mRNA_P-wetherbeei_contig11924.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11924.1.1 vs. uniprot
Match: A0A2R6W8H5_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6W8H5_MARPO) HSP 1 Score: 92.0 bits (227), Expect = 6.050e-17 Identity = 63/167 (37.72%), Postives = 75/167 (44.91%), Query Frame = 1 Query: 133 WFLLTSSNFSKAAWGTMQKGASQLSLKSYEMGVLFLPDLLGPALCPPFCCTPGEAIAALPLAYGGLCAGHSDVDGEVPPLLPSVADTPAATATGXXXXXXXXXXXXXXXXXXXXXXXXXXXDCWSLRERGLPLDRLPVPYRLPPPRYGPRDRPWVWDVDHPEPDSHG 633 WFLLTSSN SKAAWG++QK SQL ++SYE+GVLFLP + A+ F CT G A HS + A+T + W P RLPVPY LPPPRYGPRD PW WD + +PD G Sbjct: 379 WFLLTSSNLSKAAWGSLQKQNSQLMIRSYELGVLFLPSTVQRAVGSTFSCT-GNA--------------HSK----------EIGRAEASTFSENEYQQLRGRPGRLVTTN------------WEDDPSFEPFARLPVPYSLPPPRYGPRDVPWSWDCVYTKPDIFG 508
BLAST of mRNA_P-wetherbeei_contig11924.1.1 vs. uniprot
Match: A0A2R6W8I3_MARPO (Uncharacterized protein n=3 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6W8I3_MARPO) HSP 1 Score: 92.0 bits (227), Expect = 7.620e-17 Identity = 63/167 (37.72%), Postives = 75/167 (44.91%), Query Frame = 1 Query: 133 WFLLTSSNFSKAAWGTMQKGASQLSLKSYEMGVLFLPDLLGPALCPPFCCTPGEAIAALPLAYGGLCAGHSDVDGEVPPLLPSVADTPAATATGXXXXXXXXXXXXXXXXXXXXXXXXXXXDCWSLRERGLPLDRLPVPYRLPPPRYGPRDRPWVWDVDHPEPDSHG 633 WFLLTSSN SKAAWG++QK SQL ++SYE+GVLFLP + A+ F CT G A HS + A+T + W P RLPVPY LPPPRYGPRD PW WD + +PD G Sbjct: 553 WFLLTSSNLSKAAWGSLQKQNSQLMIRSYELGVLFLPSTVQRAVGSTFSCT-GNA--------------HSK----------EIGRAEASTFSENEYQQLRGRPGRLVTTN------------WEDDPSFEPFARLPVPYSLPPPRYGPRDVPWSWDCVYTKPDIFG 682
BLAST of mRNA_P-wetherbeei_contig11924.1.1 vs. uniprot
Match: A0A2K1JYQ2_PHYPA (Uncharacterized protein n=9 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JYQ2_PHYPA) HSP 1 Score: 85.5 bits (210), Expect = 1.210e-14 Identity = 63/172 (36.63%), Postives = 78/172 (45.35%), Query Frame = 1 Query: 133 WFLLTSSNFSKAAWGTMQKGASQLSLKSYEMGVLFLPDLLGP-ALCPPFCCTPGEAIAALPLAYGGLCAGHSDVDGEVPPLLPSVADTPAATATGXXXXXXXXXXXXXXXXXXXXXXXXXXXDCW-SLRERGLPLD---RLPVPYRLPPPRYGPRDRPWVWDVDHPEPDSHG 633 WFLLTSSN SKAAWG +QK SQL ++SYE+GVLFLP L+G + PF CT +I L + + DG L T T + W S +D RLP+PY LPP +Y P+D PW WD + EPD G Sbjct: 588 WFLLTSSNLSKAAWGVLQKNGSQLMIRSYELGVLFLPSLVGNNSNVTPFSCTYSSSILPRELQ-------NREDDGGKRQL----RHTKLVTLS------------------------------WKSSNHEKSDMDIFVRLPIPYALPPVKYDPKDIPWSWDRQYREPDMFG 718
BLAST of mRNA_P-wetherbeei_contig11924.1.1 vs. uniprot
Match: A0A453BD03_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453BD03_AEGTS) HSP 1 Score: 80.9 bits (198), Expect = 3.010e-13 Identity = 61/176 (34.66%), Postives = 77/176 (43.75%), Query Frame = 1 Query: 127 VDWFLLTSSNFSKAAWGTMQKGASQLSLKSYEMGVLFLPDLLGPALCPPFCCTPGE----AIAALPLAYGGLCAGHSDVDGEVPPLLPSVADTPAATATGXXXXXXXXXXXXXXXXXXXXXXXXXXXDCWSLRERGLP---LDRLPVPYRLPPPRYGPRDRPWVWDVDHPEPDSHG 633 + WFLLTSSN SKAAWG +QK +QL ++SYE+GVLFLP L P F CT L L++ + + PL T A G CW E P + RLPVPY++PP YGP D PW WD + + D +G Sbjct: 310 IAWFLLTSSNLSKAAWGALQKNNTQLMIRSYELGVLFLPKTLQSV--PQFSCTDKSRSNLVTTNLSLSFEYYGYANMFLRSSFIPL----TYTQDKLALGKNIKTKLVTL------------------CWKGDEEKDPSAEVVRLPVPYQVPPQLYGPEDVPWSWDRRYTKKDVYG 461
