mRNA_P-wetherbeei_contig11961.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11961.1.1 vs. uniprot
Match: UPI0019B11715 (Nuclear transport factor 2 family protein n=1 Tax=Rhodoferax sp. TaxID=50421 RepID=UPI0019B11715) HSP 1 Score: 216 bits (550), Expect = 1.720e-70 Identity = 105/111 (94.59%), Postives = 107/111 (96.40%), Query Frame = 1 Query: 1 AKGKVQLLAGMANIRVYEDGTPRTRHTTTNIDLAIDEKAGTAKSQCYVTVFQQTSEFPLQVIFSGHYFDDFERADGVWRFKKRLIRHQLVGDMSAHVKAPTKLIEKYKNAE 333 AKGK QLLAGMAN+RVYEDGTPRTRHTTTNIDL IDE AGTAKSQCYVTVFQQTSEFPLQVIFSGHYFDDFERADGVWRFKKRLIRHQLVGDM AHVKAPTKLIEKY+NAE Sbjct: 43 AKGKDQLLAGMANVRVYEDGTPRTRHTTTNIDLKIDEVAGTAKSQCYVTVFQQTSEFPLQVIFSGHYFDDFERADGVWRFKKRLIRHQLVGDMRAHVKAPTKLIEKYENAE 153
BLAST of mRNA_P-wetherbeei_contig11961.1.1 vs. uniprot
Match: A0A293NKH0_9GAMM (SnoaL-like domain-containing protein n=2 Tax=Porticoccaceae bacterium TaxID=2026782 RepID=A0A293NKH0_9GAMM) HSP 1 Score: 139 bits (351), Expect = 2.990e-40 Identity = 59/102 (57.84%), Postives = 81/102 (79.41%), Query Frame = 1 Query: 7 GKVQLLAGMANIRVYEDGTPRTRHTTTNIDLAIDEKAGTAKSQCYVTVFQQTSEFPLQVIFSGHYFDDFERADGVWRFKKRLIRHQLVGDMSAHVKAPTKLI 312 G Q+L ++ +R+YEDGTPRT+H +N+DL IDE +AKSQCYVTVFQQT++FPLQ IF GHYFD F+R +GVW+F +R+IR+ +VGD+SAH+ P ++ Sbjct: 45 GTQQVLDALSTVRIYEDGTPRTKHIVSNLDLEIDEVNNSAKSQCYVTVFQQTNDFPLQAIFCGHYFDRFQRVEGVWQFSQRIIRYMMVGDLSAHLNEPESVV 146
BLAST of mRNA_P-wetherbeei_contig11961.1.1 vs. uniprot
Match: A0A7Y3M6X1_9DELT (Nuclear transport factor 2 family protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7Y3M6X1_9DELT) HSP 1 Score: 137 bits (344), Expect = 3.460e-39 Identity = 61/91 (67.03%), Postives = 76/91 (83.52%), Query Frame = 1 Query: 40 IRVYEDGTPRTRHTTTNIDLAIDEKAGTAKSQCYVTVFQQTSEFPLQVIFSGHYFDDFERADGVWRFKKRLIRHQLVGDMSAHVKAPTKLI 312 I +YEDGTPRT+H +N+DLAIDE AGTA ++ Y+T++QQT EFPLQV F GHYFDDFER DG WRF KR+IR+ LVGD+SAH++AP +I Sbjct: 56 IIIYEDGTPRTKHFVSNVDLAIDEAAGTATAESYLTLYQQTDEFPLQVCFVGHYFDDFERVDGSWRFAKRVIRNSLVGDLSAHLRAPGSVI 146
BLAST of mRNA_P-wetherbeei_contig11961.1.1 vs. uniprot
Match: A0A3C0KXJ9_9GAMM (Nuclear transport factor 2 family protein n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3C0KXJ9_9GAMM) HSP 1 Score: 119 bits (299), Expect = 2.090e-32 Identity = 57/101 (56.44%), Postives = 70/101 (69.31%), Query Frame = 1 Query: 1 AKGKVQLLAGMANIRVYEDGTPRTRHTTTNIDLAIDEKAGTAKSQCYVTVFQQTSEFPLQVIFSGHYFDDFERADGVWRFKKRLIRHQLVGDMSAHVKAPT 303 A+G+V M N+ +YEDGTPRT+H TN+ L ID+ AGTA CYVTV+QQT EFPLQ IF G YFD F A W F +R IR+ L+GDM AH+K P+ Sbjct: 37 AEGRVPGPESMNNMILYEDGTPRTKHVITNLTLDIDDAAGTASGHCYVTVYQQTPEFPLQAIFVGEYFDTFLHAAQGWAFSQREIRNSLIGDMRAHLKTPS 137
