P V+ G++R + V+ LKRS+ P++P I+E LPGF++T W G +AP TPK+++ARLNAE+++ LK PA ++ +G+ + S+P++F +R ET +WAKVVK SGA+++ Sbjct: 16 GLCGASLALLAGGAQAQAAYPSKPIKLVVPFAAGGTTSILARLLAERMGQGLGQTIVVDNRPGAGGNVGMDLVAKAEPDGYTILMGPIGLAINPALYAKMPFDPLKDLAPVGLYAGVPNLLVVHPAVPAANVKELVAYAKAHPGKLNYASNGNGTSSHLAAEMLKSAAGIDITHVPYKGGGPAMQDLIGGQVNMLFDQMPAVLPQVQGGRVRALGVSSLKRSAAAPEIPAISEALPGFDMTVWFGFLAPRGTPKDVIARLNAEMLRALKEPAFQAQLASMGVTPMPSSPDEFGSFMRSETTRWAKVVKDSGAKLD 330
BLAST of mRNA_P-wetherbeei_contig12027.2.1 vs. uniprot
Match: A0A1F6VI37_9PROT (Uncharacterized protein n=1 Tax=Candidatus Muproteobacteria bacterium RBG_16_60_9 TaxID=1817755 RepID=A0A1F6VI37_9PROT) HSP 1 Score: 339 bits (869), Expect = 7.220e-113 Identity = 164/300 (54.67%), Postives = 225/300 (75.00%), Query Frame = 1 Query: 76 QAYPARPIRWVAPFPPGGTTDIVARIVAEKLTEALGQQVTLDNRPGAGGNIAAEIVAKAPADGYTVLTGFPGL-AINPSLYAKLNYDPLKDLAPVILISSAPLLMVVHPALPARTVKELIAIAKRRPGELSFPSAGNGSSSHLGGELFKSVAGIDIQHVPYKGSMQGMVDLISGRMQLMINPLPEMIPFVESGKLRGIAVAGLKRSSVMPDLPTIAET-LPGFEVTTWNGLMAPAATPKEIVARLNAEIVKLLKAPATMKRMTELGLDTIASTPEQFAEHLRRETDKWAKVVKASGARIE 969 AYP++ IR V PF GGTTDI+AR + +KL+E GQQV +DNR GAGGNI A++VAK+ DGYT+L G G AINPSLYAK+ +D LKD P+ +++ ++VVHP++PA++V ELIA+AK +PG+L+F S+GNG+S HL GELFK++ G+D+ H+PYKGS + DL+ G++ LM + LP +P +++GKLR + V KR+ +PD PTIAE +PGFE T+W G+ APA TPKE+VARL+ EIVK L +P T +R++ G D I +TPEQFA ++ ET KWAKVVKASGA+++ Sbjct: 29 DAYPSKSIRMVVPFNAGGTTDILARAIGQKLSEVFGQQVVVDNRAGAGGNIGADVVAKSAPDGYTLLMGTVGTHAINPSLYAKMPFDHLKDFVPITQVAAVSNVLVVHPSVPAKSVAELIALAKAKPGKLNFASSGNGTSIHLSGELFKTLTGVDMVHIPYKGSAPAITDLLGGQVNLMFDNLPSALPHIKTGKLRALGVTSSKRAPALPDAPTIAEAGVPGFEATSWFGVFAPAGTPKEVVARLHKEIVKALNSPDTKERLSGQGADLIGNTPEQFAAYIAAETTKWAKVVKASGAKVD 328
BLAST of mRNA_P-wetherbeei_contig12027.2.1 vs. uniprot
Match: A0A6N9R4T9_9RHOO (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Aromatoleum sp. TaxID=2307007 RepID=A0A6N9R4T9_9RHOO) HSP 1 Score: 338 bits (868), Expect = 1.020e-112 Identity = 174/322 (54.04%), Postives = 230/322 (71.43%), Query Frame = 1 Query: 10 KLITVVGACAVACVVHVTGAWGQAYPARPIRWVAPFPPGGTTDIVARIVAEKLTEALGQQVTLDNRPGAGGNIAAEIVAKAPADGYTVLTGFPGL-AINPSLYAKLNYDPLKDLAPVILISSAPLLMVVHPALPARTVKELIAIAKRRPGELSFPSAGNGSSSHLGGELFKSVAGIDIQHVPYKGSMQGMVDLISGRMQLMINPLPEMIPFVESGKLRGIAVAGLKRSSVMPDLPTIAET-LPGFEVTTWNGLMAPAATPKEIVARLNAEIVKLLKAPATMKRMTELGLDTIASTPEQFAEHLRRETDKWAKVVKASGARIE 969 + +T A A + V GA AYP++PIR V PFP GGTTDI+AR VA+KLTEA GQ V +DNRPGAGGNI +E+VAKA ADGYT+ G G AINPSLYAK+ YD +KD APVIL++ P ++VV+P +P +V ELIA AK PG+L+F S+G+G+S HL GELFK ++G D+ HVPYKGS + DLI G++QLM + LP +P + +GKLR +AV R++ +PD PTIAE+ LPGFE ++W G++APA