BLAST of mRNA_P-wetherbeei_contig11924.1.1 vs. uniprot
Match: A0A8J9WME4_9CHLO (Tyrosyl-DNA phosphodiesterase 1 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WME4_9CHLO) HSP 1 Score: 75.9 bits (185), Expect = 1.750e-11 Identity = 56/171 (32.75%), Postives = 71/171 (41.52%), Query Frame = 1 Query: 133 WFLLTSSNFSKAAWGTMQKGASQLSLKSYEMGVLFLPDLLGPALCPPFCCTPGEAIAALPLAYGGLCAGHSDVDGEVPPLLPSVADTPAATATGXXXXXXXXXXXXXXXXXXXXXXXXXXXDCWSLRERGLPLDRLPVPYRLPPPRYGPRDRPWVWDVDHPEPDSHGYSFG 645 +FLLTS N SKAAWG +QK SQL + YE+GVL LP L E +G C S + PS + + AT +L G+ LPVPY++PP RYGP+DRPW+ V P DS G + G Sbjct: 477 YFLLTSHNLSKAAWGALQKKNSQLYIMHYELGVLLLPSL--------------EERYRSHRHFGFSCTQPSQMPSPAAAAQPSRVEFWVSGATAAADESSS-----------------------TLLSAGIERLMLPVPYQVPPVRYGPQDRPWMTGVHFPGLDSQGLTLG 610
BLAST of mRNA_P-wetherbeei_contig11924.1.1 vs. uniprot
Match: UPI000EAAF01A (tyrosyl-DNA phosphodiesterase 1 isoform X2 n=1 Tax=Zonotrichia albicollis TaxID=44394 RepID=UPI000EAAF01A) HSP 1 Score: 75.5 bits (184), Expect = 2.160e-11 Identity = 50/170 (29.41%), Postives = 68/170 (40.00%), Query Frame = 1 Query: 127 VDWFLLTSSNFSKAAWGTMQKGASQLSLKSYEMGVLFLPDLLGPALCPPFCCTPGEAIAALPLAYGGLCAGHSDVDGEVPPLLPSVADTPAATATGXXXXXXXXXXXXXXXXXXXXXXXXXXXDCWSLRERGLPLDRLPVPYRLPPPRYGPRDRPWVWDVDHPE-PDSHG 633 + WFL+TS+N SKAAWG ++K SQL ++SYE+GVLFLP G L G+ V E L ER PVPY LPP +YG +D+PW+W++ + + PD+HG Sbjct: 445 IAWFLVTSANLSKAAWGALEKNGSQLMIRSYELGVLFLPSAFG------------------------LDKGYFHVGRE------------------------------------------------KLPERKESATHFPVPYDLPPEKYGSKDQPWIWNIPYTDAPDTHG 542
BLAST of mRNA_P-wetherbeei_contig11924.1.1 vs. uniprot
Match: A0A5D6XVY7_9STRA (Carbonic anhydrase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVY7_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 2.670e-10 Identity = 47/102 (46.08%), Postives = 54/102 (52.94%), Query Frame = 1 Query: 100 DAAGGALVAVDWFLLTSSNFSKAAWGTMQKGASQLSLKSYEMGVLFLPDLLGPALCPPFCCTPGEAIAALPLAYGGLCAGHSDVDGEVPPLLPSVADTPAAT 405 DAA G L DW +LTSSN SKAAWG +QKG SQ ++SYE+GVLFLP LL T G +A L G A GE P +LP P T Sbjct: 645 DAAAGTL---DWAILTSSNLSKAAWGALQKGDSQFLIRSYELGVLFLPQLLRK--------TSGSDSSASKLVVLGSKAADRSRAGEAPFVLPLPYSFPLKT 735
BLAST of mRNA_P-wetherbeei_contig11924.1.1 vs. uniprot
Match: L5JQT3_PTEAL (Tyrosyl-DNA phosphodiesterase 1 n=5 Tax=Pteropodinae TaxID=77225 RepID=L5JQT3_PTEAL) HSP 1 Score: 72.0 bits (175), Expect = 3.460e-10 Identity = 55/200 (27.50%), Postives = 78/200 (39.00%), Query Frame = 1 Query: 127 VDWFLLTSSNFSKAAWGTMQKGASQLSLKSYEMGVLFLPDLLGPALCPPFCCTPGEAIA-----ALPLAYGGLCA--------------GHSDVDGEVPPLLPSVADTPAATATGXXXXXXXXXXXXXXXXXXXXXXXXXXX------DCWSLRERGL-----PLDRLPVPYRLPPPRYGPRDRPWVWDVDHPE-PDSHG 633 + WFL+TS+N SKAAWG ++K +QL ++SYE+GVLFLP P C E LP+ A GH LP D P + + ++++ P PVPY LPP YG +DRPW+W++ + + PD+HG Sbjct: 507 IAWFLVTSANLSKAAWGALEKNGTQLMIRSYELGVLFLPSAFASK---PLCILLLEIFVDRRSVTLPIHVKPCRAKSRGLGYVIRAWFDGHKSTQQRKARSLPECQDNPQQEPGAGQCLRHGENKADVSSTRSRAQAQRWKKKAVTGLESFKVKQKFFSGSQEPAASFPVPYDLPPELYGSKDRPWIWNIPYVKAPDTHG 703
BLAST of mRNA_P-wetherbeei_contig11924.1.1 vs. uniprot
Match: A0A564Z588_HYMDI (zf-CCHH domain-containing protein n=1 Tax=Hymenolepis diminuta TaxID=6216 RepID=A0A564Z588_HYMDI) HSP 1 Score: 71.6 bits (174), Expect = 3.730e-10 Identity = 52/172 (30.23%), Postives = 62/172 (36.05%), Query Frame = 1 Query: 127 VDWFLLTSSNFSKAAWGTMQKGASQLSLKSYEMGVLFLPDLLGPALCPPFCCTPGEAIAALPLAYGGLCAGHSDVDGEVPPLLPSVADTPAATATGXXXXXXXXXXXXXXXXXXXXXXXXXXXDCWSLRERGLPLDRLPVPYRLPPPRYGPRDRPWVWDVDHPEPDSHGYSF 642 V WFLLTSSN SKAAWG Q +Q ++SYE+GVLF P++ +T A AT L PVPY+LPP Y D PWVWDV H EPDSHG ++ Sbjct: 401 VAWFLLTSSNLSKAAWGCYQMNKTQFMIRSYELGVLFTPEIN--------------------------------------------ENTSAKPAT---------------------------------------LSDFPVPYKLPPVPYDVDDEPWVWDVPHREPDSHGSTW 489
BLAST of mRNA_P-wetherbeei_contig11924.1.1 vs. uniprot
Match: A0A7L3LN40_9CHAR (TYDP1 phosphodiesterase (Fragment) n=1 Tax=Turnix velox TaxID=2529409 RepID=A0A7L3LN40_9CHAR) HSP 1 Score: 71.6 bits (174), Expect = 4.290e-10 Identity = 49/170 (28.82%), Postives = 69/170 (40.59%), Query Frame = 1 Query: 127 VDWFLLTSSNFSKAAWGTMQKGASQLSLKSYEMGVLFLPDLLGPALCPPFCCTPGEAIAALPLAYGGLCAGHSDVDGEVPPLLPSVADTPAATATGXXXXXXXXXXXXXXXXXXXXXXXXXXXDCWSLRERGLPLDRLPVPYRLPPPRYGPRDRPWVWDVDHPE-PDSHG 633 + WFL+TS+N SKAAWG ++K +QL ++SYE+GVLFLP G L G+ V G+V +G PVPY LPP RYG +D+PW+W++ + + PD+HG Sbjct: 504 IAWFLVTSANLSKAAWGALEKNGTQLMIRSYELGVLFLPSAFG------------------------LEKGYFHVSGKV--------------FSGSHGSAKY----------------------------------FPVPYDLPPERYGSKDQPWIWNIPYTDAPDTHG 601 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11924.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11924.1.1 >prot_P-wetherbeei_contig11924.1.1 ID=prot_P-wetherbeei_contig11924.1.1|Name=mRNA_P-wetherbeei_contig11924.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=159bp MQKGASQLSLKSYEMGVLFLPDLLGPALCPPFCCTPGEAIAALPLAYGGLback to top mRNA from alignment at P-wetherbeei_contig11924:2..1234+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11924.1.1 ID=mRNA_P-wetherbeei_contig11924.1.1|Name=mRNA_P-wetherbeei_contig11924.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1233bp|location=Sequence derived from alignment at P-wetherbeei_contig11924:2..1234+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11924:2..1234+ >mRNA_P-wetherbeei_contig11924.1.1 ID=mRNA_P-wetherbeei_contig11924.1.1|Name=mRNA_P-wetherbeei_contig11924.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=477bp|location=Sequence derived from alignment at P-wetherbeei_contig11924:2..1234+ (Phaeothamnion wetherbeei SAG_119_79)back to top |