prot_P-wetherbeei_contig11959.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig11959.2.1
Unique Nameprot_P-wetherbeei_contig11959.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length313
Homology
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BLAST of mRNA_P-wetherbeei_contig11959.2.1 vs. uniprot
Match: D8LGE3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGE3_ECTSI)

HSP 1 Score: 77.4 bits (189), Expect = 3.130e-12
Identity = 90/306 (29.41%), Postives = 126/306 (41.18%), Query Frame = 0 
Query:    4 NLLADTPLSLLFAATNLAFA-AFDEGRTKVASEVLLCVFGSATGARLALER-PEVLPMMQTGLQHELAALRRLTIGVIHAAMAD---------------EPRGRAARCRVLLATPLPPLLVRAVADPSIAVAQAATDCLVDMLRFSQSTDAEALTQPPPHPPQSAGDAGXASASAAGPSPMVVDDTGAGGSAVVASSPVVAAAVASVACDAVLTAVAEAAATATDSTVTLRLAELAARCAALSDSVFEAARQRGALAPLLATAHESDDVMLRLNALELLELLADTPAGSAFLFGQGHVAALLRLAG 292
             LL D    LLF A + ++  A DE + +     LL VFGS  G  +  +   E++     GL H  A +R LT   + A                   E R RA RCR LL  PL P LV A+ D     +Q   D LV +    +  D  A   P      + G A     +  G     + +  AG +A  A++P                               LR A++A R  + SDS F AA   GAL+ +     ++ DV+L+LNAL+LL+ +A T  G+  L   GH+  LL  AG
Sbjct:   62 GLLKDVEPRLLFLAVDFSYGQAGDEVKRRAVETALLSVFGSTVGPEIYQQNGTELVAFFLAGLCHPAAGVRTLTATAMGALXXXXXXXXXXXXXXXXXXEGRERAERCRTLLQPPLLPALVAALGDGDTGASQQVADTLVALC---EEADGRAAVTP-----TTGGRATGCRRAVMGALASQIGEVVAGLTARQAATP------------------------------KLRFADIATRLMSASDSAFAAAVDAGALSLVTDLTEDASDVLLQLNALDLLDQVASTAGGALHLVANGHLDRLLVSAG 329
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BLAST of mRNA_P-wetherbeei_contig11959.2.1 vs. uniprot
Match: A0A6H5KYX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYX7_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 4.920e-6
Identity = 34/77 (44.16%), Postives = 47/77 (61.04%), Query Frame = 0 
Query:  216 LRLAELAARCAALSDSVFEAARQRGALAPLLATAHESDDVMLRLNALELLELLADTPAGSAFLFGQGHVAALLRLAG 292
            LR A++A R  + SDS F AA   GALA +     ++ DV+L+LNAL+LL+ +A T  G+  L   GH+  LL  AG
Sbjct:  170 LRFADIATRLMSASDSAFAAAVDSGALALVTDLTEDASDVLLQLNALDLLDRVASTAGGARHLVANGHLDKLLVAAG 246
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11959.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LGE3_ECTSI3.130e-1229.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KYX7_9PHAE4.920e-644.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 136..168
IPR01953826S proteasome non-ATPase regulatory subunit 5PANTHERPTHR1355426S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 5-RELATEDcoord: 3..135
coord: 203..290
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 32..290

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11959contigP-wetherbeei_contig11959:1063..2001 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11959.2.1mRNA_P-wetherbeei_contig11959.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig11959 792..2001 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig11959.2.1 ID=prot_P-wetherbeei_contig11959.2.1|Name=mRNA_P-wetherbeei_contig11959.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=313bp
MVANLLADTPLSLLFAATNLAFAAFDEGRTKVASEVLLCVFGSATGARLA
LERPEVLPMMQTGLQHELAALRRLTIGVIHAAMADEPRGRAARCRVLLAT
PLPPLLVRAVADPSIAVAQAATDCLVDMLRFSQSTDAEALTQPPPHPPQS
AGDAGDASASAAGPSPMVVDDTGAGGSAVVASSPVVAAAVASVACDAVLT
AVAEAAATATDSTVTLRLAELAARCAALSDSVFEAARQRGALAPLLATAH
ESDDVMLRLNALELLELLADTPAGSAFLFGQGHVAALLRLAGGDDGRGGG
NGGGGGCVFFGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019538PSMD5
IPR016024ARM-type_fold