prot_P-wetherbeei_contig11982.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig11982.1.1
Unique Nameprot_P-wetherbeei_contig11982.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length191
Homology
BLAST of mRNA_P-wetherbeei_contig11982.1.1 vs. uniprot
Match: A0A836CKS6_9STRA (RNA helicase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKS6_9STRA)

HSP 1 Score: 265 bits (678), Expect = 1.180e-82
Identity = 142/196 (72.45%), Postives = 163/196 (83.16%), Query Frame = 0
Query:    1 GSRAIVFAQTKKECDELAAGNAFKTLSSQVLHGDIGQKQRDVTINQFRKGQFHVLVATDVAARGIDIADVDLVVQYRPPPDPDTYVHRSGRTGRAGREGTAVTLFSSDEQRDIVRIERAIGKGFRC-RGSVPSAEAVMAQSATVALKAIDAVGDAVVPYFMDSARKLLASEAA----ADTELLLAKCLAAISRKSE 191
            GSRAIVF QTK+ECDELAAGNAFKTLSSQVLHGDIGQ QR+VTI QFRKGQF VLVATDVAARGIDI+++DLVVQYRPP DPDTYVHRSGRTGRAGR GT VTLF+ +E+RD+ +IE+AIGKGF+  R +VPSA  VM  +  VALKA+D V   VVP+F  +AR+LLA   A     DTE LLA+CLAAI+RK+E
Sbjct:  304 GSRAIVFTQTKRECDELAAGNAFKTLSSQVLHGDIGQNQREVTIGQFRKGQFQVLVATDVAARGIDISEIDLVVQYRPPTDPDTYVHRSGRTGRAGRLGTCVTLFADNERRDVQKIEKAIGKGFKFERAAVPSATQVMEVAGKVALKALDTVSADVVPFFTPAARELLAESQADGAELDTEQLLARCLAAIARKTE 499          
BLAST of mRNA_P-wetherbeei_contig11982.1.1 vs. uniprot
Match: D8LE98_ECTSI (RNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE98_ECTSI)

HSP 1 Score: 237 bits (605), Expect = 7.720e-70
Identity = 126/191 (65.97%), Postives = 151/191 (79.06%), Query Frame = 0
Query:    1 GSRAIVFAQTKKECDELAAGNAFKTLSSQVLHGDIGQKQRDVTINQFRKGQFHVLVATDVAARGIDIADVDLVVQYRPPPDPDTYVHRSGRTGRAGREGTAVTLFSSDEQRDIVRIERAIGKGFRC-RGSVPSAEAVMAQSATVALKAIDAVGDAVVPYFMDSARKLLASEAAADTELLLAKCLAAISRKS 190
            GS AIVF  +K ECDELA G  FKTL+SQVLHGDI Q QRD TI  FR   F VLVATDVAARGID++D+DLVVQYRPP DPD+YVHRSGRTGRAGR G AVTL++ +E RDI +IE+ +G+GFR  RG+VPSAE VM+ + TVA + I  V D +V +F +SA++LLA E + D ELLLAKCLAAI+RK+
Sbjct:  509 GSHAIVFTNSKAECDELADGQTFKTLTSQVLHGDISQHQRDQTIKAFRAKGFQVLVATDVAARGIDVSDIDLVVQYRPPRDPDSYVHRSGRTGRAGRPGVAVTLYAENEIRDIRKIEQGVGQGFRFERGAVPSAEQVMSLAGTVAREQIKGVSDDMVDFFRESAQELLAEEESEDKELLLAKCLAAIARKT 699          
BLAST of mRNA_P-wetherbeei_contig11982.1.1 vs. uniprot
Match: A0A835ZP19_9STRA (RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZP19_9STRA)

HSP 1 Score: 212 bits (539), Expect = 3.310e-61
Identity = 112/172 (65.12%), Postives = 137/172 (79.65%), Query Frame = 0
Query:   25 TLSSQVLHGDIGQKQRDVTINQFRKGQFHVLVATDVAARGIDIADVDLVVQYRPPPDPDTYVHRSGRTGRAGREGTAVTLFSSDEQRDIVRIERAIGKGFRC-RGSVPSAEAVMAQSATVALKAIDAVGDAVVPYFMDSARKLLA----SEAAADTELLLAKCLAAISRKSE 191
            T + QVLHGDIGQ QR+VTI QFRK QF VLVATDVAARGIDI+++DLVVQYRPP DPDTYVHRSGRTGRAGR G  VTL++ +E+RD+ +IERA+GKGF+  R  VPS   VM  + TVALK++ AV + VVP+F  +A++L+A    SE   DTE LLA+CLAAI+RK+E
Sbjct:  373 TYAVQVLHGDIGQNQREVTIGQFRKSQFQVLVATDVAARGIDISEIDLVVQYRPPTDPDTYVHRSGRTGRAGRSGVCVTLYADNERRDMQKIERAVGKGFKFERAPVPSPAQVMEVAGTVALKSLTAVSEEVVPFFSSAAKELIAESTASEGGLDTEKLLARCLAAIARKTE 544          
BLAST of mRNA_P-wetherbeei_contig11982.1.1 vs. uniprot
Match: A0A7S2KUG8_9STRA (RNA helicase (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KUG8_9STRA)

