Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 2352 |
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Cds size | 1929 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683185849.0151916-UTR-P-wetherbeei_contig100:2180..2196 | 1683185849.0151916-UTR-P-wetherbeei_contig100:2180..2196 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig100 2181..2196 + |
| 1683185849.0359366-UTR-P-wetherbeei_contig100:4125..4532 | 1683185849.0359366-UTR-P-wetherbeei_contig100:4125..4532 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig100 4126..4532 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683185849.025991-CDS-P-wetherbeei_contig100:2196..4125 | 1683185849.025991-CDS-P-wetherbeei_contig100:2196..4125 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig100 2197..4125 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig100.1.1 >prot_P-wetherbeei_contig100.1.1 ID=prot_P-wetherbeei_contig100.1.1|Name=mRNA_P-wetherbeei_contig100.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=643bp
MPNLRAARSRNMSGQKSWRFPFGGANATAATGGGSGGGAGGGGGDPEVEG
SGPSSRSPVLSPREQAEAILGPLVLPRTLPSRLVKPWLQQPAAAVTAAAA
ADQRAAKERGASAGGGVVGSDGCGGGSDSRGSGVTGSRDSGSCGGAGPPP
MEEIAAVAAAAAGDLTGASPPYPMVPASRSFSPGGRRSGSASVASAGGPL
VLLGGALTNGALASISGRDGGGGSNGGGGGAGTGGWEAFSDNNGGGSSPL
HEGDNASTLSNTSTAITDLSMRLDKIEELLIRLLNAGGGGGRVLQRSVGG
GSGSGGGDGGGTGATSGGGSRTALLAAAAVALLEDDAASLAGATVPTDRP
DPGTASRRGSSGTLPLPDPPRGSCGNGRSGGDVRRISGGDRSSGAYGSGA
GPGGGRDDPRSADVGGGGGGGGSDLDPEVFLWDTFQEVQQVRAQLAHLGA
LQHPAWGGRVAHGAAMAANAPSRSGAGAAGGGGDHRSAEGGGGGSGGTGE
VKGGREEVFSAAAAAVAAVVAEPGEARETREASTGSARSGGGDADDGERS
TASAGARSWWFLRRAIAKKQEPQPSTAAGIGAVAADIGGRMTVDGGSGGG
DGGGGSGDDDTLAGPEAGFPAVGHTGGLSCIEEAAEAEHGAA* back to topmRNA from alignment at P-wetherbeei_contig100:2181..4532+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig100.1.1 ID=mRNA_P-wetherbeei_contig100.1.1|Name=mRNA_P-wetherbeei_contig100.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2352bp|location=Sequence derived from alignment at P-wetherbeei_contig100:2181..4532+ (Phaeothamnion wetherbeei SAG_119_79)
GGGACTGCGGCTGCTCATGCCGAACCTTCGCGCGGCCCGTTCACGCAACA
TGTCTGGTCAGAAGTCGTGGCGCTTCCCATTCGGCGGGGCGAATGCCACT
GCGGCCACCGGCGGTGGTAGCGGCGGCGGCGCCGGCGGCGGCGGCGGCGA
CCCCGAAGTGGAGGGGAGCGGCCCATCTTCCAGATCGCCGGTGCTGAGCC
CGAGAGAGCAGGCCGAGGCGATACTGGGGCCGCTGGTGCTGCCGCGGACG