T IV++LNAEI K L +P ++M G + +PE FA H++ ET KWAKVVK SGA+++ Sbjct: 7 RALTGFAAAAALSLTSVAGAQTPAYPSKPIRLVVPFPAGGTTDILARAVAQKLTEAWGQPVVVDNRPGAGGNIGSELVAKAAADGYTLEMGTVGTHAINPSLYAKMPYDHVKDFAPVILVAGVPNVLVVNPGVPVHSVAELIAYAKTHPGKLNFASSGSGTSIHLSGELFKVMSGADMMHVPYKGSAPALADLIGGQVQLMFDNLPSSLPQIRAGKLRALAVTSGTRAAALPDTPTIAESGLPGFEASSWFGVLAPAGTSPAIVSKLNAEIAKWLASPEAKEKMQSQGANAAGGSPEDFARHIQAETAKWAKVVKDSGAKVD 328
BLAST of mRNA_P-wetherbeei_contig12027.2.1 vs. uniprot
Match: A0A1F4DTI3_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4DTI3_9PROT) HSP 1 Score: 338 bits (867), Expect = 1.190e-112 Identity = 170/313 (54.31%), Postives = 224/313 (71.57%), Query Frame = 1 Query: 37 AVACVVHVTGAWGQAYPARPIRWVAPFPPGGTTDIVARIVAEKLTEALGQQVTLDNRPGAGGNIAAEIVAKAPADGYTVLTGFPGL-AINPSLYAKLNYDPLKDLAPVILISSAPLLMVVHPALPARTVKELIAIAKRRPGELSFPSAGNGSSSHLGGELFKSVAGIDIQHVPYKGSMQGMVDLISGRMQLMINPLPEMIPFVESGKLRGIAVAGLKRSSVMPDLPTIAET-LPGFEVTTWNGLMAPAATPKEIVARLNAEIVKLLKAPATMKRMTELGLDTIASTPEQFAEHLRRETDKWAKVVKASGARIE 969 AV + + A QAYP +P+R V PFP GG TDIV R++A+KL+E+ GQQV +DNR GAGG I ++I AK+ DGYT+L G AI PSLY+KL YDP++D APV L++SA +L+ VHP++PA+ V++LIA+AKR+P LSF S+GNG SHL GE FKSV GI + HVPYKG +VDL+SG++ LM +P+V++G+L +AV KRS + PD+PT+AE+ LPGFE W G+ PA KEIVARLN EIVK+++ P +RMT LG D + STPEQFA + +T KWA+VVK SGA+IE Sbjct: 10 AVLLAIASSAAVAQAYPVKPVRMVVPFPAGGATDIVGRLIAQKLSESWGQQVIVDNRGGAGGTIGSDIAAKSAPDGYTMLVGTSSTHAIAPSLYSKLPYDPVRDFAPVTLVASATILLAVHPSVPAKNVRDLIALAKRKPNALSFASSGNGGISHLIGEHFKSVGGIQMLHVPYKGDTPALVDLVSGQVHLMFGTAVSFLPYVKAGRLNALAVTNPKRSPIAPDVPTVAESGLPGFEALQWFGIFVPAGASKEIVARLNGEIVKIVRLPDIRERMTSLGADVVGSTPEQFAAFQKTDTAKWARVVKESGAKIE 322
BLAST of mRNA_P-wetherbeei_contig12027.2.1 vs. uniprot
Match: A0A536XPA0_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=5 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536XPA0_9PROT) HSP 1 Score: 337 bits (865), Expect = 2.730e-112 Identity = 164/300 (54.67%), Postives = 224/300 (74.67%), Query Frame = 1 Query: 76 QAYPARPIRWVAPFPPGGTTDIVARIVAEKLTEALGQQVTLDNRPGAGGNIAAEIVAKAPADGYTVLTGFPG-LAINPSLYAKLNYDPLKDLAPVILISSAPLLMVVHPALPARTVKELIAIAKRRPGELSFPSAGNGSSSHLGGELFKSVAGIDIQHVPYKGSMQGMVDLISGRMQLMINPLPEMIPFVESGKLRGIAVAGLKRSSVMPDLPTIAE-TLPGFEVTTWNGLMAPAATPKEIVARLNAEIVKLLKAPATMKRMTELGLDTIASTPEQFAEHLRRETDKWAKVVKASGARIE 969 AYP++P+R+V FPPGG TDI+AR +A++LT L QQV +DNRPGAGGNI +IVAK+ DG+T+L G G LAIN SL+ K+ +DP++DLAPV L +S P ++VVHP+L A TV+ELIA+AK RPGE++F S+G+G+ +HL GELF S+AG+ + HVPYKG+ + DL+ G++QLM + +P +P V+ GKLR +AV KRS P+LPT+ E LPGFE TW+G++ PA TP IVARLN EIV +L P ++R++ G + + STPE+FA ++R ET KWAKVV+ SGA+ E Sbjct: 27 DAYPSKPVRFVVAFPPGGGTDIIARSIAQRLTVRLAQQVVVDNRPGAGGNIGTDIVAKSAPDGHTLLMGSAGPLAINASLFGKMPFDPIRDLAPVTLAASTPNVLVVHPSLRAATVRELIALAKARPGEINFASSGHGTPAHLAGELFNSMAGVKMVHVPYKGAAPALADLLGGQVQLMFSTMPPALPHVKDGKLRALAVTSAKRSPATPELPTVDEIALPGFEANTWHGVVVPAGTPAAIVARLNREIVAILHLPEVVERLSAQGAEAVGSTPEEFAAYIRSETAKWAKVVRDSGAKAE 326