HSP 1 Score: 200 bits (508), Expect = 1.420e-59
Identity = 107/189 (56.61%), Postives = 137/189 (72.49%), Query Frame = 0
Query:    3 RAIVFAQTKKECDELAAGNAFKTLSSQVLHGDIGQKQRDVTINQFRKGQFHVLVATDVAARGIDIADVDLVVQYRPPPDPDTYVHRSGRTGRAGREGTAVTLFSSDEQRDIVRIERAIGKGFRCRG-SVPSAEAVMAQSATVALKAIDAVGDAVVPYFMDSARKLLASEAAADTELLLAKCLAAISRKS 190
            + IVF +TK ECDEL +G+ FKTL++Q +HGDIGQKQR+ T+  FR G F+VLVATDVAARGIDI DVDLV+Q+ PP D DTYVHRSGRTGRAG +G +V LF  ++ RDIVRIER++G GF+      PS EA +  +A  +  A   V D    +F ++AR LLA+  A DT   +A+CLAAISR++
Sbjct:   13 KTIVFTETKAECDELVSGSVFKTLTAQAIHGDIGQKQREATLAAFRAGAFNVLVATDVAARGIDIKDVDLVIQFHPPRDDDTYVHRSGRTGRAGAKGISVLLFQQNQARDIVRIERSLGHGFKFELLGPPSIEAALNAAAKTSAIACKTVADETAEHFKEAARALLANGDAEDT---VARCLAAISRRT 198          
BLAST of mRNA_P-wetherbeei_contig11982.1.1 vs. uniprot
Match: A0A7S1B3X5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B3X5_9STRA)

HSP 1 Score: 202 bits (515), Expect = 1.240e-57
Identity = 110/190 (57.89%), Postives = 138/190 (72.63%), Query Frame = 0
Query:    3 RAIVFAQTKKECDELAAGNAFKTLSSQVLHGDIGQKQRDVTINQFRKGQFHVLVATDVAARGIDIADVDLVVQYRPPPDPDTYVHRSGRTGRAGREGTAVTLFSSDEQRDIVRIERAIGKGFRCR--GSVPSAEAVMAQSATVALKAIDAVGDAVVPYFMDSARKLLASEAAADTELLLAKCLAAISRKS 190
            + IVF QTK++ DEL +G  FK+L++Q LHGD+GQKQRD T+N FR G F+VLVATDVAARGIDI DVDLV+QY PP D DTYVHRSGRTGRAGR+GT+V LF   + RDIVRIE+++G GF+    G   SA  + A + T AL A   V +    YF +SA  LL +E+  D   ++A+CLAAISR+S
Sbjct:  408 KTIVFTQTKRDADELVSGGVFKSLTAQALHGDVGQKQRDATLNAFRAGSFNVLVATDVAARGIDIQDVDLVIQYEPPRDTDTYVHRSGRTGRAGRKGTSVLLFEPKQGRDIVRIEKSLGHGFQFELVGPPTSAATLRAAAKTSAL-ACSGVNEETAEYFRESASNLL-NESGMDAVDIVARCLAAISRRS 595          
BLAST of mRNA_P-wetherbeei_contig11982.1.1 vs. uniprot
Match: B8BZG6_THAPS (RNA helicase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZG6_THAPS)

HSP 1 Score: 196 bits (499), Expect = 1.460e-57
Identity = 106/189 (56.08%), Postives = 135/189 (71.43%), Query Frame = 0
Query:    3 RAIVFAQTKKECDELAAGNAFKTLSSQVLHGDIGQKQRDVTINQFRKGQFHVLVATDVAARGIDIADVDLVVQYRPPPDPDTYVHRSGRTGRAGREGTAVTLFSSDEQRDIVRIERAIGKGFRCRG-SVPSAEAVMAQSATVALKAIDAVGDAVVPYFMDSARKLLASEAAADTELLLAKCLAAISRKS 190
            + IVF +TKKE DEL +G+ FKTLS+Q +HGDIGQKQRD T+  FR G F+VLVATDVAARGIDI DVDLV+Q+ PP D DTYVHRSGRTGRAG  G +V LF  ++ RDIVRIE+++G GF+      PS EA +  +A  +  A   V D    +F D+A  LLAS  +   E ++A+CLAAI+R++
Sbjct:  252 KTIVFTETKKEADELVSGSVFKTLSAQAIHGDIGQKQRDATLAAFRAGAFNVLVATDVAARGIDIKDVDLVIQFEPPRDVDTYVHRSGRTGRAGASGISVLLFQQNQARDIVRIEKSLGHGFKFELLGPPSTEAALNAAAKTSALACRGVADETAAHFKDAAVSLLASSGS--PEDVVARCLAAIARRT 438          
BLAST of mRNA_P-wetherbeei_contig11982.1.1 vs. uniprot
Match: A0A7S3ZWQ0_9STRA (RNA helicase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZWQ0_9STRA)