CTGCCGTCGCGGCTGGTCAAGCCGTGGCTGCAGCAGCCGGCCGCCGCTGT
CACTGCGGCTGCCGCCGCTGATCAAAGGGCGGCAAAGGAAAGAGGCGCTT
CTGCGGGCGGCGGAGTAGTTGGCAGCGACGGCTGCGGTGGCGGCAGTGAC
AGCAGGGGCAGTGGCGTGACTGGCAGCAGGGACAGCGGCAGCTGCGGCGG
TGCAGGACCCCCGCCGATGGAAGAAATCGCAGCCGTGGCGGCTGCGGCGG
CAGGGGACCTCACCGGAGCGAGCCCACCTTACCCCATGGTGCCTGCCAGC
CGCAGTTTCAGTCCGGGTGGCCGTCGGAGCGGCAGCGCCAGCGTCGCCTC
TGCCGGCGGTCCGCTGGTGCTGTTGGGCGGGGCGCTCACGAACGGCGCGT
TGGCGAGCATCTCTGGCCGGGATGGTGGTGGTGGCAGCAACGGCGGCGGC
GGCGGCGCCGGCACAGGCGGCTGGGAAGCCTTCTCAGACAACAACGGTGG
CGGTTCATCGCCGCTCCACGAGGGGGATAACGCGTCTACGCTCTCCAACA
CGTCGACGGCGATCACAGACCTCTCGATGCGCCTCGACAAAATCGAGGAG
CTGCTGATCAGGCTGCTGAATGCTGGCGGCGGCGGCGGCAGAGTGCTGCA
GCGCAGCGTAGGTGGTGGGAGCGGCAGCGGTGGTGGCGACGGCGGCGGTA
CTGGAGCGACGAGCGGTGGAGGCAGTCGCACAGCGCTGTTGGCTGCGGCG
GCGGTGGCCCTGCTGGAAGACGACGCCGCGTCCCTTGCCGGGGCGACGGT
GCCGACGGACCGCCCTGACCCCGGAACGGCCAGCCGGAGGGGCAGCAGTG
GGACGTTGCCGCTGCCTGATCCGCCGAGAGGCAGTTGCGGCAACGGCAGA
AGCGGTGGCGACGTGCGACGCATCAGCGGTGGCGACCGCAGTAGCGGCGC
CTATGGCAGTGGTGCTGGCCCCGGCGGCGGACGCGATGACCCCAGGAGTG
CAGACGTCGGCGGCGGCGGCGGCGGCGGTGGTAGCGACCTCGACCCAGAA
GTGTTCTTGTGGGACACGTTTCAAGAAGTTCAACAGGTTCGAGCGCAGCT
GGCACATCTCGGAGCGCTCCAGCACCCGGCGTGGGGAGGTCGGGTGGCGC
ACGGCGCCGCAATGGCGGCAAATGCGCCGAGCAGAAGCGGCGCCGGAGCC
GCTGGTGGCGGCGGTGACCACAGGAGTGCAGAGGGCGGCGGCGGCGGCAG
CGGCGGCACTGGAGAGGTAAAGGGTGGCCGAGAAGAGGTTTTCTCCGCCG
CTGCTGCCGCCGTGGCAGCAGTCGTGGCCGAGCCGGGAGAGGCTCGTGAG
ACGAGAGAGGCATCGACGGGATCGGCGCGCAGCGGCGGTGGCGACGCGGA
CGACGGCGAACGGAGCACCGCATCGGCCGGCGCGCGATCGTGGTGGTTTC
TGCGACGGGCCATCGCCAAGAAGCAAGAGCCGCAGCCATCGACTGCAGCC
GGCATTGGTGCCGTTGCGGCAGACATCGGCGGCCGTATGACTGTTGACGG
CGGCAGTGGTGGCGGCGATGGCGGCGGTGGAAGCGGCGACGATGATACGC
TCGCTGGGCCAGAGGCAGGGTTTCCGGCCGTGGGCCACACTGGCGGGCTG
TCCTGCATCGAGGAGGCGGCAGAGGCGGAACACGGAGCTGCGTAGCGGCA
AGCACCGGTGCCCCTTTGCTGTTTGGGGTGGTCGTCAAAGCGGCGGTCTG
CTTTTTGGGGGTTCGAAAGATTGGGAAGATTTGGGCGGGATACATTTTTG
GAAAATACGCCTCTGTAACTGTGTGTACAGAAGGGAAGGGTACCATTTGG
TCCCGCGGTGGCGGTGGCGCGCGCGGTGGCGCTCTCCTCCGACGTGGGCT
TCTCCCGCGCTGCGGCGACGGCGATGGTTGTGCGTCCGGCACGAGGACGA
GAAAGAAAGAGGAAAGATTGAAGAGAGAGAAAATTGATTGATTGACCCGC
CTGGCTGGCCGTTGGAATGCCGGCGGGCGGGGGGAGAGACCACGGCAACA
CAAACATCATACTTGGACTGAATCCCTTAAAAACAGTTTGCAACCTGCGT
CC back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig100:2181..4532+ >mRNA_P-wetherbeei_contig100.1.1 ID=mRNA_P-wetherbeei_contig100.1.1|Name=mRNA_P-wetherbeei_contig100.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1929bp|location=Sequence derived from alignment at P-wetherbeei_contig100:2181..4532+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGAACCTTCGCGCGGCCCGTTCACGCAACATGTCTGGTCAGAAGTC
GTGGCGCTTCCCATTCGGCGGGGCGAATGCCACTGCGGCCACCGGCGGTG
GTAGCGGCGGCGGCGCCGGCGGCGGCGGCGGCGACCCCGAAGTGGAGGGG
AGCGGCCCATCTTCCAGATCGCCGGTGCTGAGCCCGAGAGAGCAGGCCGA
GGCGATACTGGGGCCGCTGGTGCTGCCGCGGACGCTGCCGTCGCGGCTGG
TCAAGCCGTGGCTGCAGCAGCCGGCCGCCGCTGTCACTGCGGCTGCCGCC
GCTGATCAAAGGGCGGCAAAGGAAAGAGGCGCTTCTGCGGGCGGCGGAGT
AGTTGGCAGCGACGGCTGCGGTGGCGGCAGTGACAGCAGGGGCAGTGGCG
TGACTGGCAGCAGGGACAGCGGCAGCTGCGGCGGTGCAGGACCCCCGCCG
ATGGAAGAAATCGCAGCCGTGGCGGCTGCGGCGGCAGGGGACCTCACCGG
AGCGAGCCCACCTTACCCCATGGTGCCTGCCAGCCGCAGTTTCAGTCCGG
GTGGCCGTCGGAGCGGCAGCGCCAGCGTCGCCTCTGCCGGCGGTCCGCTG
GTGCTGTTGGGCGGGGCGCTCACGAACGGCGCGTTGGCGAGCATCTCTGG
CCGGGATGGTGGTGGTGGCAGCAACGGCGGCGGCGGCGGCGCCGGCACAG
GCGGCTGGGAAGCCTTCTCAGACAACAACGGTGGCGGTTCATCGCCGCTC
CACGAGGGGGATAACGCGTCTACGCTCTCCAACACGTCGACGGCGATCAC
AGACCTCTCGATGCGCCTCGACAAAATCGAGGAGCTGCTGATCAGGCTGC
TGAATGCTGGCGGCGGCGGCGGCAGAGTGCTGCAGCGCAGCGTAGGTGGT
GGGAGCGGCAGCGGTGGTGGCGACGGCGGCGGTACTGGAGCGACGAGCGG
TGGAGGCAGTCGCACAGCGCTGTTGGCTGCGGCGGCGGTGGCCCTGCTGG
AAGACGACGCCGCGTCCCTTGCCGGGGCGACGGTGCCGACGGACCGCCCT
GACCCCGGAACGGCCAGCCGGAGGGGCAGCAGTGGGACGTTGCCGCTGCC
TGATCCGCCGAGAGGCAGTTGCGGCAACGGCAGAAGCGGTGGCGACGTGC
GACGCATCAGCGGTGGCGACCGCAGTAGCGGCGCCTATGGCAGTGGTGCT
GGCCCCGGCGGCGGACGCGATGACCCCAGGAGTGCAGACGTCGGCGGCGG
CGGCGGCGGCGGTGGTAGCGACCTCGACCCAGAAGTGTTCTTGTGGGACA
CGTTTCAAGAAGTTCAACAGGTTCGAGCGCAGCTGGCACATCTCGGAGCG
CTCCAGCACCCGGCGTGGGGAGGTCGGGTGGCGCACGGCGCCGCAATGGC
GGCAAATGCGCCGAGCAGAAGCGGCGCCGGAGCCGCTGGTGGCGGCGGTG
ACCACAGGAGTGCAGAGGGCGGCGGCGGCGGCAGCGGCGGCACTGGAGAG
GTAAAGGGTGGCCGAGAAGAGGTTTTCTCCGCCGCTGCTGCCGCCGTGGC
AGCAGTCGTGGCCGAGCCGGGAGAGGCTCGTGAGACGAGAGAGGCATCGA
CGGGATCGGCGCGCAGCGGCGGTGGCGACGCGGACGACGGCGAACGGAGC
ACCGCATCGGCCGGCGCGCGATCGTGGTGGTTTCTGCGACGGGCCATCGC
CAAGAAGCAAGAGCCGCAGCCATCGACTGCAGCCGGCATTGGTGCCGTTG
CGGCAGACATCGGCGGCCGTATGACTGTTGACGGCGGCAGTGGTGGCGGC
GATGGCGGCGGTGGAAGCGGCGACGATGATACGCTCGCTGGGCCAGAGGC
AGGGTTTCCGGCCGTGGGCCACACTGGCGGGCTGTCCTGCATCGAGGAGG
CGGCAGAGGCGGAACACGGAGCTGCGTAG back to top
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