BLAST of mRNA_P-wetherbeei_contig11961.1.1 vs. uniprot
Match: A0A2D7G2J7_9GAMM (SnoaL-like domain-containing protein n=2 Tax=unclassified Gammaproteobacteria TaxID=33811 RepID=A0A2D7G2J7_9GAMM) HSP 1 Score: 117 bits (292), Expect = 2.550e-31 Identity = 50/89 (56.18%), Postives = 66/89 (74.16%), Query Frame = 1 Query: 37 NIRVYEDGTPRTRHTTTNIDLAIDEKAGTAKSQCYVTVFQQTSEFPLQVIFSGHYFDDFERADGVWRFKKRLIRHQLVGDMSAHVKAPT 303 N+ +YEDGTPRT+H +N+ + +D A A+ YVTV+QQ SE PLQVIF+G YFD+FER +G WRFK R IRH L+GD+ H+K P+ Sbjct: 49 NVILYEDGTPRTKHIVSNVTIEVDAAADCARGHSYVTVYQQVSERPLQVIFAGEYFDEFERQEGAWRFKSRDIRHPLIGDLRGHLKLPS 137
BLAST of mRNA_P-wetherbeei_contig11961.1.1 vs. uniprot
Match: A0A1V4E9X2_9ACTN (SnoaL-like domain-containing protein n=1 Tax=Streptomyces sp. GKU 895 TaxID=1662404 RepID=A0A1V4E9X2_9ACTN) HSP 1 Score: 106 bits (265), Expect = 3.310e-27 Identity = 51/91 (56.04%), Postives = 68/91 (74.73%), Query Frame = 1 Query: 37 NIRVYEDGTPRTRHTTTNIDLAIDEKAGTAKSQCYVTVFQQTSEFPLQVIFSGHYFDDFERADGVWRFKKRLIRHQLVGDMSAHVKA-PTK 306 ++ +YEDGTPRT+H TTNI + I E+AGTA ++ YVTVFQ +FPLQ + +G Y D FERADG WRF +R +R LVGD+S H++ PT+ Sbjct: 59 SVILYEDGTPRTQHVTTNIAVDIHEEAGTAAARSYVTVFQALPDFPLQPVAAGRYSDRFERADGHWRFTERRVRIHLVGDVSRHLRGQPTR 149
BLAST of mRNA_P-wetherbeei_contig11961.1.1 vs. uniprot
Match: A0A7X4IV39_9RHOB (Nuclear transport factor 2 family protein n=1 Tax=Boseongicola sp. SB0675_bin_26 TaxID=2604849 RepID=A0A7X4IV39_9RHOB) HSP 1 Score: 106 bits (264), Expect = 3.760e-27 Identity = 49/98 (50.00%), Postives = 67/98 (68.37%), Query Frame = 1 Query: 4 KGKVQLLAGMAN-IRVYEDGTPRTRHTTTNIDLAIDEKAGTAKSQCYVTVFQQTSEFPLQVIFSGHYFDDFERADGVWRFKKRLIRHQLVGDMSAHVK 294 +G+ +L + + + +Y+DGTPRTRH +TNI+L IDE AG AK Q YV V+QQT FPLQ I+SG Y D+F R DG W++ IR GD+S H++ Sbjct: 44 RGREELFKNVVSRVIIYDDGTPRTRHLSTNIELEIDEDAGRAKCQRYVMVYQQTDGFPLQAIYSGRYLDEFTRQDGGWQYSSCTIRDPFFGDVSRHIR 141
BLAST of mRNA_P-wetherbeei_contig11961.1.1 vs. uniprot
Match: A0A5N0UZT8_9PSEU (Nuclear transport factor 2 family protein n=1 Tax=Amycolatopsis acidicola TaxID=2596893 RepID=A0A5N0UZT8_9PSEU) HSP 1 Score: 105 bits (262), Expect = 8.210e-27 Identity = 46/83 (55.42%), Postives = 62/83 (74.70%), Query Frame = 1 Query: 46 VYEDGTPRTRHTTTNIDLAIDEKAGTAKSQCYVTVFQQTSEFPLQVIFSGHYFDDFERADGVWRFKKRLIRHQLVGDMSAHVK 294 V+EDGTPRT+H TTN+ + +DE AGTA ++ YVTV Q ++FPLQ I +G Y+D FER DGVWRF R ++ VGD+S H++ Sbjct: 59 VHEDGTPRTQHVTTNVQIEVDELAGTASARSYVTVLQAATDFPLQTIVAGRYYDRFERLDGVWRFVDRRVKITHVGDVSRHLR 141