HSP 1 Score: 202 bits (513), Expect = 1.760e-57
Identity = 109/194 (56.19%), Postives = 143/194 (73.71%), Query Frame = 0
Query:    1 GSRAIVFAQTKKECDELAAGNAFKTLSSQVLHGDIGQKQRDVTINQFRKGQFHVLVATDVAARGIDIADVDLVVQYRPPPDPDTYVHRSGRTGRAGREGTAVTLFSSDEQRDIVRIERAIGKGFRCRGSVPSAEAVMAQSATVALKAIDAVGDAVVPYFMDSARKLLASEAAADTE---LLLAKCLAAISRKSE 191
            G R IVF  TK+ECDELA G AF+ LS+QVLHGDIGQ QR+ T+ QFR+GQF VLVATDVAARGID+  VDLVVQ+R P D + YVHRSGRTGRAGR+GTAV L+   E+RD+  +ER  G  F+  G  PSA  V+  ++  A +A+  V D VVP+F+++A++L A E A  ++    L+A+CLAA++R++E
Sbjct:  389 GGRVIVFTATKRECDELAGGPAFQRLSAQVLHGDIGQSQREATLAQFRRGQFSVLVATDVAARGIDVKGVDLVVQFRTPRDAEGYVHRSGRTGRAGRDGTAVVLYDDREERDVRSLERETGVKFQRLGP-PSAGRVLEAASLDAARALTRVQDDVVPHFLETAKQLCADELAETSDEAASLVARCLAAVARQNE 581          
BLAST of mRNA_P-wetherbeei_contig11982.1.1 vs. uniprot
Match: A0A7S2H5C4_9STRA (RNA helicase (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H5C4_9STRA)

HSP 1 Score: 198 bits (504), Expect = 4.590e-56
Identity = 105/189 (55.56%), Postives = 136/189 (71.96%), Query Frame = 0
Query:    3 RAIVFAQTKKECDELAAGNAFKTLSSQVLHGDIGQKQRDVTINQFRKGQFHVLVATDVAARGIDIADVDLVVQYRPPPDPDTYVHRSGRTGRAGREGTAVTLFSSDEQRDIVRIERAIGKGFRCR-GSVPSAEAVMAQSATVALKAIDAVGDAVVPYFMDSARKLLASEAAADTELLLAKCLAAISRKS 190
            + IVF +TK++ DEL +G  FK+L++Q LHGD+GQKQRD T+  FR G F+VLVATDVAARGIDI DVDLVVQ+ PP D DTYVHRSGRTGRAGR+GT+V LF   + RDIVRIER++G GF+      PS E+ ++ +A  +  A   + D    +F D+A  LL  E   D + ++A+CLAAISR+S
Sbjct:  471 KTIVFTETKRDADELVSGGVFKSLTAQALHGDVGQKQRDATLAAFRAGAFNVLVATDVAARGIDINDVDLVVQFEPPRDTDTYVHRSGRTGRAGRKGTSVLLFRPYQSRDIVRIERSLGHGFKFELAGPPSIESALSAAAKTSAIACRGIPDETANFFQDAASSLL--EDGEDPQQVVARCLAAISRRS 657          
BLAST of mRNA_P-wetherbeei_contig11982.1.1 vs. uniprot
Match: A0A7S0CDF7_9STRA (RNA helicase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CDF7_9STRA)

HSP 1 Score: 195 bits (495), Expect = 6.390e-56
Identity = 106/189 (56.08%), Postives = 135/189 (71.43%), Query Frame = 0
Query:    3 RAIVFAQTKKECDELAAGNAFKTLSSQVLHGDIGQKQRDVTINQFRKGQFHVLVATDVAARGIDIADVDLVVQYRPPPDPDTYVHRSGRTGRAGREGTAVTLFSSDEQRDIVRIERAIGKGFRCR-GSVPSAEAVMAQSATVALKAIDAVGDAVVPYFMDSARKLLASEAAADTELLLAKCLAAISRKS 190
            + IVF +TK+E DEL +G  FK+L++Q LHGDIGQKQRD T+N FR G F+VLVATDVAARGIDI DVDLV+QY+PP D DT+VHRSGRTGRAG++GT+V LF   E RDIVRIER +G  F+      PS EA +  +A  +  A   V    V YF ++A  LL +E     E ++A+CLAAIS+++
Sbjct:  201 KTIVFTETKREADELVSGGVFKSLTAQALHGDIGQKQRDATLNAFRAGAFNVLVATDVAARGIDINDVDLVIQYQPPRDTDTFVHRSGRTGRAGKKGTSVILFGPYEARDIVRIERGLGHNFKFELVGPPSIEAALNAAAKTSAVACRGVPAETVDYFRNAASDLLETEGMT-AEDIVARCLAAISKRT 388          
BLAST of mRNA_P-wetherbeei_contig11982.1.1 vs. uniprot
Match: A0A7S4R924_9STRA (RNA helicase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R924_9STRA)