BLAST of mRNA_P-wetherbeei_contig12027.2.1 vs. uniprot
Match: A0A536Y8U6_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=3 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536Y8U6_9PROT) HSP 1 Score: 335 bits (859), Expect = 2.140e-111 Identity = 164/300 (54.67%), Postives = 221/300 (73.67%), Query Frame = 1 Query: 76 QAYPARPIRWVAPFPPGGTTDIVARIVAEKLTEALGQQVTLDNRPGAGGNIAAEIVAKAPADGYTVLTGFPG-LAINPSLYAKLNYDPLKDLAPVILISSAPLLMVVHPALPARTVKELIAIAKRRPGELSFPSAGNGSSSHLGGELFKSVAGIDIQHVPYKGSMQGMVDLISGRMQLMINPLPEMIPFVESGKLRGIAVAGLKRSSVMPDLPTIAE-TLPGFEVTTWNGLMAPAATPKEIVARLNAEIVKLLKAPATMKRMTELGLDTIASTPEQFAEHLRRETDKWAKVVKASGARIE 969 +AYPA+P+R+V FPPGG TDI+AR +A+KL E + QQV +DNRPGAGGNI ++VAK+ DGYT+L G G LAIN SL+ K+ +DP+KDLAPV L +S P L+VVHP+L +VKELIA+AK RPGE+ F S+G+G+ +HL GELF S+AG+ + HVPYKG+ + DL+ G++QLM + +P +P V+ GKLR +AV KRS P+LPT+ E L GFE TW+G++ PA TP IVARLN EIV +L P ++R + G + + STPE+FA +++ ET KWAKVV+ SGA+ E Sbjct: 26 EAYPAKPVRFVVAFPPGGGTDIIARSIAQKLAERIAQQVVVDNRPGAGGNIGTDMVAKSAPDGYTLLMGSAGPLAINASLFGKMPFDPIKDLAPVTLAASTPNLLVVHPSLRVASVKELIALAKARPGEIDFASSGHGTPAHLAGELFNSMAGVKMVHVPYKGAAPALADLLGGQVQLMFSTMPPALPHVKDGKLRALAVTSAKRSPAAPELPTVGEIALRGFEANTWHGVVVPAGTPGAIVARLNREIVAILHLPDVVERFSSQGAEALGSTPEEFAAYIKSETLKWAKVVRDSGAKAE 325 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12027.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12027.2.1 >prot_P-wetherbeei_contig12027.2.1 ID=prot_P-wetherbeei_contig12027.2.1|Name=mRNA_P-wetherbeei_contig12027.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=324bp MRVKLITVVGACAVACVVHVTGAWGQAYPARPIRWVAPFPPGGTTDIVARback to top mRNA from alignment at P-wetherbeei_contig12027:872..1843+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12027.2.1 ID=mRNA_P-wetherbeei_contig12027.2.1|Name=mRNA_P-wetherbeei_contig12027.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=972bp|location=Sequence derived from alignment at P-wetherbeei_contig12027:872..1843+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12027:872..1843+ >mRNA_P-wetherbeei_contig12027.2.1 ID=mRNA_P-wetherbeei_contig12027.2.1|Name=mRNA_P-wetherbeei_contig12027.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=972bp|location=Sequence derived from alignment at P-wetherbeei_contig12027:872..1843+ (Phaeothamnion wetherbeei SAG_119_79)back to top |