BLAST of mRNA_P-wetherbeei_contig11961.1.1 vs. uniprot
Match: A0A285DNP8_9ACTN (SnoaL-like protein n=1 Tax=Streptomyces sp. TLI_55 TaxID=1938861 RepID=A0A285DNP8_9ACTN) HSP 1 Score: 105 bits (261), Expect = 1.200e-26 Identity = 46/86 (53.49%), Postives = 65/86 (75.58%), Query Frame = 1 Query: 37 NIRVYEDGTPRTRHTTTNIDLAIDEKAGTAKSQCYVTVFQQTSEFPLQVIFSGHYFDDFERADGVWRFKKRLIRHQLVGDMSAHVK 294 ++ +YEDGTPRT+H TTN+ + +DE+AGTA ++ YVTVFQ +FPLQ + +G Y D FER DG WRF +R ++ LVGD+S H++ Sbjct: 59 SVILYEDGTPRTQHVTTNLAVQVDEEAGTAAARSYVTVFQALPDFPLQAVAAGRYRDRFERRDGRWRFTERRVQIHLVGDVSRHLR 144
BLAST of mRNA_P-wetherbeei_contig11961.1.1 vs. uniprot
Match: UPI0018813DC5 (nuclear transport factor 2 family protein n=1 Tax=Streptomyces justiciae TaxID=2780140 RepID=UPI0018813DC5) HSP 1 Score: 103 bits (258), Expect = 3.400e-26 Identity = 47/87 (54.02%), Postives = 65/87 (74.71%), Query Frame = 1 Query: 37 NIRVYEDGTPRTRHTTTNIDLAIDEKAGTAKSQCYVTVFQQTSEFPLQVIFSGHYFDDFERADGVWRFKKRLIRHQLVGDMSAHVKA 297 ++ +YEDGTPRT+H TTNI + +DE+AGTA ++ YV+V Q +FPLQ + +G Y D FER DG WRF +R +R LVGD+S H++A Sbjct: 59 SVILYEDGTPRTQHVTTNIIVDVDEEAGTAAARSYVSVLQALPDFPLQPVAAGRYSDRFERRDGRWRFTERRVRIHLVGDVSRHLRA 145 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11961.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11961.1.1 >prot_P-wetherbeei_contig11961.1.1 ID=prot_P-wetherbeei_contig11961.1.1|Name=mRNA_P-wetherbeei_contig11961.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=102bp MANIRVYEDGTPRTRHTTTNIDLAIDEKAGTAKSQCYVTVFQQTSEFPLQback to top mRNA from alignment at P-wetherbeei_contig11961:1..336+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11961.1.1 ID=mRNA_P-wetherbeei_contig11961.1.1|Name=mRNA_P-wetherbeei_contig11961.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=336bp|location=Sequence derived from alignment at P-wetherbeei_contig11961:1..336+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11961:1..336+ >mRNA_P-wetherbeei_contig11961.1.1 ID=mRNA_P-wetherbeei_contig11961.1.1|Name=mRNA_P-wetherbeei_contig11961.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=306bp|location=Sequence derived from alignment at P-wetherbeei_contig11961:1..336+ (Phaeothamnion wetherbeei SAG_119_79)back to top |