HSP 1 Score: 198 bits (503), Expect = 7.350e-56
Identity = 104/189 (55.03%), Postives = 138/189 (73.02%), Query Frame = 0
Query:    3 RAIVFAQTKKECDELAAGNAFKTLSSQVLHGDIGQKQRDVTINQFRKGQFHVLVATDVAARGIDIADVDLVVQYRPPPDPDTYVHRSGRTGRAGREGTAVTLFSSDEQRDIVRIERAIGKGFRCR-GSVPSAEAVMAQSATVALKAIDAVGDAVVPYFMDSARKLLASEAAADTELLLAKCLAAISRKS 190
            + IVF +TK++ DEL +G+ FK+L++Q LHGD+GQKQRD T+  FR G F+VLVATDVAARGIDI DVDLV+Q+ PP D DTYVHRSGRTGRAGR+GT+V LF  ++ RDIV+IER++G GF+      PS EA +  +A  +  A  +V +    +F D+A  LL  E   D + ++A+CLAAISR+S
Sbjct:  405 KTIVFTETKRDADELVSGSIFKSLTAQALHGDVGQKQRDATLAAFRAGAFNVLVATDVAARGIDITDVDLVIQFEPPRDVDTYVHRSGRTGRAGRKGTSVLLFRPNQSRDIVKIERSLGHGFKFELAGPPSIEAALTAAAKTSAIACRSVPEETAKFFTDAAGSLL--ENGEDPQEVVARCLAAISRRS 591          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11982.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CKS6_9STRA1.180e-8272.45RNA helicase (Fragment) n=1 Tax=Tribonema minus Ta... [more]
D8LE98_ECTSI7.720e-7065.97RNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
A0A835ZP19_9STRA3.310e-6165.12RNA helicase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A7S2KUG8_9STRA1.420e-5956.61RNA helicase (Fragment) n=1 Tax=Skeletonema marino... [more]
A0A7S1B3X5_9STRA1.240e-5757.89Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
B8BZG6_THAPS1.460e-5756.08RNA helicase (Fragment) n=1 Tax=Thalassiosira pseu... [more]
A0A7S3ZWQ0_9STRA1.760e-5756.19RNA helicase n=1 Tax=Pelagomonas calceolata TaxID=... [more]
A0A7S2H5C4_9STRA4.590e-5655.56RNA helicase (Fragment) n=1 Tax=Helicotheca tamesi... [more]
A0A7S0CDF7_9STRA6.390e-5656.08RNA helicase n=1 Tax=Proboscia inermis TaxID=42028... [more]
A0A7S4R924_9STRA7.350e-5655.03RNA helicase n=1 Tax=Ditylum brightwellii TaxID=49... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 15..96
e-value: 9.4E-29
score: 111.5
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 2..96
e-value: 5.2E-29
score: 100.8
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 1..138
score: 21.677723
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..187
e-value: 5.1E-45
score: 155.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..124
NoneNo IPR availablePANTHERPTHR47958:SF54DEAD-BOX ATP-DEPENDENT RNA HELICASE 3, CHLOROPLASTIC ISOFORM X1coord: 1..175
NoneNo IPR availablePANTHERPTHR47958ATP-DEPENDENT RNA HELICASE DBP3coord: 1..175
NoneNo IPR availableCDDcd18787SF2_C_DEADcoord: 1..105
e-value: 5.47515E-51
score: 158.825

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11982contigP-wetherbeei_contig11982:7..1778 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11982.1.1mRNA_P-wetherbeei_contig11982.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig11982 7..1778 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig11982.1.1 ID=prot_P-wetherbeei_contig11982.1.1|Name=mRNA_P-wetherbeei_contig11982.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=191bp
GSRAIVFAQTKKECDELAAGNAFKTLSSQVLHGDIGQKQRDVTINQFRKG
QFHVLVATDVAARGIDIADVDLVVQYRPPPDPDTYVHRSGRTGRAGREGT
AVTLFSSDEQRDIVRIERAIGKGFRCRGSVPSAEAVMAQSATVALKAIDA
VGDAVVPYFMDSARKLLASEAAADTELLLAKCLAAISRKSE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase